RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 C22orf23Q9BZE7 217 aa13.72□□□□□ -0.21
TRAF3-201ENST00000347662 PUF60Q9UHX1 559 aaKnown RBP13.72□□□□□ -0.21
TRAF3-201ENST00000347662 CAMSAP2Q08AD1 1489 aa13.72□□□□□ -0.21
TRAF3-201ENST00000347662 C8orf37Q96NL8 207 aa13.72□□□□□ -0.21
TRAF3-201ENST00000347662 UNC13AQ9UPW8 1703 aa13.72□□□□□ -0.21
TRAF3-201ENST00000347662 ADGRF5Q8IZF2 1346 aa13.71□□□□□ -0.21
TRAF3-201ENST00000347662 UQCRHLA0A096LP55 91 aa13.71□□□□□ -0.21
TRAF3-201ENST00000347662 WWC3Q9ULE0 1092 aa13.71□□□□□ -0.21
TRAF3-201ENST00000347662 PCF11O94913 1555 aaKnown RBP13.71□□□□□ -0.21
TRAF3-201ENST00000347662 SRGAP3O43295 1099 aa13.71□□□□□ -0.21
TRAF3-201ENST00000347662 PDCP20941 246 aa13.71□□□□□ -0.21
TRAF3-201ENST00000347662 CADPS2Q86UW7 1296 aa13.71□□□□□ -0.21
TRAF3-201ENST00000347662 LUZP1Q86V48 1076 aa13.71□□□□□ -0.22
TRAF3-201ENST00000347662 GPATCH11Q8N954 259 aa13.71□□□□□ -0.22
TRAF3-201ENST00000347662 TOM1O60784 492 aa13.71□□□□□ -0.22
TRAF3-201ENST00000347662 CUL7Q14999 1698 aa13.7□□□□□ -0.22
TRAF3-201ENST00000347662 AKNAQ7Z591 1439 aa13.7□□□□□ -0.22
TRAF3-201ENST00000347662 SPA17Q15506 151 aa13.7□□□□□ -0.22
TRAF3-201ENST00000347662 CFAP58Q5T655 872 aa13.7□□□□□ -0.22
TRAF3-201ENST00000347662 ZNF652Q9Y2D9 606 aa13.7□□□□□ -0.22
TRAF3-201ENST00000347662 HIP1O00291 1037 aa13.7□□□□□ -0.22
TRAF3-201ENST00000347662 CEP126Q9P2H0 1117 aa13.7□□□□□ -0.22
TRAF3-201ENST00000347662 TTC36A6NLP5 189 aa13.7□□□□□ -0.22
TRAF3-201ENST00000347662 CACNA2D4Q7Z3S7 1137 aa13.7□□□□□ -0.22
TRAF3-201ENST00000347662 SEC63Q9UGP8 760 aaKnown RBP13.7□□□□□ -0.22
TRAF3-201ENST00000347662 IGHMBP2P38935 993 aaKnown RBP13.7□□□□□ -0.22
TRAF3-201ENST00000347662 LRP2BPQ9P2M1 347 aa13.7□□□□□ -0.22
TRAF3-201ENST00000347662 CRACR2BQ8N4Y2 399 aaPredicted RBP13.7□□□□□ -0.22
TRAF3-201ENST00000347662 IPO4Q8TEX9 1081 aaKnown RBP13.7□□□□□ -0.22
TRAF3-201ENST00000347662 UBAC1Q9BSL1 405 aa13.7□□□□□ -0.22
TRAF3-201ENST00000347662 NDC80O14777 642 aa13.69□□□□□ -0.22
TRAF3-201ENST00000347662 RAI14Q9P0K7 980 aa13.69□□□□□ -0.22
TRAF3-201ENST00000347662 ANKIB1Q9P2G1 1089 aa13.69□□□□□ -0.22
TRAF3-201ENST00000347662 WASLO00401 505 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-201ENST00000347662 FERMT1Q9BQL6 677 aa13.69□□□□□ -0.22
TRAF3-201ENST00000347662 GPTP24298 496 aa13.69□□□□□ -0.22
TRAF3-201ENST00000347662 NAP1L3Q99457 506 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-201ENST00000347662 EMILIN1Q9Y6C2 1016 aa13.69□□□□□ -0.22
TRAF3-201ENST00000347662 UQCRHP07919 91 aa13.68□□□□□ -0.22
TRAF3-201ENST00000347662 CCT4P50991 539 aaKnown RBP13.68□□□□□ -0.22
TRAF3-201ENST00000347662 NEK4P51957 841 aa13.68□□□□□ -0.22
TRAF3-201ENST00000347662 CCDC96Q2M329 555 aa13.68□□□□□ -0.22
TRAF3-201ENST00000347662 ARHGAP29Q52LW3 1261 aa13.68□□□□□ -0.22
TRAF3-201ENST00000347662 SPECC1Q5M775 1068 aa13.68□□□□□ -0.22
TRAF3-201ENST00000347662 IL1RAPL2Q9NP60 686 aa13.68□□□□□ -0.22
TRAF3-201ENST00000347662 CCDC192P0DO97 292 aa13.68□□□□□ -0.22
TRAF3-201ENST00000347662 TPD52P55327 224 aaPredicted RBP13.68□□□□□ -0.22
TRAF3-201ENST00000347662 TSG101Q99816 390 aa13.68□□□□□ -0.22
TRAF3-201ENST00000347662 ODF2LQ9ULJ1 636 aa13.68□□□□□ -0.22
TRAF3-201ENST00000347662 FSD2A1L4K1 749 aa13.68□□□□□ -0.22
TRAF3-201ENST00000347662 IDH1O75874 414 aaKnown RBP13.68□□□□□ -0.22
TRAF3-201ENST00000347662 AACSQ86V21 672 aa13.68□□□□□ -0.22
TRAF3-201ENST00000347662 CDC45O75419 566 aa13.68□□□□□ -0.22
TRAF3-201ENST00000347662 C6orf163Q5TEZ5 329 aa13.68□□□□□ -0.22
TRAF3-201ENST00000347662 MXRA7P84157 204 aa13.67□□□□□ -0.22
TRAF3-201ENST00000347662 NOP2P46087 812 aaKnown RBP13.67□□□□□ -0.22
TRAF3-201ENST00000347662 ACSBG1Q96GR2 724 aa13.67□□□□□ -0.22
TRAF3-201ENST00000347662 GTPBP4Q9BZE4 634 aaKnown RBP13.67□□□□□ -0.22
TRAF3-201ENST00000347662 TMX1Q9H3N1 280 aa13.67□□□□□ -0.22
TRAF3-201ENST00000347662 FBLN1P23142 703 aa13.67□□□□□ -0.22
TRAF3-201ENST00000347662 METTL24Q5JXM2 366 aa13.67□□□□□ -0.22
TRAF3-201ENST00000347662 AEBP1Q8IUX7 1158 aa13.67□□□□□ -0.22
TRAF3-201ENST00000347662 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
TRAF3-201ENST00000347662 MSH6P52701 1360 aa13.67□□□□□ -0.22
TRAF3-201ENST00000347662 TMPOP42166 694 aaKnown RBP13.66□□□□□ -0.22
TRAF3-201ENST00000347662 SPTY2D1Q68D10 685 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-201ENST00000347662 PPP1R9BQ96SB3 815 aa13.66□□□□□ -0.22
TRAF3-201ENST00000347662 NFE2L2Q16236 605 aa13.66□□□□□ -0.22
TRAF3-201ENST00000347662 IMMTQ16891 758 aaKnown RBP13.66□□□□□ -0.22
TRAF3-201ENST00000347662 DUSP27Q5VZP5 1158 aa13.66□□□□□ -0.22
TRAF3-201ENST00000347662 FCHSD2O94868 740 aa13.66□□□□□ -0.22
TRAF3-201ENST00000347662 RFX1P22670 979 aa13.66□□□□□ -0.22
TRAF3-201ENST00000347662 TMCO4Q5TGY1 634 aa13.66□□□□□ -0.22
TRAF3-201ENST00000347662 IKBKGQ9Y6K9 419 aa13.66□□□□□ -0.22
TRAF3-201ENST00000347662 CASQ1P31415 396 aa13.66□□□□□ -0.22
TRAF3-201ENST00000347662 VPS36Q86VN1 386 aa13.66□□□□□ -0.22
TRAF3-201ENST00000347662 ZNF526Q8TF50 670 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-201ENST00000347662 SREK1Q8WXA9 508 aaKnown RBP13.66□□□□□ -0.22
TRAF3-201ENST00000347662 SATB1Q01826 763 aa13.65□□□□□ -0.22
TRAF3-201ENST00000347662 PTPN23Q9H3S7 1636 aa13.65□□□□□ -0.22
TRAF3-201ENST00000347662 LRRC45Q96CN5 670 aa13.65□□□□□ -0.22
TRAF3-201ENST00000347662 MYD88Q99836 296 aa13.65□□□□□ -0.22
TRAF3-201ENST00000347662 POLR3DP05423 398 aaPredicted RBP13.65□□□□□ -0.22
TRAF3-201ENST00000347662 CABLES1Q8TDN4 633 aa13.65□□□□□ -0.22
TRAF3-201ENST00000347662 PAIP2Q9BPZ3 127 aaKnown RBP13.65□□□□□ -0.22
TRAF3-201ENST00000347662 TSHZ2Q9NRE2 1034 aa13.65□□□□□ -0.22
TRAF3-201ENST00000347662 ECM2O94769 699 aaPredicted RBP13.65□□□□□ -0.22
TRAF3-201ENST00000347662 TAOK3Q9H2K8 898 aa13.65□□□□□ -0.22
TRAF3-201ENST00000347662 KLHL10Q6JEL2 608 aa13.64□□□□□ -0.23
TRAF3-201ENST00000347662 FKBP15Q5T1M5 1219 aa13.64□□□□□ -0.23
TRAF3-201ENST00000347662 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
TRAF3-201ENST00000347662 CUL5Q93034 780 aa13.64□□□□□ -0.23
TRAF3-201ENST00000347662 MRE11P49959 708 aa13.64□□□□□ -0.23
TRAF3-201ENST00000347662 SRRTQ9BXP5 876 aaKnown RBP13.64□□□□□ -0.23
TRAF3-201ENST00000347662 CYP46A1Q9Y6A2 500 aa13.64□□□□□ -0.23
TRAF3-201ENST00000347662 HLTFQ14527 1009 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAF3-201ENST00000347662 TNRQ92752 1358 aa13.64□□□□□ -0.23
TRAF3-201ENST00000347662 TRMT112Q9UI30 125 aaKnown RBP13.64□□□□□ -0.23
TRAF3-201ENST00000347662 A0A1W2PRG0 241 aa13.63□□□□□ -0.23
TRAF3-201ENST00000347662 ATF7IPQ6VMQ6 1270 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms