RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.92□□□□□ -0.18
ECM1-201ENST00000346569 F6X3S4 739 aa13.91□□□□□ -0.18
ECM1-201ENST00000346569 ONECUT3O60422 494 aaPredicted RBP13.91□□□□□ -0.18
ECM1-201ENST00000346569 RBM6P78332 1123 aaKnown RBP13.91□□□□□ -0.18
ECM1-201ENST00000346569 FAM98CQ17RN3 349 aaKnown RBP13.91□□□□□ -0.18
ECM1-201ENST00000346569 CENPQQ7L2Z9 268 aaPredicted RBP13.91□□□□□ -0.18
ECM1-201ENST00000346569 QTRT2Q9H974 415 aaKnown RBP13.91□□□□□ -0.18
ECM1-201ENST00000346569 FKBP5Q13451 457 aaPredicted RBP13.9□□□□□ -0.18
ECM1-201ENST00000346569 PROSER3Q2NL68 480 aa13.9□□□□□ -0.18
ECM1-201ENST00000346569 LRP10Q7Z4F1 713 aa13.9□□□□□ -0.18
ECM1-201ENST00000346569 ATG3Q9NT62 314 aa13.9□□□□□ -0.18
ECM1-201ENST00000346569 HYPKQ9NX55 129 aa13.9□□□□□ -0.18
ECM1-201ENST00000346569 ASAP1Q9ULH1 1129 aa13.9□□□□□ -0.18
ECM1-201ENST00000346569 WNK3Q9BYP7 1800 aa13.9□□□□□ -0.18
ECM1-201ENST00000346569 BCL9O00512 1426 aa13.9□□□□□ -0.18
ECM1-201ENST00000346569 ANXA1P04083 346 aa13.9□□□□□ -0.19
ECM1-201ENST00000346569 PRIM1P49642 420 aaKnown RBP13.9□□□□□ -0.19
ECM1-201ENST00000346569 CCT4P50991 539 aaKnown RBP13.9□□□□□ -0.19
ECM1-201ENST00000346569 GJD4Q96KN9 370 aaPredicted RBP13.9□□□□□ -0.19
ECM1-201ENST00000346569 TOGARAM1Q9Y4F4 1720 aa13.89□□□□□ -0.19
ECM1-201ENST00000346569 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
ECM1-201ENST00000346569 SRCAPQ6ZRS2 3230 aa13.88□□□□□ -0.19
ECM1-201ENST00000346569 KCPQ6ZWJ8 1503 aa13.88□□□□□ -0.19
ECM1-201ENST00000346569 GLI3P10071 1580 aa13.88□□□□□ -0.19
ECM1-201ENST00000346569 PTCD1O75127 700 aaKnown RBP13.88□□□□□ -0.19
ECM1-201ENST00000346569 HDAC1Q13547 482 aaPredicted RBP13.88□□□□□ -0.19
ECM1-201ENST00000346569 UPF1Q92900 1129 aaKnown RBP eCLIP13.88□□□□□ -0.19
ECM1-201ENST00000346569 RWDD1Q9H446 243 aaPredicted RBP13.88□□□□□ -0.19
ECM1-201ENST00000346569 TRPC5Q9UL62 973 aaPredicted RBP13.88□□□□□ -0.19
ECM1-201ENST00000346569 ERBB4Q15303 1308 aa13.87□□□□□ -0.19
ECM1-201ENST00000346569 PI4KAP2A4QPH2 592 aa13.87□□□□□ -0.19
ECM1-201ENST00000346569 SLC4A10Q6U841 1118 aa13.87□□□□□ -0.19
ECM1-201ENST00000346569 KSR2Q6VAB6 950 aa13.87□□□□□ -0.19
ECM1-201ENST00000346569 PELP1Q8IZL8 1130 aaKnown RBP13.87□□□□□ -0.19
ECM1-201ENST00000346569 PI4KAP1Q8N8J0 262 aa13.87□□□□□ -0.19
ECM1-201ENST00000346569 PAPPAQ13219 1627 aa13.87□□□□□ -0.19
ECM1-201ENST00000346569 DNAAF4Q8WXU2 420 aa13.86□□□□□ -0.19
ECM1-201ENST00000346569 TEX13AQ9BXU3 409 aaPredicted RBP13.86□□□□□ -0.19
ECM1-201ENST00000346569 UBR2Q8IWV8 1755 aa13.86□□□□□ -0.19
ECM1-201ENST00000346569 ITGB4P16144 1822 aa13.85□□□□□ -0.19
ECM1-201ENST00000346569 NBPF26B4DH59 902 aa13.85□□□□□ -0.19
ECM1-201ENST00000346569 BEND3Q5T5X7 828 aa13.85□□□□□ -0.19
ECM1-201ENST00000346569 NBPF14Q5TI25 921 aa13.85□□□□□ -0.19
ECM1-201ENST00000346569 NBPF10Q6P3W6 841 aaKnown RBP13.85□□□□□ -0.19
ECM1-201ENST00000346569 NBPF15Q8N660 670 aa13.85□□□□□ -0.19
ECM1-201ENST00000346569 SLC4A9Q96Q91 983 aa13.85□□□□□ -0.19
ECM1-201ENST00000346569 MEIS3Q99687 375 aa13.85□□□□□ -0.19
ECM1-201ENST00000346569 ADCY9O60503 1353 aa13.85□□□□□ -0.19
ECM1-201ENST00000346569 A1BGP04217 495 aa13.84□□□□□ -0.19
ECM1-201ENST00000346569 COPS6Q7L5N1 327 aa13.84□□□□□ -0.19
ECM1-201ENST00000346569 SIRT2Q8IXJ6 389 aa13.84□□□□□ -0.19
ECM1-201ENST00000346569 ACSBG1Q96GR2 724 aa13.84□□□□□ -0.19
ECM1-201ENST00000346569 USP44Q9H0E7 712 aa13.84□□□□□ -0.19
ECM1-201ENST00000346569 C5P01031 1676 aa13.84□□□□□ -0.19
ECM1-201ENST00000346569 MYL6BP14649 208 aa13.83□□□□□ -0.2
ECM1-201ENST00000346569 XAGE3Q8WTP9 111 aa13.83□□□□□ -0.2
ECM1-201ENST00000346569 SYTL4Q96C24 671 aaPredicted RBP13.83□□□□□ -0.2
ECM1-201ENST00000346569 PXDNLA1KZ92 1463 aa13.83□□□□□ -0.2
ECM1-201ENST00000346569 KCNQ2O43526 872 aa13.82□□□□□ -0.2
ECM1-201ENST00000346569 DDX58O95786 925 aaKnown RBP13.82□□□□□ -0.2
ECM1-201ENST00000346569 DNAJC10Q8IXB1 793 aa13.82□□□□□ -0.2
ECM1-201ENST00000346569 RPAP2Q8IXW5 612 aaPredicted RBP13.82□□□□□ -0.2
ECM1-201ENST00000346569 SMC5Q8IY18 1101 aa13.82□□□□□ -0.2
ECM1-201ENST00000346569 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
ECM1-201ENST00000346569 SRCIN1Q9C0H9 1055 aa13.82□□□□□ -0.2
ECM1-201ENST00000346569 MAP3K2Q9Y2U5 619 aa13.82□□□□□ -0.2
ECM1-201ENST00000346569 ATP10DQ9P241 1426 aa13.82□□□□□ -0.2
ECM1-201ENST00000346569 ALDH1L1O75891 902 aa13.81□□□□□ -0.2
ECM1-201ENST00000346569 GNAI3P08754 354 aa13.81□□□□□ -0.2
ECM1-201ENST00000346569 PIP4K2AP48426 406 aaPredicted RBP13.81□□□□□ -0.2
ECM1-201ENST00000346569 AIMP1Q12904 312 aaKnown RBP13.81□□□□□ -0.2
ECM1-201ENST00000346569 ANKRD13DQ6ZTN6 518 aa13.81□□□□□ -0.2
ECM1-201ENST00000346569 ANKRD44Q8N8A2 993 aa13.81□□□□□ -0.2
ECM1-201ENST00000346569 C1orf115Q9H7X2 142 aa13.81□□□□□ -0.2
ECM1-201ENST00000346569 THSD7AQ9UPZ6 1657 aa13.81□□□□□ -0.2
ECM1-201ENST00000346569 CYP19A1P11511 503 aaPredicted RBP13.81□□□□□ -0.2
ECM1-201ENST00000346569 SEPT12Q8IYM1 358 aa13.81□□□□□ -0.2
ECM1-201ENST00000346569 IBTKQ9P2D0 1353 aaPredicted RBP13.81□□□□□ -0.2
ECM1-201ENST00000346569 KAT6BQ8WYB5 2073 aa13.8□□□□□ -0.2
ECM1-201ENST00000346569 STARD3NLO95772 234 aa13.8□□□□□ -0.2
ECM1-201ENST00000346569 GNAI2P04899 355 aa13.8□□□□□ -0.2
ECM1-201ENST00000346569 CEP85Q6P2H3 762 aa13.8□□□□□ -0.2
ECM1-201ENST00000346569 LINS1Q8NG48 757 aa13.8□□□□□ -0.2
ECM1-201ENST00000346569 METTL22Q9BUU2 404 aaPredicted RBP13.8□□□□□ -0.2
ECM1-201ENST00000346569 IGKV5-2P06315 115 aa13.79□□□□□ -0.2
ECM1-201ENST00000346569 RIC3Q7Z5B4 369 aa13.79□□□□□ -0.2
ECM1-201ENST00000346569 PLBD2Q8NHP8 589 aa13.79□□□□□ -0.2
ECM1-201ENST00000346569 SMARCC1Q92922 1105 aaPredicted RBP13.79□□□□□ -0.2
ECM1-201ENST00000346569 LAMB4A4D0S4 1761 aa13.78□□□□□ -0.2
ECM1-201ENST00000346569 TTLL7Q6ZT98 887 aa13.78□□□□□ -0.2
ECM1-201ENST00000346569 SKAP1Q86WV1 359 aa13.78□□□□□ -0.2
ECM1-201ENST00000346569 PDZRN3Q9UPQ7 1066 aa13.78□□□□□ -0.2
ECM1-201ENST00000346569 UTYO14607 1347 aa13.78□□□□□ -0.2
ECM1-201ENST00000346569 DOT1LQ8TEK3 1739 aa13.78□□□□□ -0.2
ECM1-201ENST00000346569 LOC102724428A0A0B4J2F2 783 aa13.77□□□□□ -0.21
ECM1-201ENST00000346569 A0A0G2JS52 829 aa13.77□□□□□ -0.21
ECM1-201ENST00000346569 SIK1P57059 783 aa13.77□□□□□ -0.21
ECM1-201ENST00000346569 ATP8B2P98198 1209 aa13.77□□□□□ -0.21
ECM1-201ENST00000346569 MYT1Q01538 1121 aa13.77□□□□□ -0.21
ECM1-201ENST00000346569 DCTPP1Q9H773 170 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms