RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 ZSWIM4Q9H7M6 989 aa9.26□□□□□ -0.93
SCN8A-201ENST00000354534 MGEA5O60502 916 aa9.26□□□□□ -0.93
SCN8A-201ENST00000354534 LRRC43Q8N309 656 aa9.26□□□□□ -0.93
SCN8A-201ENST00000354534 CPLX3Q8WVH0 158 aa9.26□□□□□ -0.93
SCN8A-201ENST00000354534 SELENOSQ9BQE4 189 aa9.26□□□□□ -0.93
SCN8A-201ENST00000354534 VCX3BQ9H321 246 aa9.26□□□□□ -0.93
SCN8A-201ENST00000354534 KIAA0753Q2KHM9 967 aa9.26□□□□□ -0.93
SCN8A-201ENST00000354534 A0A1B0GUA9 196 aa9.25□□□□□ -0.93
SCN8A-201ENST00000354534 CEP128Q6ZU80 1094 aa9.25□□□□□ -0.93
SCN8A-201ENST00000354534 NUF2Q9BZD4 464 aa9.25□□□□□ -0.93
SCN8A-201ENST00000354534 MCM6Q14566 821 aa9.25□□□□□ -0.93
SCN8A-201ENST00000354534 PPP4R3AQ6IN85 833 aa9.25□□□□□ -0.93
SCN8A-201ENST00000354534 CEP131Q9UPN4 1083 aa9.25□□□□□ -0.93
SCN8A-201ENST00000354534 MIA2Q96PC5 1412 aa9.25□□□□□ -0.93
SCN8A-201ENST00000354534 FGFR1OPO95684 399 aaKnown RBP9.25□□□□□ -0.93
SCN8A-201ENST00000354534 ACTN2P35609 894 aa9.25□□□□□ -0.93
SCN8A-201ENST00000354534 CEP85LQ5SZL2 805 aa9.25□□□□□ -0.93
SCN8A-201ENST00000354534 DDX12PQ92771 950 aa9.25□□□□□ -0.93
SCN8A-201ENST00000354534 SEC62Q99442 399 aaKnown RBP9.25□□□□□ -0.93
SCN8A-201ENST00000354534 CAPN2P17655 700 aa9.25□□□□□ -0.93
SCN8A-201ENST00000354534 RIPK4P57078 832 aa9.25□□□□□ -0.93
SCN8A-201ENST00000354534 K7ELQ4 463 aaPredicted RBP9.25□□□□□ -0.93
SCN8A-201ENST00000354534 PDIA4P13667 645 aaKnown RBP9.25□□□□□ -0.93
SCN8A-201ENST00000354534 KRT222Q8N1A0 295 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 GSDMBQ8TAX9 411 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 CCDC110Q8TBZ0 833 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 PUF60Q9UHX1 559 aaKnown RBP9.24□□□□□ -0.93
SCN8A-201ENST00000354534 MAP3K7CLP57077 242 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 TSPYL4Q9UJ04 414 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 EFCAB2Q5VUJ9 269 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 ZEB2O60315 1214 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 DIAPH1O60610 1272 aaKnown RBP9.24□□□□□ -0.93
SCN8A-201ENST00000354534 RUFY3Q7L099 469 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 PFDN4Q9NQP4 134 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 BUB1BO60566 1050 aaPredicted RBP9.24□□□□□ -0.93
SCN8A-201ENST00000354534 CLNS1AP54105 237 aaKnown RBP9.24□□□□□ -0.93
SCN8A-201ENST00000354534 LACTBP83111 547 aaPredicted RBP9.24□□□□□ -0.93
SCN8A-201ENST00000354534 SNW1Q13573 536 aaKnown RBP9.24□□□□□ -0.93
SCN8A-201ENST00000354534 LRRC45Q96CN5 670 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.24□□□□□ -0.93
SCN8A-201ENST00000354534 CFAP157Q5JU67 520 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 NAA16Q6N069 864 aaPredicted RBP9.24□□□□□ -0.93
SCN8A-201ENST00000354534 CPLX4Q7Z7G2 160 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 CXorf38Q8TB03 319 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 PSMD6Q15008 389 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 MIER3Q7Z3K6 550 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 CACNA2D3Q8IZS8 1091 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 ARFGAP3Q9NP61 516 aa9.24□□□□□ -0.93
SCN8A-201ENST00000354534 CDKL5O76039 1030 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 LMNTD2Q8IXW0 634 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 TRIM7Q9C029 511 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 HMOX1P09601 288 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 GBP1P32455 592 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 MAP7Q14244 749 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 PANK1Q8TE04 598 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 CIB2O75838 187 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 TACC3Q9Y6A5 838 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 EBAG9O00559 213 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 SNX16P57768 344 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 GNAI1P63096 354 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 ZBTB17Q13105 803 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 NUTM2GQ5VZR2 741 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 PANK3Q9H999 370 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 CUX1P39880 1505 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 YEATS4O95619 227 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 PSME1Q06323 249 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 CNNM1Q9NRU3 951 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 L3MBTL2Q969R5 705 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 XAB2Q9HCS7 855 aaKnown RBP9.23□□□□□ -0.93
SCN8A-201ENST00000354534 APAF1O14727 1248 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 ATICP31939 592 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 SPINK5Q9NQ38 1064 aaPredicted RBP9.23□□□□□ -0.93
SCN8A-201ENST00000354534 ANO10Q9NW15 660 aa9.23□□□□□ -0.93
SCN8A-201ENST00000354534 RNF216Q9NWF9 866 aaPredicted RBP9.23□□□□□ -0.93
SCN8A-201ENST00000354534 VPS52Q8N1B4 723 aa9.22□□□□□ -0.93
SCN8A-201ENST00000354534 STMN4Q9H169 189 aaPredicted RBP9.22□□□□□ -0.93
SCN8A-201ENST00000354534 SMARCA2P51531 1590 aa9.22□□□□□ -0.93
SCN8A-201ENST00000354534 TNIP1Q15025 636 aa9.22□□□□□ -0.93
SCN8A-201ENST00000354534 SMIM23A6NLE4 172 aa9.22□□□□□ -0.93
SCN8A-201ENST00000354534 SURF6O75683 361 aaKnown RBP9.22□□□□□ -0.93
SCN8A-201ENST00000354534 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.22□□□□□ -0.93
SCN8A-201ENST00000354534 PRKRIP1Q9H875 184 aaPredicted RBP9.22□□□□□ -0.93
SCN8A-201ENST00000354534 CCDC129Q6ZRS4 1044 aa9.22□□□□□ -0.93
SCN8A-201ENST00000354534 VGLL3A8MV65 326 aa9.22□□□□□ -0.93
SCN8A-201ENST00000354534 CA8P35219 290 aa9.22□□□□□ -0.93
SCN8A-201ENST00000354534 VPS18Q9P253 973 aa9.22□□□□□ -0.93
SCN8A-201ENST00000354534 TXNDC9O14530 226 aa9.21□□□□□ -0.93
SCN8A-201ENST00000354534 MYO1BO43795 1136 aa9.21□□□□□ -0.93
SCN8A-201ENST00000354534 MVPQ14764 893 aaKnown RBP9.21□□□□□ -0.93
SCN8A-201ENST00000354534 TTC14Q96N46 770 aa9.21□□□□□ -0.93
SCN8A-201ENST00000354534 OPA1O60313 960 aa9.21□□□□□ -0.93
SCN8A-201ENST00000354534 GSTA5Q7RTV2 222 aa9.21□□□□□ -0.93
SCN8A-201ENST00000354534 CCDC12Q8WUD4 166 aaPredicted RBP9.21□□□□□ -0.93
SCN8A-201ENST00000354534 NACAP1Q9BZK3 213 aa9.21□□□□□ -0.93
SCN8A-201ENST00000354534 VIMP08670 466 aaKnown RBP9.21□□□□□ -0.93
SCN8A-201ENST00000354534 INPP1P49441 399 aa9.21□□□□□ -0.93
SCN8A-201ENST00000354534 SF3B2Q13435 895 aaKnown RBP9.21□□□□□ -0.93
SCN8A-201ENST00000354534 NEDD9Q14511 834 aa9.21□□□□□ -0.93
SCN8A-201ENST00000354534 GEN1Q17RS7 908 aa9.21□□□□□ -0.93
SCN8A-201ENST00000354534 ZSCAN29Q8IWY8 852 aaPredicted RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms