RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 F6X3S4 739 aa18.14■□□□□ 0.49
PTBP1-201ENST00000349038 TIGD1Q96MW7 591 aa18.14■□□□□ 0.49
PTBP1-201ENST00000349038 MEIS3Q99687 375 aa18.14■□□□□ 0.49
PTBP1-201ENST00000349038 MYO5BQ9ULV0 1848 aa18.13■□□□□ 0.49
PTBP1-201ENST00000349038 FOSBP53539 338 aa18.13■□□□□ 0.49
PTBP1-201ENST00000349038 A0A087WWV3 80 aa18.13■□□□□ 0.49
PTBP1-201ENST00000349038 CCDC66A2RUB6 948 aa18.13■□□□□ 0.49
PTBP1-201ENST00000349038 IL1RAPL2Q9NP60 686 aa18.13■□□□□ 0.49
PTBP1-201ENST00000349038 MIS18AQ9NYP9 233 aa18.13■□□□□ 0.49
PTBP1-201ENST00000349038 MX1P20591 662 aa18.12■□□□□ 0.49
PTBP1-201ENST00000349038 IL13P35225 146 aa18.12■□□□□ 0.49
PTBP1-201ENST00000349038 ARID5BQ14865 1188 aa18.12■□□□□ 0.49
PTBP1-201ENST00000349038 FAM184AQ8NB25 1140 aa18.12■□□□□ 0.49
PTBP1-201ENST00000349038 ATP7BP35670 1465 aa18.12■□□□□ 0.49
PTBP1-201ENST00000349038 ATP10DQ9P241 1426 aa18.12■□□□□ 0.49
PTBP1-201ENST00000349038 ELF2Q15723 593 aa18.12■□□□□ 0.49
PTBP1-201ENST00000349038 TFIP11Q9UBB9 837 aaKnown RBP18.12■□□□□ 0.49
PTBP1-201ENST00000349038 CEBPZQ03701 1054 aaKnown RBP18.12■□□□□ 0.49
PTBP1-201ENST00000349038 SKIDA1Q1XH10 827 aa18.11■□□□□ 0.49
PTBP1-201ENST00000349038 CTNNA3Q9UI47 895 aa18.11■□□□□ 0.49
PTBP1-201ENST00000349038 DIP2CQ9Y2E4 1556 aa18.11■□□□□ 0.49
PTBP1-201ENST00000349038 ZNF215Q9UL58 517 aaPredicted RBP18.11■□□□□ 0.49
PTBP1-201ENST00000349038 SMC3Q9UQE7 1217 aa18.11■□□□□ 0.49
PTBP1-201ENST00000349038 WDR33Q9C0J8 1336 aaKnown RBP18.1■□□□□ 0.49
PTBP1-201ENST00000349038 SLFN14P0C7P3 912 aa18.1■□□□□ 0.49
PTBP1-201ENST00000349038 CCDC83Q8IWF9 413 aa18.1■□□□□ 0.49
PTBP1-201ENST00000349038 CDK12Q9NYV4 1490 aaPredicted RBP18.1■□□□□ 0.49
PTBP1-201ENST00000349038 ANKRD44Q8N8A2 993 aa18.1■□□□□ 0.49
PTBP1-201ENST00000349038 ALKQ9UM73 1620 aa18.1■□□□□ 0.49
PTBP1-201ENST00000349038 RIMS2Q9UQ26 1411 aa18.09■□□□□ 0.49
PTBP1-201ENST00000349038 KRT222Q8N1A0 295 aa18.09■□□□□ 0.49
PTBP1-201ENST00000349038 MAP2P11137 1827 aaKnown RBP18.09■□□□□ 0.49
PTBP1-201ENST00000349038 PPFIA3O75145 1194 aa18.09■□□□□ 0.49
PTBP1-201ENST00000349038 LMOD3Q0VAK6 560 aa18.09■□□□□ 0.49
PTBP1-201ENST00000349038 RGS12O14924 1447 aa18.08■□□□□ 0.49
PTBP1-201ENST00000349038 FEZ1Q99689 392 aa18.08■□□□□ 0.49
PTBP1-201ENST00000349038 CPSF1Q10570 1443 aaKnown RBP18.08■□□□□ 0.48
PTBP1-201ENST00000349038 TERF2Q15554 542 aa18.08■□□□□ 0.48
PTBP1-201ENST00000349038 EMILIN1Q9Y6C2 1016 aa18.08■□□□□ 0.48
PTBP1-201ENST00000349038 ADAMTSL3P82987 1691 aa18.08■□□□□ 0.48
PTBP1-201ENST00000349038 NEK11Q8NG66 645 aa18.07■□□□□ 0.48
PTBP1-201ENST00000349038 ANKRD7Q92527 254 aa18.07■□□□□ 0.48
PTBP1-201ENST00000349038 TCEANC2Q96MN5 208 aa18.07■□□□□ 0.48
PTBP1-201ENST00000349038 DLG5Q8TDM6 1919 aa18.07■□□□□ 0.48
PTBP1-201ENST00000349038 PREX1Q8TCU6 1659 aa18.07■□□□□ 0.48
PTBP1-201ENST00000349038 TAF3Q5VWG9 929 aa18.07■□□□□ 0.48
PTBP1-201ENST00000349038 NECAB1Q8N987 351 aa18.07■□□□□ 0.48
PTBP1-201ENST00000349038 USP27XA6NNY8 438 aa18.06■□□□□ 0.48
PTBP1-201ENST00000349038 CCDC192P0DO97 292 aa18.06■□□□□ 0.48
PTBP1-201ENST00000349038 SPTLC3Q9NUV7 552 aa18.06■□□□□ 0.48
PTBP1-201ENST00000349038 SYT1P21579 422 aa18.06■□□□□ 0.48
PTBP1-201ENST00000349038 KMT5BQ4FZB7 885 aa18.06■□□□□ 0.48
PTBP1-201ENST00000349038 CEP85Q6P2H3 762 aa18.06■□□□□ 0.48
PTBP1-201ENST00000349038 NUTM1Q86Y26 1132 aa18.06■□□□□ 0.48
PTBP1-201ENST00000349038 RPAP2Q8IXW5 612 aaPredicted RBP18.06■□□□□ 0.48
PTBP1-201ENST00000349038 AATKQ6ZMQ8 1374 aa18.06■□□□□ 0.48
PTBP1-201ENST00000349038 UVSSAQ2YD98 709 aa18.05■□□□□ 0.48
PTBP1-201ENST00000349038 ANO6Q4KMQ2 910 aa18.05■□□□□ 0.48
PTBP1-201ENST00000349038 CEP135Q66GS9 1140 aa18.05■□□□□ 0.48
PTBP1-201ENST00000349038 SPG7Q9UQ90 795 aa18.05■□□□□ 0.48
PTBP1-201ENST00000349038 STX6O43752 255 aa18.05■□□□□ 0.48
PTBP1-201ENST00000349038 KIF18AQ8NI77 898 aa18.05■□□□□ 0.48
PTBP1-201ENST00000349038 DLC1Q96QB1 1528 aa18.05■□□□□ 0.48
PTBP1-201ENST00000349038 UNC5CLQ8IV45 518 aa18.05■□□□□ 0.48
PTBP1-201ENST00000349038 FAM177A1Q8N128 213 aaPredicted RBP18.05■□□□□ 0.48
PTBP1-201ENST00000349038 CLIP2Q9UDT6 1046 aa18.05■□□□□ 0.48
PTBP1-201ENST00000349038 PDE1AP54750 535 aa18.04■□□□□ 0.48
PTBP1-201ENST00000349038 ERCC4Q92889 916 aaPredicted RBP18.04■□□□□ 0.48
PTBP1-201ENST00000349038 DDX41Q9UJV9 622 aaKnown RBP18.04■□□□□ 0.48
PTBP1-201ENST00000349038 AGLP35573 1532 aa18.04■□□□□ 0.48
PTBP1-201ENST00000349038 UBE2HP62256 183 aa18.04■□□□□ 0.48
PTBP1-201ENST00000349038 DNAJC25Q9H1X3 360 aa18.04■□□□□ 0.48
PTBP1-201ENST00000349038 EDC4Q6P2E9 1401 aaKnown RBP18.04■□□□□ 0.48
PTBP1-201ENST00000349038 C10orf67Q8IYJ2 551 aa18.03■□□□□ 0.48
PTBP1-201ENST00000349038 BICD2Q8TD16 824 aa18.03■□□□□ 0.48
PTBP1-201ENST00000349038 STK3Q13188 491 aa18.03■□□□□ 0.48
PTBP1-201ENST00000349038 FBXO38Q6PIJ6 1188 aa18.03■□□□□ 0.48
PTBP1-201ENST00000349038 NOL10Q9BSC4 688 aaKnown RBP18.03■□□□□ 0.48
PTBP1-201ENST00000349038 TOMM22Q9NS69 142 aa18.03■□□□□ 0.48
PTBP1-201ENST00000349038 RTL1A6NKG5 1358 aa18.03■□□□□ 0.48
PTBP1-201ENST00000349038 HNRNPH2P55795 449 aaKnown RBP18.03■□□□□ 0.48
PTBP1-201ENST00000349038 ESYT1Q9BSJ8 1104 aa18.03■□□□□ 0.48
PTBP1-201ENST00000349038 ZSCAN22P10073 491 aaPredicted RBP18.02■□□□□ 0.48
PTBP1-201ENST00000349038 FMNL2Q96PY5 1086 aa18.02■□□□□ 0.48
PTBP1-201ENST00000349038 IL25Q9H293 177 aa18.02■□□□□ 0.48
PTBP1-201ENST00000349038 TNMDQ9H2S6 317 aa18.02■□□□□ 0.48
PTBP1-201ENST00000349038 CAPN2P17655 700 aa18.02■□□□□ 0.48
PTBP1-201ENST00000349038 LIG1P18858 919 aa18.02■□□□□ 0.48
PTBP1-201ENST00000349038 CACTINQ8WUQ7 758 aaKnown RBP18.02■□□□□ 0.48
PTBP1-201ENST00000349038 KDM4FA0A1W2PPD8 638 aa18.01■□□□□ 0.47
PTBP1-201ENST00000349038 PTPN14Q15678 1187 aa18.01■□□□□ 0.47
PTBP1-201ENST00000349038 CWC27Q6UX04 472 aaKnown RBP18.01■□□□□ 0.47
PTBP1-201ENST00000349038 DACT1Q9NYF0 836 aa18.01■□□□□ 0.47
PTBP1-201ENST00000349038 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
PTBP1-201ENST00000349038 ERCC6LQ2NKX8 1250 aa18.01■□□□□ 0.47
PTBP1-201ENST00000349038 USP16Q9Y5T5 823 aa18.01■□□□□ 0.47
PTBP1-201ENST00000349038 MSH6P52701 1360 aa18.01■□□□□ 0.47
PTBP1-201ENST00000349038 SMTNL1A8MU46 457 aa18.01■□□□□ 0.47
PTBP1-201ENST00000349038 NUP62CLQ9H1M0 184 aa18.01■□□□□ 0.47
PTBP1-201ENST00000349038 GABPB1Q06547 395 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms