RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.6□□□□□ -1.51
CSMD3-203ENST00000343508 ANKRD44Q8N8A2 993 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 CCDC148Q8NFR7 591 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 ESYT1Q9BSJ8 1104 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 TTC12Q9H892 705 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-203ENST00000343508 ANO6Q4KMQ2 910 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 GDPD2Q9HCC8 539 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 MBD5Q9P267 1494 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 CFAP65Q6ZU64 1925 aaKnown RBP5.59□□□□□ -1.51
CSMD3-203ENST00000343508 LAMC1P11047 1609 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 FOSBP53539 338 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 ZNF330Q9Y3S2 320 aaPredicted RBP5.59□□□□□ -1.51
CSMD3-203ENST00000343508 ATP10BO94823 1461 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 GIMAP6Q6P9H5 292 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 ADGRF5Q8IZF2 1346 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 MAGEC2Q9UBF1 373 aaPredicted RBP5.59□□□□□ -1.51
CSMD3-203ENST00000343508 SHTN1A0MZ66 631 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 URI1O94763 535 aaPredicted RBP5.59□□□□□ -1.51
CSMD3-203ENST00000343508 CRACR2AQ9BSW2 395 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 KDM5BQ9UGL1 1544 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 ADGRL1O94910 1474 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 NOS1P29475 1434 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 WASHC4Q2M389 1173 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 CCDC181Q5TID7 509 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 CKAP2LQ8IYA6 745 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 TRMT2AQ8IZ69 625 aaKnown RBP5.59□□□□□ -1.51
CSMD3-203ENST00000343508 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.59□□□□□ -1.51
CSMD3-203ENST00000343508 ARFGAP3Q9NP61 516 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 CCDC9Q9Y3X0 531 aaKnown RBP5.59□□□□□ -1.51
CSMD3-203ENST00000343508 F13A1P00488 732 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 AACSQ86V21 672 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 CCDC191Q8NCU4 936 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 C14orf93Q9H972 538 aaKnown RBP5.59□□□□□ -1.51
CSMD3-203ENST00000343508 IL1RAPL2Q9NP60 686 aa5.59□□□□□ -1.51
CSMD3-203ENST00000343508 SLU7O95391 586 aaKnown RBP5.59□□□□□ -1.52
CSMD3-203ENST00000343508 TOP1P11387 765 aaKnown RBP5.59□□□□□ -1.52
CSMD3-203ENST00000343508 PDE1AP54750 535 aa5.59□□□□□ -1.52
CSMD3-203ENST00000343508 PLEKHM2Q8IWE5 1019 aa5.59□□□□□ -1.52
CSMD3-203ENST00000343508 HMG20BQ9P0W2 317 aa5.59□□□□□ -1.52
CSMD3-203ENST00000343508 NAP1L1P55209 391 aaKnown RBP5.59□□□□□ -1.52
CSMD3-203ENST00000343508 GABPB1Q06547 395 aaPredicted RBP5.59□□□□□ -1.52
CSMD3-203ENST00000343508 GOLGA6L7A0A1B0GV03 622 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 CCDC158Q5M9N0 1113 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 USP26Q9BXU7 913 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 CEP131Q9UPN4 1083 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 V9GYY5 206 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-203ENST00000343508 PREX2Q70Z35 1606 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 ZBTB7BO15156 539 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-203ENST00000343508 EPB41L2O43491 1005 aaKnown RBP5.58□□□□□ -1.52
CSMD3-203ENST00000343508 SMARCA5O60264 1052 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-203ENST00000343508 ARHGAP29Q52LW3 1261 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 ZSCAN25Q6NSZ9 544 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 ANTXR1Q9H6X2 564 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 SPHKAPQ2M3C7 1700 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 BBXQ8WY36 941 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-203ENST00000343508 CTNNA3Q9UI47 895 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 BRPF1P55201 1214 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-203ENST00000343508 ZNF830Q96NB3 372 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-203ENST00000343508 CDC42BPBQ9Y5S2 1711 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 TTLL5Q6EMB2 1281 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 RBSNQ9H1K0 784 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 SPINK5Q9NQ38 1064 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-203ENST00000343508 MBIPQ9NS73 344 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 U3KPZ7 1027 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-203ENST00000343508 TRIM22Q8IYM9 498 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 CNPY2Q9Y2B0 182 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 CTR9Q6PD62 1173 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 RRS1Q15050 365 aaKnown RBP5.58□□□□□ -1.52
CSMD3-203ENST00000343508 WASF1Q92558 559 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 IQGAP3Q86VI3 1631 aa5.58□□□□□ -1.52
CSMD3-203ENST00000343508 AIMP1Q12904 312 aaKnown RBP5.58□□□□□ -1.52
CSMD3-203ENST00000343508 UTP14CQ5TAP6 766 aaKnown RBP5.57□□□□□ -1.52
CSMD3-203ENST00000343508 KLHL34Q8N239 644 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 MRPL50Q8N5N7 158 aaKnown RBP5.57□□□□□ -1.52
CSMD3-203ENST00000343508 STIM1Q13586 685 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 VPS53Q5VIR6 699 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 KIF24Q5T7B8 1368 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 PRPF40BQ6NWY9 871 aaKnown RBP5.57□□□□□ -1.52
CSMD3-203ENST00000343508 TTC21BQ7Z4L5 1316 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 FANCAO15360 1455 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 TBC1D2BQ9UPU7 963 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 MARCH6O60337 910 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 EPS15P42566 896 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 BTBD11A6QL63 1104 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 ATL3Q6DD88 541 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 LMBRD1Q9NUN5 540 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 SKILP12757 684 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 NUTM1Q86Y26 1132 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 ZGPATQ8N5A5 531 aaKnown RBP5.57□□□□□ -1.52
CSMD3-203ENST00000343508 RBM42Q9BTD8 480 aaKnown RBP5.57□□□□□ -1.52
CSMD3-203ENST00000343508 PSME1Q06323 249 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 TRMT1Q9NXH9 659 aaKnown RBP5.57□□□□□ -1.52
CSMD3-203ENST00000343508 E9PCH4 1651 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 MICALCLQ6ZW33 695 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 IMPACTQ9P2X3 320 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 CCDC61Q9Y6R9 512 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 FLIIQ13045 1269 aa5.57□□□□□ -1.52
CSMD3-203ENST00000343508 PLEKHO1Q53GL0 409 aaPredicted RBP5.57□□□□□ -1.52
CSMD3-203ENST00000343508 SKIDA1Q1XH10 827 aa5.56□□□□□ -1.52
CSMD3-203ENST00000343508 CCDC186Q7Z3E2 898 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms