RNA–Protein interactions for RNA: ENST00000350887.5

SNRNP35-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRNP35, Length 942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-201ENST00000350887 HYPKQ9NX55 129 aa14.67□□□□□ -0.06
SNRNP35-201ENST00000350887 KDM2BQ8NHM5 1336 aa14.66□□□□□ -0.06
SNRNP35-201ENST00000350887 BCL9O00512 1426 aa14.66□□□□□ -0.06
SNRNP35-201ENST00000350887 PRAMEF22A3QJZ6 481 aa14.66□□□□□ -0.06
SNRNP35-201ENST00000350887 SLC4A10Q6U841 1118 aa14.66□□□□□ -0.06
SNRNP35-201ENST00000350887 RWDD1Q9H446 243 aaPredicted RBP14.66□□□□□ -0.06
SNRNP35-201ENST00000350887 DDX21Q9NR30 783 aaKnown RBP eCLIP14.66□□□□□ -0.06
SNRNP35-201ENST00000350887 AFDNP55196 1824 aaKnown RBP14.66□□□□□ -0.06
SNRNP35-201ENST00000350887 ATRNO75882 1429 aa14.66□□□□□ -0.06
SNRNP35-201ENST00000350887 ARFGEF2Q9Y6D5 1785 aa14.65□□□□□ -0.06
SNRNP35-201ENST00000350887 SYTL4Q96C24 671 aaPredicted RBP14.65□□□□□ -0.06
SNRNP35-201ENST00000350887 PHAXQ9H814 394 aaKnown RBP14.65□□□□□ -0.06
SNRNP35-201ENST00000350887 ZBTB40Q9NUA8 1239 aa14.65□□□□□ -0.06
SNRNP35-201ENST00000350887 ERBB4Q15303 1308 aa14.65□□□□□ -0.06
SNRNP35-201ENST00000350887 F6X3S4 739 aa14.64□□□□□ -0.07
SNRNP35-201ENST00000350887 ZBTB7BO15156 539 aaPredicted RBP14.64□□□□□ -0.07
SNRNP35-201ENST00000350887 DDX58O95786 925 aaKnown RBP14.64□□□□□ -0.07
SNRNP35-201ENST00000350887 PIGBQ92521 554 aa14.64□□□□□ -0.07
SNRNP35-201ENST00000350887 TRPC5Q9UL62 973 aaPredicted RBP14.64□□□□□ -0.07
SNRNP35-201ENST00000350887 PCDHB15Q9Y5E8 787 aa14.64□□□□□ -0.07
SNRNP35-201ENST00000350887 TJP1Q07157 1748 aa14.63□□□□□ -0.07
SNRNP35-201ENST00000350887 NHSQ6T4R5 1651 aa14.63□□□□□ -0.07
SNRNP35-201ENST00000350887 PTCD1O75127 700 aaKnown RBP14.63□□□□□ -0.07
SNRNP35-201ENST00000350887 ANXA1P04083 346 aa14.63□□□□□ -0.07
SNRNP35-201ENST00000350887 MARCH10Q8NA82 808 aaPredicted RBP14.63□□□□□ -0.07
SNRNP35-201ENST00000350887 CICQ96RK0 1608 aaPredicted RBP14.63□□□□□ -0.07
SNRNP35-201ENST00000350887 SBF2Q86WG5 1849 aa14.62□□□□□ -0.07
SNRNP35-201ENST00000350887 NUP188Q5SRE5 1749 aa14.62□□□□□ -0.07
SNRNP35-201ENST00000350887 DNAAF4Q8WXU2 420 aa14.62□□□□□ -0.07
SNRNP35-201ENST00000350887 GJD4Q96KN9 370 aaPredicted RBP14.62□□□□□ -0.07
SNRNP35-201ENST00000350887 TEX13AQ9BXU3 409 aaPredicted RBP14.62□□□□□ -0.07
SNRNP35-201ENST00000350887 ATG3Q9NT62 314 aa14.62□□□□□ -0.07
SNRNP35-201ENST00000350887 USP16Q9Y5T5 823 aa14.62□□□□□ -0.07
SNRNP35-201ENST00000350887 ATP10DQ9P241 1426 aa14.61□□□□□ -0.07
SNRNP35-201ENST00000350887 MYL6BP14649 208 aa14.61□□□□□ -0.07
SNRNP35-201ENST00000350887 PRIM1P49642 420 aaKnown RBP14.61□□□□□ -0.07
SNRNP35-201ENST00000350887 PROSER3Q2NL68 480 aa14.61□□□□□ -0.07
SNRNP35-201ENST00000350887 VSIG10Q8N0Z9 540 aa14.61□□□□□ -0.07
SNRNP35-201ENST00000350887 ASAP1Q9ULH1 1129 aa14.61□□□□□ -0.07
SNRNP35-201ENST00000350887 BTAF1O14981 1849 aa14.61□□□□□ -0.07
SNRNP35-201ENST00000350887 ADCY9O60503 1353 aa14.6□□□□□ -0.07
SNRNP35-201ENST00000350887 IGHDP01880 384 aa14.6□□□□□ -0.07
SNRNP35-201ENST00000350887 HDAC1Q13547 482 aaPredicted RBP14.6□□□□□ -0.07
SNRNP35-201ENST00000350887 PDIA6Q15084 440 aa14.6□□□□□ -0.07
SNRNP35-201ENST00000350887 KSR2Q6VAB6 950 aa14.6□□□□□ -0.07
SNRNP35-201ENST00000350887 ACSBG1Q96GR2 724 aa14.6□□□□□ -0.07
SNRNP35-201ENST00000350887 RBM42Q9BTD8 480 aaKnown RBP14.6□□□□□ -0.07
SNRNP35-201ENST00000350887 SRCIN1Q9C0H9 1055 aa14.6□□□□□ -0.07
SNRNP35-201ENST00000350887 BRWD3Q6RI45 1802 aa14.59□□□□□ -0.07
SNRNP35-201ENST00000350887 ZNF831Q5JPB2 1677 aa14.59□□□□□ -0.07
SNRNP35-201ENST00000350887 PI4KAP2A4QPH2 592 aa14.59□□□□□ -0.07
SNRNP35-201ENST00000350887 GNAI3P08754 354 aa14.59□□□□□ -0.07
SNRNP35-201ENST00000350887 AIMP1Q12904 312 aaKnown RBP14.59□□□□□ -0.07
SNRNP35-201ENST00000350887 PI4KAP1Q8N8J0 262 aa14.59□□□□□ -0.07
SNRNP35-201ENST00000350887 C1orf115Q9H7X2 142 aa14.59□□□□□ -0.07
SNRNP35-201ENST00000350887 RIC3Q7Z5B4 369 aa14.58□□□□□ -0.08
SNRNP35-201ENST00000350887 XAGE3Q8WTP9 111 aa14.58□□□□□ -0.08
SNRNP35-201ENST00000350887 MEIS3Q99687 375 aa14.58□□□□□ -0.08
SNRNP35-201ENST00000350887 MAP3K2Q9Y2U5 619 aa14.58□□□□□ -0.08
SNRNP35-201ENST00000350887 ALDH1L1O75891 902 aa14.57□□□□□ -0.08
SNRNP35-201ENST00000350887 STARD3NLO95772 234 aa14.57□□□□□ -0.08
SNRNP35-201ENST00000350887 NEXNQ0ZGT2 675 aa14.57□□□□□ -0.08
SNRNP35-201ENST00000350887 SMARCC1Q92922 1105 aaPredicted RBP14.57□□□□□ -0.08
SNRNP35-201ENST00000350887 COL5A3P25940 1745 aaPredicted RBP14.57□□□□□ -0.08
SNRNP35-201ENST00000350887 RREB1Q92766 1687 aa14.56□□□□□ -0.08
SNRNP35-201ENST00000350887 ANKRD36CQ5JPF3 1778 aa14.56□□□□□ -0.08
SNRNP35-201ENST00000350887 GNAI2P04899 355 aa14.56□□□□□ -0.08
SNRNP35-201ENST00000350887 BEND3Q5T5X7 828 aa14.56□□□□□ -0.08
SNRNP35-201ENST00000350887 COPS6Q7L5N1 327 aa14.56□□□□□ -0.08
SNRNP35-201ENST00000350887 DNAJC10Q8IXB1 793 aa14.56□□□□□ -0.08
SNRNP35-201ENST00000350887 QTRT2Q9H974 415 aaKnown RBP14.56□□□□□ -0.08
SNRNP35-201ENST00000350887 UBTFL1P0CB47 393 aaPredicted RBP14.55□□□□□ -0.08
SNRNP35-201ENST00000350887 PIP4K2AP48426 406 aaPredicted RBP14.55□□□□□ -0.08
SNRNP35-201ENST00000350887 RPAP2Q8IXW5 612 aaPredicted RBP14.55□□□□□ -0.08
SNRNP35-201ENST00000350887 PALLDQ8WX93 1383 aa14.55□□□□□ -0.08
SNRNP35-201ENST00000350887 HMMRO75330 724 aa14.54□□□□□ -0.08
SNRNP35-201ENST00000350887 ZNF772Q68DY9 489 aaPredicted RBP14.54□□□□□ -0.08
SNRNP35-201ENST00000350887 ANKRD13DQ6ZTN6 518 aa14.54□□□□□ -0.08
SNRNP35-201ENST00000350887 LRP10Q7Z4F1 713 aa14.54□□□□□ -0.08
SNRNP35-201ENST00000350887 ANKRD44Q8N8A2 993 aa14.54□□□□□ -0.08
SNRNP35-201ENST00000350887 LINS1Q8NG48 757 aa14.54□□□□□ -0.08
SNRNP35-201ENST00000350887 HDAC5Q9UQL6 1122 aa14.54□□□□□ -0.08
SNRNP35-201ENST00000350887 LY75O60449 1722 aa14.53□□□□□ -0.08
SNRNP35-201ENST00000350887 NBPF26B4DH59 902 aa14.53□□□□□ -0.08
SNRNP35-201ENST00000350887 ONECUT3O60422 494 aaPredicted RBP14.53□□□□□ -0.08
SNRNP35-201ENST00000350887 A1BGP04217 495 aa14.53□□□□□ -0.08
SNRNP35-201ENST00000350887 NBPF14Q5TI25 921 aa14.53□□□□□ -0.08
SNRNP35-201ENST00000350887 CEP85Q6P2H3 762 aa14.53□□□□□ -0.08
SNRNP35-201ENST00000350887 NBPF10Q6P3W6 841 aaKnown RBP14.53□□□□□ -0.08
SNRNP35-201ENST00000350887 SEPT12Q8IYM1 358 aa14.53□□□□□ -0.08
SNRNP35-201ENST00000350887 NBPF15Q8N660 670 aa14.53□□□□□ -0.08
SNRNP35-201ENST00000350887 PLBD2Q8NHP8 589 aa14.53□□□□□ -0.08
SNRNP35-201ENST00000350887 GCC1Q96CN9 775 aa14.53□□□□□ -0.08
SNRNP35-201ENST00000350887 METTL22Q9BUU2 404 aaPredicted RBP14.53□□□□□ -0.08
SNRNP35-201ENST00000350887 IBTKQ9P2D0 1353 aaPredicted RBP14.52□□□□□ -0.08
SNRNP35-201ENST00000350887 SMC5Q8IY18 1101 aa14.52□□□□□ -0.09
SNRNP35-201ENST00000350887 MYD88Q99836 296 aa14.52□□□□□ -0.09
SNRNP35-201ENST00000350887 C9orf78Q9NZ63 289 aaPredicted RBP14.52□□□□□ -0.09
SNRNP35-201ENST00000350887 PDZRN3Q9UPQ7 1066 aa14.52□□□□□ -0.09
SNRNP35-201ENST00000350887 NUP98P52948 1817 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms