RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PI4K2BQ8TCG2 481 aa21.97■■□□□ 1.11
PTP4A3-202ENST00000349124 CPA1P15085 419 aa21.96■■□□□ 1.11
PTP4A3-202ENST00000349124 MCM2P49736 904 aa21.96■■□□□ 1.11
PTP4A3-202ENST00000349124 ANAPC15P60006 121 aa21.96■■□□□ 1.11
PTP4A3-202ENST00000349124 RASEFQ8IZ41 740 aa21.96■■□□□ 1.11
PTP4A3-202ENST00000349124 LRSAM1Q6UWE0 723 aa21.95■■□□□ 1.1
PTP4A3-202ENST00000349124 EIF4A1P60842 406 aaKnown RBP21.95■■□□□ 1.1
PTP4A3-202ENST00000349124 SPG7Q9UQ90 795 aa21.95■■□□□ 1.1
PTP4A3-202ENST00000349124 HSPA4P34932 840 aa21.94■■□□□ 1.1
PTP4A3-202ENST00000349124 POLA2Q14181 598 aa21.94■■□□□ 1.1
PTP4A3-202ENST00000349124 LRRC59Q96AG4 307 aaKnown RBP21.94■■□□□ 1.1
PTP4A3-202ENST00000349124 NWD1Q149M9 1564 aa21.94■■□□□ 1.1
PTP4A3-202ENST00000349124 CWC27Q6UX04 472 aaKnown RBP21.94■■□□□ 1.1
PTP4A3-202ENST00000349124 PIK3C2AO00443 1686 aa21.94■■□□□ 1.1
PTP4A3-202ENST00000349124 DIP2AQ14689 1571 aa21.94■■□□□ 1.1
PTP4A3-202ENST00000349124 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.93■■□□□ 1.1
PTP4A3-202ENST00000349124 BEND3Q5T5X7 828 aa21.93■■□□□ 1.1
PTP4A3-202ENST00000349124 MPRIPQ6WCQ1 1025 aa21.93■■□□□ 1.1
PTP4A3-202ENST00000349124 INTS4Q96HW7 963 aaKnown RBP21.93■■□□□ 1.1
PTP4A3-202ENST00000349124 PDLIM2Q96JY6 352 aa21.92■■□□□ 1.1
PTP4A3-202ENST00000349124 SGSM2O43147 1006 aa21.92■■□□□ 1.1
PTP4A3-202ENST00000349124 MSNP26038 577 aaKnown RBP21.92■■□□□ 1.1
PTP4A3-202ENST00000349124 SNX14Q9Y5W7 946 aa21.92■■□□□ 1.1
PTP4A3-202ENST00000349124 USP48Q86UV5 1035 aa21.91■■□□□ 1.1
PTP4A3-202ENST00000349124 DDX54Q8TDD1 881 aaKnown RBP21.91■■□□□ 1.1
PTP4A3-202ENST00000349124 DNAAF4Q8WXU2 420 aa21.91■■□□□ 1.1
PTP4A3-202ENST00000349124 KIAA1211Q6ZU35 1233 aa21.91■■□□□ 1.1
PTP4A3-202ENST00000349124 FMN2Q9NZ56 1722 aa21.91■■□□□ 1.1
PTP4A3-202ENST00000349124 RAB11FIP3O75154 756 aa21.9■■□□□ 1.1
PTP4A3-202ENST00000349124 THEMISQ8N1K5 641 aaPredicted RBP21.9■■□□□ 1.1
PTP4A3-202ENST00000349124 XRN1Q8IZH2 1706 aaKnown RBP21.9■■□□□ 1.1
PTP4A3-202ENST00000349124 PRAMEF22A3QJZ6 481 aa21.9■■□□□ 1.1
PTP4A3-202ENST00000349124 KIF1BPQ96EK5 621 aa21.9■■□□□ 1.1
PTP4A3-202ENST00000349124 LSG1Q9H089 658 aaKnown RBP21.9■■□□□ 1.1
PTP4A3-202ENST00000349124 PA2G4Q9UQ80 394 aaKnown RBP21.9■■□□□ 1.1
PTP4A3-202ENST00000349124 MPNDQ8N594 471 aa21.89■■□□□ 1.1
PTP4A3-202ENST00000349124 XPCQ01831 940 aaPredicted RBP21.89■■□□□ 1.09
PTP4A3-202ENST00000349124 PROSER3Q2NL68 480 aa21.89■■□□□ 1.09
PTP4A3-202ENST00000349124 AK2P54819 239 aa21.88■■□□□ 1.09
PTP4A3-202ENST00000349124 OS9Q13438 667 aaPredicted RBP21.88■■□□□ 1.09
PTP4A3-202ENST00000349124 IP6K1Q92551 441 aa21.88■■□□□ 1.09
PTP4A3-202ENST00000349124 BABAM1Q9NWV8 329 aa21.88■■□□□ 1.09
PTP4A3-202ENST00000349124 MBD3O95983 291 aa21.87■■□□□ 1.09
PTP4A3-202ENST00000349124 RUFY3Q7L099 469 aa21.87■■□□□ 1.09
PTP4A3-202ENST00000349124 PHF8Q9UPP1 1060 aa21.87■■□□□ 1.09
PTP4A3-202ENST00000349124 BTBD11A6QL63 1104 aa21.87■■□□□ 1.09
PTP4A3-202ENST00000349124 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.87■■□□□ 1.09
PTP4A3-202ENST00000349124 SETD1BQ9UPS6 1966 aaKnown RBP21.87■■□□□ 1.09
PTP4A3-202ENST00000349124 AOX1Q06278 1338 aa21.87■■□□□ 1.09
PTP4A3-202ENST00000349124 RAD50Q92878 1312 aa21.87■■□□□ 1.09
PTP4A3-202ENST00000349124 CEMIPQ8WUJ3 1361 aa21.87■■□□□ 1.09
PTP4A3-202ENST00000349124 IL17RAQ96F46 866 aa21.86■■□□□ 1.09
PTP4A3-202ENST00000349124 LARGE1O95461 756 aa21.86■■□□□ 1.09
PTP4A3-202ENST00000349124 PTH1RQ03431 593 aa21.86■■□□□ 1.09
PTP4A3-202ENST00000349124 TTC14Q96N46 770 aa21.86■■□□□ 1.09
PTP4A3-202ENST00000349124 NOL7Q9UMY1 257 aaKnown RBP21.86■■□□□ 1.09
PTP4A3-202ENST00000349124 TEFQ10587 303 aa21.86■■□□□ 1.09
PTP4A3-202ENST00000349124 CWF19L2Q2TBE0 894 aaKnown RBP21.86■■□□□ 1.09
PTP4A3-202ENST00000349124 ZNF530Q6P9A1 599 aaPredicted RBP21.86■■□□□ 1.09
PTP4A3-202ENST00000349124 CNPY2Q9Y2B0 182 aa21.86■■□□□ 1.09
PTP4A3-202ENST00000349124 FAM208AQ9UK61 1670 aaKnown RBP21.85■■□□□ 1.09
PTP4A3-202ENST00000349124 OFD1O75665 1012 aa21.85■■□□□ 1.09
PTP4A3-202ENST00000349124 CNTROBQ8N137 903 aa21.85■■□□□ 1.09
PTP4A3-202ENST00000349124 COL9A3Q14050 684 aaPredicted RBP21.85■■□□□ 1.09
PTP4A3-202ENST00000349124 ADCK5Q3MIX3 580 aa21.85■■□□□ 1.09
PTP4A3-202ENST00000349124 UBE2Q2Q8WVN8 375 aa21.85■■□□□ 1.09
PTP4A3-202ENST00000349124 ADCY9O60503 1353 aa21.84■■□□□ 1.09
PTP4A3-202ENST00000349124 HSP90AA2PQ14568 343 aaPredicted RBP21.84■■□□□ 1.09
PTP4A3-202ENST00000349124 RPAP1Q9BWH6 1393 aaPredicted RBP21.84■■□□□ 1.09
PTP4A3-202ENST00000349124 LRRC37A3O60309 1634 aa21.84■■□□□ 1.09
PTP4A3-202ENST00000349124 MAP3K2Q9Y2U5 619 aa21.84■■□□□ 1.09
PTP4A3-202ENST00000349124 KIF13AQ9H1H9 1805 aa21.83■■□□□ 1.09
PTP4A3-202ENST00000349124 WDR33Q9C0J8 1336 aaKnown RBP21.83■■□□□ 1.09
PTP4A3-202ENST00000349124 CASTP20810 708 aaKnown RBP21.83■■□□□ 1.09
PTP4A3-202ENST00000349124 TUBGCP6Q96RT7 1819 aa21.83■■□□□ 1.09
PTP4A3-202ENST00000349124 ARHGAP23Q9P227 1491 aa21.83■■□□□ 1.08
PTP4A3-202ENST00000349124 ESCO1Q5FWF5 840 aa21.83■■□□□ 1.08
PTP4A3-202ENST00000349124 TSPY26PQ9H489 355 aa21.83■■□□□ 1.08
PTP4A3-202ENST00000349124 SYT1P21579 422 aa21.82■■□□□ 1.08
PTP4A3-202ENST00000349124 PSME1Q06323 249 aa21.82■■□□□ 1.08
PTP4A3-202ENST00000349124 C9orf78Q9NZ63 289 aaPredicted RBP21.82■■□□□ 1.08
PTP4A3-202ENST00000349124 R3HCC1Q9Y3T6 440 aaKnown RBP21.82■■□□□ 1.08
PTP4A3-202ENST00000349124 PRPF40BQ6NWY9 871 aaKnown RBP21.81■■□□□ 1.08
PTP4A3-202ENST00000349124 SLIT1O75093 1534 aa21.8■■□□□ 1.08
PTP4A3-202ENST00000349124 LIMCH1Q9UPQ0 1083 aa21.8■■□□□ 1.08
PTP4A3-202ENST00000349124 PXDNLA1KZ92 1463 aa21.8■■□□□ 1.08
PTP4A3-202ENST00000349124 AIMP1Q12904 312 aaKnown RBP21.8■■□□□ 1.08
PTP4A3-202ENST00000349124 HS1BP3Q53T59 392 aa21.8■■□□□ 1.08
PTP4A3-202ENST00000349124 CCDC83Q8IWF9 413 aa21.8■■□□□ 1.08
PTP4A3-202ENST00000349124 DIAPH3Q9NSV4 1193 aa21.8■■□□□ 1.08
PTP4A3-202ENST00000349124 LMOD2Q6P5Q4 547 aa21.79■■□□□ 1.08
PTP4A3-202ENST00000349124 CLASRPQ8N2M8 674 aaKnown RBP21.79■■□□□ 1.08
PTP4A3-202ENST00000349124 ZKSCAN5Q9Y2L8 839 aa21.79■■□□□ 1.08
PTP4A3-202ENST00000349124 ZSCAN22P10073 491 aaPredicted RBP21.79■■□□□ 1.08
PTP4A3-202ENST00000349124 STX6O43752 255 aa21.79■■□□□ 1.08
PTP4A3-202ENST00000349124 GLRX3O76003 335 aaKnown RBP21.79■■□□□ 1.08
PTP4A3-202ENST00000349124 JAKMIP1Q96N16 626 aaKnown RBP21.79■■□□□ 1.08
PTP4A3-202ENST00000349124 FIBPO43427 364 aa21.78■■□□□ 1.08
PTP4A3-202ENST00000349124 AKAP4Q5JQC9 854 aa21.78■■□□□ 1.08
PTP4A3-202ENST00000349124 HYPKQ9NX55 129 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms