RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 FNBP4Q8N3X1 1017 aaPredicted RBP13.26□□□□□ -0.29
SND1-201ENST00000354725 SSH1Q8WYL5 1049 aa13.26□□□□□ -0.29
SND1-201ENST00000354725 ATRNO75882 1429 aa13.26□□□□□ -0.29
SND1-201ENST00000354725 POLD1P28340 1107 aa13.26□□□□□ -0.29
SND1-201ENST00000354725 ABTB2Q8N961 1025 aa13.26□□□□□ -0.29
SND1-201ENST00000354725 ZBTB9Q96C00 473 aa13.26□□□□□ -0.29
SND1-201ENST00000354725 N4BP2Q86UW6 1770 aaPredicted RBP13.26□□□□□ -0.29
SND1-201ENST00000354725 COL5A2P05997 1499 aaPredicted RBP13.26□□□□□ -0.29
SND1-201ENST00000354725 CDK12Q9NYV4 1490 aaPredicted RBP13.26□□□□□ -0.29
SND1-201ENST00000354725 BRD1O95696 1058 aa13.26□□□□□ -0.29
SND1-201ENST00000354725 CBX1P83916 185 aa13.26□□□□□ -0.29
SND1-201ENST00000354725 CABLES1Q8TDN4 633 aa13.26□□□□□ -0.29
SND1-201ENST00000354725 DDX19BQ9UMR2 479 aa13.26□□□□□ -0.29
SND1-201ENST00000354725 PARP4Q9UKK3 1724 aaKnown RBP13.25□□□□□ -0.29
SND1-201ENST00000354725 SH3BP1Q9Y3L3 701 aa13.25□□□□□ -0.29
SND1-201ENST00000354725 EP400NLQ6ZTU2 488 aa13.25□□□□□ -0.29
SND1-201ENST00000354725 BCL2L13Q9BXK5 485 aa13.25□□□□□ -0.29
SND1-201ENST00000354725 GCP02774 474 aa13.25□□□□□ -0.29
SND1-201ENST00000354725 ARHGEF25Q86VW2 580 aa13.25□□□□□ -0.29
SND1-201ENST00000354725 ISY1Q9ULR0 285 aaKnown RBP13.25□□□□□ -0.29
SND1-201ENST00000354725 STK24Q9Y6E0 443 aa13.25□□□□□ -0.29
SND1-201ENST00000354725 FAM83GA6ND36 823 aa13.24□□□□□ -0.29
SND1-201ENST00000354725 NUCB1Q02818 461 aa13.24□□□□□ -0.29
SND1-201ENST00000354725 EXOSC9Q06265 439 aaKnown RBP13.24□□□□□ -0.29
SND1-201ENST00000354725 PIK3R5Q8WYR1 880 aa13.24□□□□□ -0.29
SND1-201ENST00000354725 TSR2Q969E8 191 aaKnown RBP13.24□□□□□ -0.29
SND1-201ENST00000354725 KIAA0232Q92628 1395 aa13.24□□□□□ -0.29
SND1-201ENST00000354725 KIF24Q5T7B8 1368 aa13.24□□□□□ -0.29
SND1-201ENST00000354725 NEUROD2Q15784 382 aa13.24□□□□□ -0.29
SND1-201ENST00000354725 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.298e-7■■■□□ 17.7
SND1-201ENST00000354725 SNX21Q969T3 373 aa13.24□□□□□ -0.29
SND1-201ENST00000354725 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
SND1-201ENST00000354725 KCNJ4P48050 445 aa13.23□□□□□ -0.29
SND1-201ENST00000354725 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.29
SND1-201ENST00000354725 RTL1A6NKG5 1358 aa13.23□□□□□ -0.29
SND1-201ENST00000354725 BRWD3Q6RI45 1802 aa13.23□□□□□ -0.29
SND1-201ENST00000354725 KIF16BQ96L93 1317 aa13.23□□□□□ -0.29
SND1-201ENST00000354725 YY1AP1Q9H869 796 aa13.22□□□□□ -0.29
SND1-201ENST00000354725 EP400Q96L91 3159 aa13.22□□□□□ -0.29
SND1-201ENST00000354725 NUTM2GQ5VZR2 741 aa13.22□□□□□ -0.29
SND1-201ENST00000354725 GEMIN8Q9NWZ8 242 aaKnown RBP13.22□□□□□ -0.29
SND1-201ENST00000354725 NLRP6P59044 892 aa13.22□□□□□ -0.29
SND1-201ENST00000354725 C22orf23Q9BZE7 217 aa13.22□□□□□ -0.29
SND1-201ENST00000354725 PKD1L3Q7Z443 1732 aa13.22□□□□□ -0.29
SND1-201ENST00000354725 MSNP26038 577 aaKnown RBP13.21□□□□□ -0.29
SND1-201ENST00000354725 ARID4AP29374 1257 aaPredicted RBP13.21□□□□□ -0.29
SND1-201ENST00000354725 KIF2CQ99661 725 aa13.21□□□□□ -0.29
SND1-201ENST00000354725 GGNBP2Q9H3C7 697 aa13.21□□□□□ -0.29
SND1-201ENST00000354725 UPF2Q9HAU5 1272 aaKnown RBP13.21□□□□□ -0.29
SND1-201ENST00000354725 LRRC37A3O60309 1634 aa13.21□□□□□ -0.29
SND1-201ENST00000354725 MCM4P33991 863 aa13.21□□□□□ -0.29
SND1-201ENST00000354725 NOB1Q9ULX3 412 aaKnown RBP13.21□□□□□ -0.29
SND1-201ENST00000354725 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
SND1-201ENST00000354725 ZNF853P0CG23 659 aa13.21□□□□□ -0.3
SND1-201ENST00000354725 TMEM57Q8N5G2 664 aa13.21□□□□□ -0.3
SND1-201ENST00000354725 ARHGAP45Q92619 1136 aa13.21□□□□□ -0.3
SND1-201ENST00000354725 FCHSD2O94868 740 aa13.2□□□□□ -0.3
SND1-201ENST00000354725 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
SND1-201ENST00000354725 KCNH5Q8NCM2 988 aa13.2□□□□□ -0.3
SND1-201ENST00000354725 SMC4Q9NTJ3 1288 aa13.2□□□□□ -0.3
SND1-201ENST00000354725 ABCC4O15439 1325 aa13.2□□□□□ -0.3
SND1-201ENST00000354725 APBB1O00213 710 aa13.19□□□□□ -0.3
SND1-201ENST00000354725 FBLN1P23142 703 aa13.19□□□□□ -0.3
SND1-201ENST00000354725 IRF6O14896 467 aa13.19□□□□□ -0.3
SND1-201ENST00000354725 SLKQ9H2G2 1235 aaPredicted RBP13.19□□□□□ -0.3
SND1-201ENST00000354725 DISP2A7MBM2 1401 aa13.18□□□□□ -0.3
SND1-201ENST00000354725 MAP3K19Q56UN5 1328 aa13.18□□□□□ -0.3
SND1-201ENST00000354725 BMP2KLQ5H9B9 411 aa13.18□□□□□ -0.3
SND1-201ENST00000354725 CHMP5Q9NZZ3 219 aa13.18□□□□□ -0.3
SND1-201ENST00000354725 ZBTB7BO15156 539 aaPredicted RBP13.18□□□□□ -0.3
SND1-201ENST00000354725 POLKQ9UBT6 870 aa13.18□□□□□ -0.3
SND1-201ENST00000354725 CLEC17AQ6ZS10 378 aa13.17□□□□□ -0.3
SND1-201ENST00000354725 ZNF513Q8N8E2 541 aaPredicted RBP13.17□□□□□ -0.3
SND1-201ENST00000354725 COG3Q96JB2 828 aa13.17□□□□□ -0.3
SND1-201ENST00000354725 RGS12O14924 1447 aa13.17□□□□□ -0.3
SND1-201ENST00000354725 TRAK2O60296 914 aa13.17□□□□□ -0.3
SND1-201ENST00000354725 ATP2B3Q16720 1220 aa13.17□□□□□ -0.3
SND1-201ENST00000354725 CARD10Q9BWT7 1032 aa13.16□□□□□ -0.3
SND1-201ENST00000354725 DIAPH1O60610 1272 aaKnown RBP13.16□□□□□ -0.3
SND1-201ENST00000354725 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
SND1-201ENST00000354725 ADAMTS7Q9UKP4 1686 aa13.15□□□□□ -0.3
SND1-201ENST00000354725 SMARCA5O60264 1052 aaPredicted RBP13.15□□□□□ -0.3
SND1-201ENST00000354725 CCDC173Q0VFZ6 552 aa13.15□□□□□ -0.3
SND1-201ENST00000354725 IP6K1Q92551 441 aa13.15□□□□□ -0.3
SND1-201ENST00000354725 PPP1R9BQ96SB3 815 aa13.15□□□□□ -0.3
SND1-201ENST00000354725 MAFGO15525 162 aa13.15□□□□□ -0.3
SND1-201ENST00000354725 HOXC9P31274 260 aa13.15□□□□□ -0.3
SND1-201ENST00000354725 SASS6Q6UVJ0 657 aa13.15□□□□□ -0.3
SND1-201ENST00000354725 ZNF771Q7L3S4 317 aaPredicted RBP13.15□□□□□ -0.3
SND1-201ENST00000354725 AFF2P51816 1311 aa13.15□□□□□ -0.3
SND1-201ENST00000354725 VAMP4O75379 141 aa13.15□□□□□ -0.3
SND1-201ENST00000354725 NOL8Q76FK4 1167 aaKnown RBP13.15□□□□□ -0.3
SND1-201ENST00000354725 CHD1LQ86WJ1 897 aa13.15□□□□□ -0.3
SND1-201ENST00000354725 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.3
SND1-201ENST00000354725 TRIM6-TRIM34B2RNG4 842 aa13.14□□□□□ -0.31
SND1-201ENST00000354725 IPO8O15397 1037 aaKnown RBP13.14□□□□□ -0.31
SND1-201ENST00000354725 ONECUT3O60422 494 aaPredicted RBP13.14□□□□□ -0.31
SND1-201ENST00000354725 SIRT2Q8IXJ6 389 aa13.14□□□□□ -0.31
SND1-201ENST00000354725 TRIM34Q9BYJ4 488 aa13.14□□□□□ -0.31
SND1-201ENST00000354725 SBF2Q86WG5 1849 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms