RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 HDGFL1Q5TGJ6 251 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 FOXD4L3Q6VB84 417 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-201ENST00000347613 PA2G4Q9UQ80 394 aaKnown RBP7.44□□□□□ -1.22
CLCN3-201ENST00000347613 IGSF3O75054 1194 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 CWF19L2Q2TBE0 894 aaKnown RBP7.44□□□□□ -1.22
CLCN3-201ENST00000347613 BEND3Q5T5X7 828 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 FAM43AQ8N2R8 423 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 KAZALD1Q96I82 304 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 PKNOX2Q96KN3 472 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 LRRCC1Q9C099 1032 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 HSP90AA1P07900 732 aaKnown RBP7.43□□□□□ -1.22
CLCN3-201ENST00000347613 CCDC30Q5VVM6 783 aa7.43□□□□□ -1.22
CLCN3-201ENST00000347613 RASEFQ8IZ41 740 aa7.43□□□□□ -1.22
CLCN3-201ENST00000347613 IP6K1Q92551 441 aa7.43□□□□□ -1.22
CLCN3-201ENST00000347613 CACNA1FO60840 1977 aa7.43□□□□□ -1.22
CLCN3-201ENST00000347613 ERC2O15083 957 aa7.43□□□□□ -1.22
CLCN3-201ENST00000347613 NEK4P51957 841 aa7.43□□□□□ -1.22
CLCN3-201ENST00000347613 CLEC17AQ6ZS10 378 aa7.43□□□□□ -1.22
CLCN3-201ENST00000347613 DDX54Q8TDD1 881 aaKnown RBP7.43□□□□□ -1.22
CLCN3-201ENST00000347613 JARID2Q92833 1246 aaPredicted RBP7.43□□□□□ -1.22
CLCN3-201ENST00000347613 TMX3Q96JJ7 454 aa7.43□□□□□ -1.22
CLCN3-201ENST00000347613 POLA2Q14181 598 aa7.42□□□□□ -1.22
CLCN3-201ENST00000347613 RABEP1Q15276 862 aa7.42□□□□□ -1.22
CLCN3-201ENST00000347613 SSH3Q8TE77 659 aa7.42□□□□□ -1.22
CLCN3-201ENST00000347613 CHMP4BQ9H444 224 aaKnown RBP7.42□□□□□ -1.22
CLCN3-201ENST00000347613 TRIM6-TRIM34B2RNG4 842 aa7.42□□□□□ -1.22
CLCN3-201ENST00000347613 KLHDC4Q8TBB5 520 aa7.42□□□□□ -1.22
CLCN3-201ENST00000347613 STK31Q9BXU1 1019 aa7.42□□□□□ -1.22
CLCN3-201ENST00000347613 CIZ1Q9ULV3 898 aaPredicted RBP7.42□□□□□ -1.22
CLCN3-201ENST00000347613 TAF6LQ9Y6J9 622 aa7.42□□□□□ -1.22
CLCN3-201ENST00000347613 SLC39A6Q13433 755 aa7.42□□□□□ -1.22
CLCN3-201ENST00000347613 GDPD2Q9HCC8 539 aa7.42□□□□□ -1.22
CLCN3-201ENST00000347613 FBXO3Q9UK99 471 aa7.42□□□□□ -1.22
CLCN3-201ENST00000347613 DDX11L8A8MPP1 907 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 PRPF40AO75400 957 aaKnown RBP7.41□□□□□ -1.22
CLCN3-201ENST00000347613 ANKARQ7Z5J8 1434 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 STAP2Q9UGK3 403 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 LMO7Q8WWI1 1683 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 HTATSF1O43719 755 aaKnown RBP7.41□□□□□ -1.22
CLCN3-201ENST00000347613 SURF6O75683 361 aaKnown RBP7.41□□□□□ -1.22
CLCN3-201ENST00000347613 LARGE1O95461 756 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 PDIA6Q15084 440 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 RBSNQ9H1K0 784 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 TMEM63CQ9P1W3 806 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 SPG7Q9UQ90 795 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 C5P01031 1676 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 SIPA1L3O60292 1781 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-201ENST00000347613 SRGAP3O43295 1099 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 GCP02774 474 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 CAVIN1Q6NZI2 390 aaKnown RBP7.41□□□□□ -1.22
CLCN3-201ENST00000347613 RHPN1Q8TCX5 695 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 ANO2Q9NQ90 1003 aa7.41□□□□□ -1.22
CLCN3-201ENST00000347613 TLR7Q9NYK1 1049 aaKnown RBP7.41□□□□□ -1.22
CLCN3-201ENST00000347613 BTBD11A6QL63 1104 aa7.4□□□□□ -1.22
CLCN3-201ENST00000347613 GADD45BO75293 160 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-201ENST00000347613 UBTFL1P0CB47 393 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-201ENST00000347613 PRIM1P49642 420 aaKnown RBP7.4□□□□□ -1.22
CLCN3-201ENST00000347613 PTH1RQ03431 593 aa7.4□□□□□ -1.22
CLCN3-201ENST00000347613 PSME1Q06323 249 aa7.4□□□□□ -1.22
CLCN3-201ENST00000347613 CNKSR2Q8WXI2 1034 aa7.4□□□□□ -1.22
CLCN3-201ENST00000347613 ADCK5Q3MIX3 580 aa7.4□□□□□ -1.22
CLCN3-201ENST00000347613 CABLES1Q8TDN4 633 aa7.4□□□□□ -1.22
CLCN3-201ENST00000347613 NDUFB9Q9Y6M9 179 aa7.4□□□□□ -1.22
CLCN3-201ENST00000347613 ZNF142P52746 1687 aaPredicted RBP7.4□□□□□ -1.23
CLCN3-201ENST00000347613 MRE11P49959 708 aa7.4□□□□□ -1.23
CLCN3-201ENST00000347613 ST3GAL1Q11201 340 aa7.4□□□□□ -1.23
CLCN3-201ENST00000347613 ZSCAN23Q3MJ62 389 aa7.4□□□□□ -1.23
CLCN3-201ENST00000347613 EPHA10Q5JZY3 1008 aa7.4□□□□□ -1.23
CLCN3-201ENST00000347613 L1TD1Q5T7N2 865 aaKnown RBP7.4□□□□□ -1.23
CLCN3-201ENST00000347613 LMOD2Q6P5Q4 547 aa7.4□□□□□ -1.23
CLCN3-201ENST00000347613 ZNF530Q6P9A1 599 aaPredicted RBP7.4□□□□□ -1.23
CLCN3-201ENST00000347613 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.4□□□□□ -1.23
CLCN3-201ENST00000347613 ARHGEF25Q86VW2 580 aa7.4□□□□□ -1.23
CLCN3-201ENST00000347613 DDX49Q9Y6V7 483 aaKnown RBP7.4□□□□□ -1.23
CLCN3-201ENST00000347613 CRYBG1Q9Y4K1 1723 aa7.4□□□□□ -1.23
CLCN3-201ENST00000347613 RNMTO43148 476 aaKnown RBP7.39□□□□□ -1.23
CLCN3-201ENST00000347613 GIGYF1O75420 1035 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-201ENST00000347613 ZC3H6P61129 1189 aaKnown RBP7.39□□□□□ -1.23
CLCN3-201ENST00000347613 MAP3K2Q9Y2U5 619 aa7.39□□□□□ -1.23
CLCN3-201ENST00000347613 LSG1Q9H089 658 aaKnown RBP7.39□□□□□ -1.23
CLCN3-201ENST00000347613 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.39□□□□□ -1.23
CLCN3-201ENST00000347613 TRPM3Q9HCF6 1732 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-201ENST00000347613 HEG1Q9ULI3 1381 aa7.39□□□□□ -1.23
CLCN3-201ENST00000347613 HMMRO75330 724 aa7.39□□□□□ -1.23
CLCN3-201ENST00000347613 SASH1O94885 1247 aa7.39□□□□□ -1.23
CLCN3-201ENST00000347613 GNAI3P08754 354 aa7.39□□□□□ -1.23
CLCN3-201ENST00000347613 AIMP1Q12904 312 aaKnown RBP7.39□□□□□ -1.23
CLCN3-201ENST00000347613 KLHL40Q2TBA0 621 aa7.39□□□□□ -1.23
CLCN3-201ENST00000347613 CWC27Q6UX04 472 aaKnown RBP7.39□□□□□ -1.23
CLCN3-201ENST00000347613 DNAAF4Q8WXU2 420 aa7.39□□□□□ -1.23
CLCN3-201ENST00000347613 EDC3Q96F86 508 aaKnown RBP7.39□□□□□ -1.23
CLCN3-201ENST00000347613 GBP4Q96PP9 640 aa7.39□□□□□ -1.23
CLCN3-201ENST00000347613 SRCIN1Q9C0H9 1055 aa7.39□□□□□ -1.23
CLCN3-201ENST00000347613 RPAP1Q9BWH6 1393 aaPredicted RBP7.38□□□□□ -1.23
CLCN3-201ENST00000347613 IGKV5-2P06315 115 aa7.38□□□□□ -1.23
CLCN3-201ENST00000347613 NCLP19338 710 aaKnown RBP7.38□□□□□ -1.23
CLCN3-201ENST00000347613 SLFNL1Q499Z3 407 aa7.38□□□□□ -1.23
CLCN3-201ENST00000347613 ANKRD24Q8TF21 1146 aa7.38□□□□□ -1.23
CLCN3-201ENST00000347613 SUCLG2Q96I99 432 aa7.38□□□□□ -1.23
CLCN3-201ENST00000347613 SNX14Q9Y5W7 946 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms