RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 PIM2Q9P1W9 311 aa17.69■□□□□ 0.42
HERPUD1-202ENST00000344114 DLG5Q8TDM6 1919 aa17.69■□□□□ 0.42
HERPUD1-202ENST00000344114 SCN11AQ9UI33 1791 aa17.68■□□□□ 0.42
HERPUD1-202ENST00000344114 FSTL1Q12841 308 aa17.68■□□□□ 0.42
HERPUD1-202ENST00000344114 PLEKHO1Q53GL0 409 aaPredicted RBP17.68■□□□□ 0.42
HERPUD1-202ENST00000344114 USP42Q9H9J4 1324 aaKnown RBP17.68■□□□□ 0.42
HERPUD1-202ENST00000344114 CRKLP46109 303 aaKnown RBP17.67■□□□□ 0.42
HERPUD1-202ENST00000344114 CABP4P57796 275 aa17.67■□□□□ 0.42
HERPUD1-202ENST00000344114 JMYQ8N9B5 988 aa17.67■□□□□ 0.42
HERPUD1-202ENST00000344114 KLRG1Q96E93 195 aa17.67■□□□□ 0.42
HERPUD1-202ENST00000344114 DDR1Q08345 913 aa17.66■□□□□ 0.42
HERPUD1-202ENST00000344114 AMOTQ4VCS5 1084 aa17.66■□□□□ 0.42
HERPUD1-202ENST00000344114 ZNF530Q6P9A1 599 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-202ENST00000344114 C16orf71Q8IYS4 520 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-202ENST00000344114 AFDNP55196 1824 aaKnown RBP17.66■□□□□ 0.42
HERPUD1-202ENST00000344114 KDM2BQ8NHM5 1336 aa17.66■□□□□ 0.42
HERPUD1-202ENST00000344114 DLEC1Q9Y238 1755 aa17.66■□□□□ 0.42
HERPUD1-202ENST00000344114 FKBP8Q14318 412 aa17.66■□□□□ 0.42
HERPUD1-202ENST00000344114 DALRD3Q5D0E6 543 aaKnown RBP17.66■□□□□ 0.42
HERPUD1-202ENST00000344114 NRXN2Q9P2S2 1712 aa17.66■□□□□ 0.42
HERPUD1-202ENST00000344114 SRP68Q9UHB9 627 aaKnown RBP17.66■□□□□ 0.42
HERPUD1-202ENST00000344114 SUPT16HQ9Y5B9 1047 aaKnown RBP17.66■□□□□ 0.42
HERPUD1-202ENST00000344114 HTRA3P83110 453 aa17.65■□□□□ 0.42
HERPUD1-202ENST00000344114 RNF181Q9P0P0 153 aa17.65■□□□□ 0.42
HERPUD1-202ENST00000344114 VIRMAQ69YN4 1812 aaKnown RBP17.64■□□□□ 0.41
HERPUD1-202ENST00000344114 PTCD1O75127 700 aaKnown RBP17.64■□□□□ 0.41
HERPUD1-202ENST00000344114 ZNF521Q96K83 1311 aa17.63■□□□□ 0.41
HERPUD1-202ENST00000344114 POLRMTO00411 1230 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-202ENST00000344114 TM4SF1P30408 202 aa17.63■□□□□ 0.41
HERPUD1-202ENST00000344114 CCDC146Q8IYE0 955 aa17.63■□□□□ 0.41
HERPUD1-202ENST00000344114 RUNDC1Q96C34 613 aa17.63■□□□□ 0.41
HERPUD1-202ENST00000344114 CHRNA5P30532 468 aa17.62■□□□□ 0.41
HERPUD1-202ENST00000344114 NFATC2IPQ8NCF5 419 aa17.62■□□□□ 0.41
HERPUD1-202ENST00000344114 RRAGCQ9HB90 399 aa17.62■□□□□ 0.41
HERPUD1-202ENST00000344114 SALL2Q9Y467 1007 aaPredicted RBP17.62■□□□□ 0.41
HERPUD1-202ENST00000344114 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
HERPUD1-202ENST00000344114 C1orf141Q5JVX7 400 aa17.61■□□□□ 0.41
HERPUD1-202ENST00000344114 COL13A1Q5TAT6 717 aaPredicted RBP17.61■□□□□ 0.41
HERPUD1-202ENST00000344114 INTS5Q6P9B9 1019 aaKnown RBP17.61■□□□□ 0.41
HERPUD1-202ENST00000344114 AEBP1Q8IUX7 1158 aa17.61■□□□□ 0.41
HERPUD1-202ENST00000344114 CCDC88AQ3V6T2 1871 aa17.6■□□□□ 0.41
HERPUD1-202ENST00000344114 ZC3H4Q9UPT8 1303 aaKnown RBP17.6■□□□□ 0.41
HERPUD1-202ENST00000344114 TIAM2Q8IVF5 1701 aa17.6■□□□□ 0.41
HERPUD1-202ENST00000344114 APAF1O14727 1248 aa17.6■□□□□ 0.41
HERPUD1-202ENST00000344114 DIAPH1O60610 1272 aaKnown RBP17.6■□□□□ 0.41
HERPUD1-202ENST00000344114 MRC1P22897 1456 aa17.59■□□□□ 0.41
HERPUD1-202ENST00000344114 U2AF1L5P0DN76 240 aaPredicted RBP17.58■□□□□ 0.4
HERPUD1-202ENST00000344114 U2AF1Q01081 240 aaKnown RBP eCLIP17.58■□□□□ 0.4
HERPUD1-202ENST00000344114 ERICH6BQ5W0A0 696 aa17.58■□□□□ 0.4
HERPUD1-202ENST00000344114 SMC1BQ8NDV3 1235 aa17.58■□□□□ 0.4
HERPUD1-202ENST00000344114 SOS1Q07889 1333 aaPredicted RBP17.58■□□□□ 0.4
HERPUD1-202ENST00000344114 RNF123Q5XPI4 1314 aa17.58■□□□□ 0.4
HERPUD1-202ENST00000344114 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
HERPUD1-202ENST00000344114 USPL1Q5W0Q7 1092 aa17.57■□□□□ 0.4
HERPUD1-202ENST00000344114 PNNQ9H307 717 aaKnown RBP17.57■□□□□ 0.4
HERPUD1-202ENST00000344114 RASSF7Q02833 373 aa17.56■□□□□ 0.4
HERPUD1-202ENST00000344114 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
HERPUD1-202ENST00000344114 ZPR1O75312 459 aa17.55■□□□□ 0.4
HERPUD1-202ENST00000344114 PRELPP51888 382 aa17.55■□□□□ 0.4
HERPUD1-202ENST00000344114 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
HERPUD1-202ENST00000344114 UBR2Q8IWV8 1755 aa17.55■□□□□ 0.4
HERPUD1-202ENST00000344114 U2SURPO15042 1029 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-202ENST00000344114 CYP19A1P11511 503 aaPredicted RBP17.54■□□□□ 0.4
HERPUD1-202ENST00000344114 AKAP4Q5JQC9 854 aa17.54■□□□□ 0.4
HERPUD1-202ENST00000344114 CDCA7LQ96GN5 454 aa17.54■□□□□ 0.4
HERPUD1-202ENST00000344114 SLC52A2Q9HAB3 445 aa17.54■□□□□ 0.4
HERPUD1-202ENST00000344114 NARFQ9UHQ1 456 aa17.54■□□□□ 0.4
HERPUD1-202ENST00000344114 COL15A1P39059 1388 aa17.54■□□□□ 0.4
HERPUD1-202ENST00000344114 GLTPD2A6NH11 291 aa17.53■□□□□ 0.4
HERPUD1-202ENST00000344114 LMNB1P20700 586 aa17.53■□□□□ 0.4
HERPUD1-202ENST00000344114 IL13P35225 146 aa17.53■□□□□ 0.4
HERPUD1-202ENST00000344114 NFIXQ14938 502 aa17.53■□□□□ 0.4
HERPUD1-202ENST00000344114 CCDC27Q2M243 656 aa17.53■□□□□ 0.4
HERPUD1-202ENST00000344114 DICER1Q9UPY3 1922 aaKnown RBP17.53■□□□□ 0.4
HERPUD1-202ENST00000344114 BCL2L12Q9HB09 334 aa17.53■□□□□ 0.4
HERPUD1-202ENST00000344114 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
HERPUD1-202ENST00000344114 ANKRD31Q8N7Z5 1873 aa17.52■□□□□ 0.4
HERPUD1-202ENST00000344114 E9PSI1 815 aa17.52■□□□□ 0.39
HERPUD1-202ENST00000344114 VEGFAP15692 232 aaPredicted RBP17.52■□□□□ 0.39
HERPUD1-202ENST00000344114 SLFN5Q08AF3 891 aa17.52■□□□□ 0.39
HERPUD1-202ENST00000344114 PLEKHF1Q96S99 279 aa17.52■□□□□ 0.39
HERPUD1-202ENST00000344114 LGR6Q9HBX8 967 aa17.52■□□□□ 0.39
HERPUD1-202ENST00000344114 RCAN3Q9UKA8 241 aa17.52■□□□□ 0.39
HERPUD1-202ENST00000344114 PCNTO95613 3336 aa17.51■□□□□ 0.39
HERPUD1-202ENST00000344114 FER1L6Q2WGJ9 1857 aa17.51■□□□□ 0.39
HERPUD1-202ENST00000344114 SERPINB2P05120 415 aa17.51■□□□□ 0.39
HERPUD1-202ENST00000344114 DUSP27Q5VZP5 1158 aa17.51■□□□□ 0.39
HERPUD1-202ENST00000344114 TNS4Q8IZW8 715 aa17.51■□□□□ 0.39
HERPUD1-202ENST00000344114 TTLL6Q8N841 843 aa17.51■□□□□ 0.39
HERPUD1-202ENST00000344114 ZBTB1Q9Y2K1 713 aa17.51■□□□□ 0.39
HERPUD1-202ENST00000344114 RNMTO43148 476 aaKnown RBP17.5■□□□□ 0.39
HERPUD1-202ENST00000344114 SLC39A6Q13433 755 aa17.5■□□□□ 0.39
HERPUD1-202ENST00000344114 WWC1Q8IX03 1113 aa17.5■□□□□ 0.39
HERPUD1-202ENST00000344114 TRMT2AQ8IZ69 625 aaKnown RBP17.5■□□□□ 0.39
HERPUD1-202ENST00000344114 CARMIL3Q8ND23 1372 aa17.5■□□□□ 0.39
HERPUD1-202ENST00000344114 SCN7AQ01118 1682 aa17.49■□□□□ 0.39
HERPUD1-202ENST00000344114 NFKBIEO00221 500 aa17.49■□□□□ 0.39
HERPUD1-202ENST00000344114 WDR63Q8IWG1 891 aa17.49■□□□□ 0.39
HERPUD1-202ENST00000344114 VSIG10Q8N0Z9 540 aa17.49■□□□□ 0.39
HERPUD1-202ENST00000344114 COL11A2P13942 1736 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms