RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 AFAP1Q8N556 730 aa14.09□□□□□ -0.15
SEMA6A-202ENST00000343348 MKNK2Q9HBH9 465 aa14.09□□□□□ -0.15
SEMA6A-202ENST00000343348 LRRC9Q6ZRR7 1453 aa14.09□□□□□ -0.15
SEMA6A-202ENST00000343348 SLFN5Q08AF3 891 aa14.09□□□□□ -0.15
SEMA6A-202ENST00000343348 CETN2P41208 172 aa14.09□□□□□ -0.15
SEMA6A-202ENST00000343348 TMPOP42166 694 aaKnown RBP14.09□□□□□ -0.15
SEMA6A-202ENST00000343348 GCOM1H8Y6P7 765 aaPredicted RBP14.09□□□□□ -0.15
SEMA6A-202ENST00000343348 MYZAPP0CAP1 466 aa14.09□□□□□ -0.15
SEMA6A-202ENST00000343348 PPM1FP49593 454 aaPredicted RBP14.09□□□□□ -0.15
SEMA6A-202ENST00000343348 HSP90AA4PQ58FG1 418 aa14.09□□□□□ -0.15
SEMA6A-202ENST00000343348 SNW1Q13573 536 aaKnown RBP14.09□□□□□ -0.15
SEMA6A-202ENST00000343348 CCDC96Q2M329 555 aa14.09□□□□□ -0.15
SEMA6A-202ENST00000343348 CCDC175P0C221 793 aa14.08□□□□□ -0.15
SEMA6A-202ENST00000343348 GJB2P29033 226 aa14.08□□□□□ -0.15
SEMA6A-202ENST00000343348 TSHZ3Q63HK5 1081 aa14.08□□□□□ -0.15
SEMA6A-202ENST00000343348 CEP135Q66GS9 1140 aa14.08□□□□□ -0.15
SEMA6A-202ENST00000343348 PROSER2Q86WR7 435 aaPredicted RBP14.08□□□□□ -0.15
SEMA6A-202ENST00000343348 MYD88Q99836 296 aa14.08□□□□□ -0.15
SEMA6A-202ENST00000343348 NOP2P46087 812 aaKnown RBP14.08□□□□□ -0.16
SEMA6A-202ENST00000343348 DUSP27Q5VZP5 1158 aa14.08□□□□□ -0.16
SEMA6A-202ENST00000343348 KIF1BPQ96EK5 621 aa14.08□□□□□ -0.16
SEMA6A-202ENST00000343348 DRC1Q96MC2 740 aa14.08□□□□□ -0.16
SEMA6A-202ENST00000343348 ERBINQ96RT1 1412 aa14.08□□□□□ -0.16
SEMA6A-202ENST00000343348 USO1O60763 962 aaKnown RBP14.08□□□□□ -0.16
SEMA6A-202ENST00000343348 IGHMBP2P38935 993 aaKnown RBP14.08□□□□□ -0.16
SEMA6A-202ENST00000343348 SCLT1Q96NL6 688 aa14.08□□□□□ -0.16
SEMA6A-202ENST00000343348 MMRN2Q9H8L6 949 aa14.08□□□□□ -0.16
SEMA6A-202ENST00000343348 STAMBPO95630 424 aa14.08□□□□□ -0.16
SEMA6A-202ENST00000343348 MCM3P25205 808 aa14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 MTIF2P46199 727 aaKnown RBP14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 MICALCLQ6ZW33 695 aa14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 JADE2Q9NQC1 790 aa14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 WDR97A6NE52 1622 aa14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 IFIT1P09914 478 aaKnown RBP14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 NAPBQ9H115 298 aa14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 CADPSQ9ULU8 1353 aa14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 PTCD1O75127 700 aaKnown RBP14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 CTNNA2P26232 953 aa14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 SSRP1Q08945 709 aaKnown RBP14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 RPAP2Q8IXW5 612 aaPredicted RBP14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 YEATS4O95619 227 aa14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 SMC1AQ14683 1233 aaKnown RBP14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 SCAND2PQ9GZW5 306 aaPredicted RBP14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 NCOA2Q15596 1464 aa14.07□□□□□ -0.16
SEMA6A-202ENST00000343348 GOLGA8BA8MQT2 603 aa14.06□□□□□ -0.16
SEMA6A-202ENST00000343348 TERF1P54274 439 aa14.06□□□□□ -0.16
SEMA6A-202ENST00000343348 SLC12A7Q9Y666 1083 aa14.06□□□□□ -0.16
SEMA6A-202ENST00000343348 HOOK3Q86VS8 718 aa14.06□□□□□ -0.16
SEMA6A-202ENST00000343348 NLRP5P59047 1200 aa14.06□□□□□ -0.16
SEMA6A-202ENST00000343348 GIMAP6Q6P9H5 292 aa14.06□□□□□ -0.16
SEMA6A-202ENST00000343348 USHBP1Q8N6Y0 703 aa14.06□□□□□ -0.16
SEMA6A-202ENST00000343348 GNAT3A8MTJ3 354 aa14.06□□□□□ -0.16
SEMA6A-202ENST00000343348 MYO1BO43795 1136 aa14.06□□□□□ -0.16
SEMA6A-202ENST00000343348 SCAPERQ9BY12 1400 aa14.06□□□□□ -0.16
SEMA6A-202ENST00000343348 VPS36Q86VN1 386 aa14.06□□□□□ -0.16
SEMA6A-202ENST00000343348 TCERG1LQ5VWI1 586 aa14.05□□□□□ -0.16
SEMA6A-202ENST00000343348 GLRX3O76003 335 aaKnown RBP14.05□□□□□ -0.16
SEMA6A-202ENST00000343348 CCDC12Q8WUD4 166 aaPredicted RBP14.05□□□□□ -0.16
SEMA6A-202ENST00000343348 KIF21BO75037 1637 aa14.05□□□□□ -0.16
SEMA6A-202ENST00000343348 ZNF213O14771 459 aa14.05□□□□□ -0.16
SEMA6A-202ENST00000343348 ZC3H6P61129 1189 aaKnown RBP14.05□□□□□ -0.16
SEMA6A-202ENST00000343348 NFE2L2Q16236 605 aa14.05□□□□□ -0.16
SEMA6A-202ENST00000343348 SSH1Q8WYL5 1049 aa14.05□□□□□ -0.16
SEMA6A-202ENST00000343348 VAT1LQ9HCJ6 419 aa14.05□□□□□ -0.16
SEMA6A-202ENST00000343348 PAIP2Q9BPZ3 127 aaKnown RBP14.05□□□□□ -0.16
SEMA6A-202ENST00000343348 CRACR2BQ8N4Y2 399 aaPredicted RBP14.04□□□□□ -0.16
SEMA6A-202ENST00000343348 ANKRD30BQ9BXX2 1392 aa14.04□□□□□ -0.16
SEMA6A-202ENST00000343348 MYCNP04198 464 aaPredicted RBP14.04□□□□□ -0.16
SEMA6A-202ENST00000343348 MNAT1P51948 309 aa14.04□□□□□ -0.16
SEMA6A-202ENST00000343348 LIMCH1Q9UPQ0 1083 aa14.04□□□□□ -0.16
SEMA6A-202ENST00000343348 IFIT3O14879 490 aaKnown RBP14.04□□□□□ -0.16
SEMA6A-202ENST00000343348 STX1AQ16623 288 aa14.04□□□□□ -0.16
SEMA6A-202ENST00000343348 ZMYND15Q9H091 742 aa14.04□□□□□ -0.16
SEMA6A-202ENST00000343348 GOLGA8AA7E2F4 631 aa14.04□□□□□ -0.16
SEMA6A-202ENST00000343348 GNG11P61952 73 aa14.04□□□□□ -0.16
SEMA6A-202ENST00000343348 ZSCAN23Q3MJ62 389 aa14.04□□□□□ -0.16
SEMA6A-202ENST00000343348 HAND2P61296 217 aa14.03□□□□□ -0.16
SEMA6A-202ENST00000343348 NSD3Q9BZ95 1437 aa14.03□□□□□ -0.16
SEMA6A-202ENST00000343348 FANCD2Q9BXW9 1451 aa14.03□□□□□ -0.16
SEMA6A-202ENST00000343348 RTEL1-TNFRSF6BF6WH68 1400 aa14.03□□□□□ -0.16
SEMA6A-202ENST00000343348 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.03□□□□□ -0.16
SEMA6A-202ENST00000343348 V9GYY5 206 aaPredicted RBP14.03□□□□□ -0.16
SEMA6A-202ENST00000343348 HCLS1P14317 486 aaPredicted RBP14.03□□□□□ -0.16
SEMA6A-202ENST00000343348 TNIP1Q15025 636 aa14.03□□□□□ -0.16
SEMA6A-202ENST00000343348 PUF60Q9UHX1 559 aaKnown RBP14.03□□□□□ -0.16
SEMA6A-202ENST00000343348 COMMD10Q9Y6G5 202 aa14.03□□□□□ -0.16
SEMA6A-202ENST00000343348 ALS2CR12Q96Q35 445 aa14.03□□□□□ -0.16
SEMA6A-202ENST00000343348 HOMER2Q9NSB8 354 aa14.02□□□□□ -0.16
SEMA6A-202ENST00000343348 CFTRP13569 1480 aa14.02□□□□□ -0.16
SEMA6A-202ENST00000343348 TAF7Q15545 349 aaPredicted RBP14.02□□□□□ -0.16
SEMA6A-202ENST00000343348 STAC3Q96MF2 364 aa14.02□□□□□ -0.16
SEMA6A-202ENST00000343348 RAD54L2Q9Y4B4 1467 aa14.02□□□□□ -0.16
SEMA6A-202ENST00000343348 PRC1O43663 620 aa14.02□□□□□ -0.17
SEMA6A-202ENST00000343348 STX6O43752 255 aa14.02□□□□□ -0.17
SEMA6A-202ENST00000343348 SH2B1Q9NRF2 756 aaPredicted RBP14.02□□□□□ -0.17
SEMA6A-202ENST00000343348 ANKIB1Q9P2G1 1089 aa14.02□□□□□ -0.17
SEMA6A-202ENST00000343348 CTAGE5O15320 804 aa14.02□□□□□ -0.17
SEMA6A-202ENST00000343348 RARSP54136 660 aaKnown RBP14.02□□□□□ -0.17
SEMA6A-202ENST00000343348 CCDC40Q4G0X9 1142 aa14.02□□□□□ -0.17
SEMA6A-202ENST00000343348 CTCFLQ8NI51 663 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms