RNA–Protein interactions for RNA: ENST00000346691.9

ATRIP-202, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-202ENST00000346691 CDC45O75419 566 aa23.02■■□□□ 1.28
ATRIP-202ENST00000346691 GSE1Q14687 1217 aa23.02■■□□□ 1.28
ATRIP-202ENST00000346691 SPRYD3Q8NCJ5 442 aa23.02■■□□□ 1.28
ATRIP-202ENST00000346691 MAP3K2Q9Y2U5 619 aa23.02■■□□□ 1.28
ATRIP-202ENST00000346691 SDSP20132 328 aa23.01■■□□□ 1.27
ATRIP-202ENST00000346691 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.01■■□□□ 1.27
ATRIP-202ENST00000346691 AIMP1Q12904 312 aaKnown RBP23.01■■□□□ 1.27
ATRIP-202ENST00000346691 PDIA6Q15084 440 aa23.01■■□□□ 1.27
ATRIP-202ENST00000346691 ABCA3Q99758 1704 aa23.01■■□□□ 1.27
ATRIP-202ENST00000346691 RBM25P49756 843 aaKnown RBP23■■□□□ 1.27
ATRIP-202ENST00000346691 ZNF496Q96IT1 587 aaPredicted RBP23■■□□□ 1.27
ATRIP-202ENST00000346691 PPP1R42Q7Z4L9 355 aa23■■□□□ 1.27
ATRIP-202ENST00000346691 PIP4K2AP48426 406 aaPredicted RBP22.99■■□□□ 1.27
ATRIP-202ENST00000346691 CWF19L2Q2TBE0 894 aaKnown RBP22.99■■□□□ 1.27
ATRIP-202ENST00000346691 TOM1L2Q6ZVM7 507 aa22.99■■□□□ 1.27
ATRIP-202ENST00000346691 IBTKQ9P2D0 1353 aaPredicted RBP22.99■■□□□ 1.27
ATRIP-202ENST00000346691 LRRCC1Q9C099 1032 aa22.99■■□□□ 1.27
ATRIP-202ENST00000346691 PDE1AP54750 535 aa22.98■■□□□ 1.27
ATRIP-202ENST00000346691 WDR17Q8IZU2 1322 aa22.98■■□□□ 1.27
ATRIP-202ENST00000346691 MYL6BP14649 208 aa22.98■■□□□ 1.27
ATRIP-202ENST00000346691 DCAF5Q96JK2 942 aa22.98■■□□□ 1.27
ATRIP-202ENST00000346691 KIF2CQ99661 725 aa22.98■■□□□ 1.27
ATRIP-202ENST00000346691 COL5A2P05997 1499 aaPredicted RBP22.97■■□□□ 1.27
ATRIP-202ENST00000346691 SSH3Q8TE77 659 aa22.97■■□□□ 1.27
ATRIP-202ENST00000346691 KSR2Q6VAB6 950 aa22.97■■□□□ 1.27
ATRIP-202ENST00000346691 STRN4Q9NRL3 753 aa22.97■■□□□ 1.27
ATRIP-202ENST00000346691 SALL3Q9BXA9 1300 aa22.96■■□□□ 1.27
ATRIP-202ENST00000346691 CHMP4AQ9BY43 222 aa22.96■■□□□ 1.27
ATRIP-202ENST00000346691 IL1RAPL2Q9NP60 686 aa22.96■■□□□ 1.27
ATRIP-202ENST00000346691 PRKCSHP14314 528 aaPredicted RBP22.96■■□□□ 1.27
ATRIP-202ENST00000346691 DDX21Q9NR30 783 aaKnown RBP eCLIP22.96■■□□□ 1.27
ATRIP-202ENST00000346691 USP16Q9Y5T5 823 aa22.96■■□□□ 1.27
ATRIP-202ENST00000346691 MRC1P22897 1456 aa22.95■■□□□ 1.27
ATRIP-202ENST00000346691 SRGAP3O43295 1099 aa22.95■■□□□ 1.26
ATRIP-202ENST00000346691 HYPKQ9NX55 129 aa22.95■■□□□ 1.26
ATRIP-202ENST00000346691 POLA2Q14181 598 aa22.94■■□□□ 1.26
ATRIP-202ENST00000346691 LARP1Q6PKG0 1096 aaKnown RBP22.93■■□□□ 1.26
ATRIP-202ENST00000346691 RBM42Q9BTD8 480 aaKnown RBP22.93■■□□□ 1.26
ATRIP-202ENST00000346691 ANTXR1Q9H6X2 564 aa22.93■■□□□ 1.26
ATRIP-202ENST00000346691 SURF6O75683 361 aaKnown RBP22.93■■□□□ 1.26
ATRIP-202ENST00000346691 CABP4P57796 275 aa22.93■■□□□ 1.26
ATRIP-202ENST00000346691 NHSL1Q5SYE7 1610 aa22.92■■□□□ 1.26
ATRIP-202ENST00000346691 FRAT2O75474 233 aaPredicted RBP22.92■■□□□ 1.26
ATRIP-202ENST00000346691 OSBPL3Q9H4L5 887 aa22.92■■□□□ 1.26
ATRIP-202ENST00000346691 PARP4Q9UKK3 1724 aaKnown RBP22.92■■□□□ 1.26
ATRIP-202ENST00000346691 BRPF3Q9ULD4 1205 aa22.92■■□□□ 1.26
ATRIP-202ENST00000346691 TTC5Q8N0Z6 440 aa22.91■■□□□ 1.26
ATRIP-202ENST00000346691 TUBGCP6Q96RT7 1819 aa22.91■■□□□ 1.26
ATRIP-202ENST00000346691 MX1P20591 662 aa22.91■■□□□ 1.26
ATRIP-202ENST00000346691 ZCRB1Q8TBF4 217 aaKnown RBP22.91■■□□□ 1.26
ATRIP-202ENST00000346691 XAGE3Q8WTP9 111 aa22.91■■□□□ 1.26
ATRIP-202ENST00000346691 C9orf78Q9NZ63 289 aaPredicted RBP22.91■■□□□ 1.26
ATRIP-202ENST00000346691 CD2BP2O95400 341 aaKnown RBP22.9■■□□□ 1.26
ATRIP-202ENST00000346691 NUTM1Q86Y26 1132 aa22.9■■□□□ 1.26
ATRIP-202ENST00000346691 GLI3P10071 1580 aa22.9■■□□□ 1.26
ATRIP-202ENST00000346691 COPS6Q7L5N1 327 aa22.89■■□□□ 1.25
ATRIP-202ENST00000346691 DDX54Q8TDD1 881 aaKnown RBP22.89■■□□□ 1.25
ATRIP-202ENST00000346691 ALDH1L1O75891 902 aa22.88■■□□□ 1.25
ATRIP-202ENST00000346691 IGKV5-2P06315 115 aa22.88■■□□□ 1.25
ATRIP-202ENST00000346691 HSP90AB1P08238 724 aaKnown RBP22.88■■□□□ 1.25
ATRIP-202ENST00000346691 SNRPA1P09661 255 aaKnown RBP22.88■■□□□ 1.25
ATRIP-202ENST00000346691 LRP10Q7Z4F1 713 aa22.88■■□□□ 1.25
ATRIP-202ENST00000346691 RIC3Q7Z5B4 369 aa22.88■■□□□ 1.25
ATRIP-202ENST00000346691 SHANK3Q9BYB0 1731 aa22.87■■□□□ 1.25
ATRIP-202ENST00000346691 FMNL2Q96PY5 1086 aa22.87■■□□□ 1.25
ATRIP-202ENST00000346691 PCDH11XQ9BZA7 1347 aa22.87■■□□□ 1.25
ATRIP-202ENST00000346691 PCDH11YQ9BZA8 1340 aa22.87■■□□□ 1.25
ATRIP-202ENST00000346691 UNC5CLQ8IV45 518 aa22.87■■□□□ 1.25
ATRIP-202ENST00000346691 HSCBQ8IWL3 235 aa22.87■■□□□ 1.25
ATRIP-202ENST00000346691 RHPN1Q8TCX5 695 aa22.87■■□□□ 1.25
ATRIP-202ENST00000346691 KAZALD1Q96I82 304 aa22.87■■□□□ 1.25
ATRIP-202ENST00000346691 IL2RBP14784 551 aa22.86■■□□□ 1.25
ATRIP-202ENST00000346691 EVA1CP58658 441 aa22.86■■□□□ 1.25
ATRIP-202ENST00000346691 LINS1Q8NG48 757 aa22.86■■□□□ 1.25
ATRIP-202ENST00000346691 SUCLG2Q96I99 432 aa22.86■■□□□ 1.25
ATRIP-202ENST00000346691 PA2G4Q9UQ80 394 aaKnown RBP22.86■■□□□ 1.25
ATRIP-202ENST00000346691 DDX58O95786 925 aaKnown RBP22.86■■□□□ 1.25
ATRIP-202ENST00000346691 CARD10Q9BWT7 1032 aa22.86■■□□□ 1.25
ATRIP-202ENST00000346691 USP26Q9BXU7 913 aa22.86■■□□□ 1.25
ATRIP-202ENST00000346691 PLEKHG2Q9H7P9 1386 aa22.85■■□□□ 1.25
ATRIP-202ENST00000346691 JARID2Q92833 1246 aaPredicted RBP22.85■■□□□ 1.25
ATRIP-202ENST00000346691 GRM8O00222 908 aa22.84■■□□□ 1.25
ATRIP-202ENST00000346691 MYD88Q99836 296 aa22.84■■□□□ 1.25
ATRIP-202ENST00000346691 RILPL2Q969X0 211 aa22.84■■□□□ 1.25
ATRIP-202ENST00000346691 STAP2Q9UGK3 403 aa22.84■■□□□ 1.25
ATRIP-202ENST00000346691 MAP4K4O95819 1239 aaPredicted RBP22.83■■□□□ 1.25
ATRIP-202ENST00000346691 TRIM6-TRIM34B2RNG4 842 aa22.83■■□□□ 1.25
ATRIP-202ENST00000346691 RAB11FIP3O75154 756 aa22.83■■□□□ 1.25
ATRIP-202ENST00000346691 BICC1Q9H694 974 aaKnown RBP22.83■■□□□ 1.25
ATRIP-202ENST00000346691 SNX21Q969T3 373 aa22.82■■□□□ 1.24
ATRIP-202ENST00000346691 MTX1Q13505 466 aa22.82■■□□□ 1.24
ATRIP-202ENST00000346691 NEURL1BA8MQ27 555 aa22.81■■□□□ 1.24
ATRIP-202ENST00000346691 CASC1Q6TDU7 716 aa22.81■■□□□ 1.24
ATRIP-202ENST00000346691 KIF1BPQ96EK5 621 aa22.81■■□□□ 1.24
ATRIP-202ENST00000346691 BTG4Q9NY30 223 aa22.81■■□□□ 1.24
ATRIP-202ENST00000346691 PTCD1O75127 700 aaKnown RBP22.8■■□□□ 1.24
ATRIP-202ENST00000346691 OS9Q13438 667 aaPredicted RBP22.8■■□□□ 1.24
ATRIP-202ENST00000346691 ANKRD13DQ6ZTN6 518 aa22.8■■□□□ 1.24
ATRIP-202ENST00000346691 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.8■■□□□ 1.24
ATRIP-202ENST00000346691 LAMB4A4D0S4 1761 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms