RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TMEM87AQ8NBN3 555 aa17.75■□□□□ 0.43
CLCN1-201ENST00000343257 CD163L1Q9NR16 1453 aa17.75■□□□□ 0.43
CLCN1-201ENST00000343257 RPGRIP1LQ68CZ1 1315 aa17.75■□□□□ 0.43
CLCN1-201ENST00000343257 ARID5BQ14865 1188 aa17.75■□□□□ 0.43
CLCN1-201ENST00000343257 ANO6Q4KMQ2 910 aa17.75■□□□□ 0.43
CLCN1-201ENST00000343257 ZCCHC11Q5TAX3 1644 aaKnown RBP17.74■□□□□ 0.43
CLCN1-201ENST00000343257 HSPA4P34932 840 aa17.74■□□□□ 0.43
CLCN1-201ENST00000343257 TYRO3Q06418 890 aa17.74■□□□□ 0.43
CLCN1-201ENST00000343257 TRMT1Q9NXH9 659 aaKnown RBP17.74■□□□□ 0.43
CLCN1-201ENST00000343257 LIMCH1Q9UPQ0 1083 aa17.74■□□□□ 0.43
CLCN1-201ENST00000343257 SLFN14P0C7P3 912 aa17.73■□□□□ 0.43
CLCN1-201ENST00000343257 MROH1Q8NDA8 1641 aa17.73■□□□□ 0.43
CLCN1-201ENST00000343257 FOXO3O43524 673 aa17.73■□□□□ 0.43
CLCN1-201ENST00000343257 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.73■□□□□ 0.43
CLCN1-201ENST00000343257 LRRFIP2Q9Y608 721 aaKnown RBP17.73■□□□□ 0.43
CLCN1-201ENST00000343257 MRVI1Q9Y6F6 885 aa17.73■□□□□ 0.43
CLCN1-201ENST00000343257 FAM200AQ8TCP9 573 aa17.73■□□□□ 0.43
CLCN1-201ENST00000343257 SYTL4Q96C24 671 aaPredicted RBP17.73■□□□□ 0.43
CLCN1-201ENST00000343257 CBX8Q9HC52 389 aa17.73■□□□□ 0.43
CLCN1-201ENST00000343257 KIF24Q5T7B8 1368 aa17.72■□□□□ 0.43
CLCN1-201ENST00000343257 YTHDC2Q9H6S0 1430 aaKnown RBP17.72■□□□□ 0.43
CLCN1-201ENST00000343257 SMTNL1A8MU46 457 aa17.72■□□□□ 0.43
CLCN1-201ENST00000343257 TPM3P06753 285 aa17.72■□□□□ 0.43
CLCN1-201ENST00000343257 MAP3K11Q16584 847 aa17.72■□□□□ 0.43
CLCN1-201ENST00000343257 NUP62CLQ9H1M0 184 aa17.72■□□□□ 0.43
CLCN1-201ENST00000343257 NAP1L2Q9ULW6 460 aaPredicted RBP17.72■□□□□ 0.43
CLCN1-201ENST00000343257 MTMR6Q9Y217 621 aa17.72■□□□□ 0.43
CLCN1-201ENST00000343257 FBXW7Q969H0 707 aa17.72■□□□□ 0.43
CLCN1-201ENST00000343257 TCEANC2Q96MN5 208 aa17.72■□□□□ 0.43
CLCN1-201ENST00000343257 DDX41Q9UJV9 622 aaKnown RBP17.72■□□□□ 0.43
CLCN1-201ENST00000343257 ATP6V1DQ9Y5K8 247 aa17.72■□□□□ 0.43
CLCN1-201ENST00000343257 GOLGA6L4A6NEF3 574 aa17.71■□□□□ 0.43
CLCN1-201ENST00000343257 USP27XA6NNY8 438 aa17.71■□□□□ 0.43
CLCN1-201ENST00000343257 ZSCAN25Q6NSZ9 544 aa17.71■□□□□ 0.43
CLCN1-201ENST00000343257 TTC6Q86TZ1 520 aa17.71■□□□□ 0.43
CLCN1-201ENST00000343257 CACTINQ8WUQ7 758 aaKnown RBP17.71■□□□□ 0.43
CLCN1-201ENST00000343257 DACT1Q9NYF0 836 aa17.71■□□□□ 0.43
CLCN1-201ENST00000343257 A0A087WWV3 80 aa17.71■□□□□ 0.42
CLCN1-201ENST00000343257 CCDC144BQ3MJ40 725 aa17.71■□□□□ 0.42
CLCN1-201ENST00000343257 CCDC144CPQ8IYA2 1237 aa17.71■□□□□ 0.42
CLCN1-201ENST00000343257 JAKMIP1Q96N16 626 aaKnown RBP17.71■□□□□ 0.42
CLCN1-201ENST00000343257 TNMDQ9H2S6 317 aa17.71■□□□□ 0.42
CLCN1-201ENST00000343257 ABCC3O15438 1527 aa17.7■□□□□ 0.42
CLCN1-201ENST00000343257 CHL1O00533 1208 aa17.7■□□□□ 0.42
CLCN1-201ENST00000343257 ADCK5Q3MIX3 580 aa17.7■□□□□ 0.42
CLCN1-201ENST00000343257 KIF18AQ8NI77 898 aa17.7■□□□□ 0.42
CLCN1-201ENST00000343257 DNAJC25Q9H1X3 360 aa17.7■□□□□ 0.42
CLCN1-201ENST00000343257 TSPYL4Q9UJ04 414 aa17.7■□□□□ 0.42
CLCN1-201ENST00000343257 ZNF215Q9UL58 517 aaPredicted RBP17.7■□□□□ 0.42
CLCN1-201ENST00000343257 PTPRCP08575 1304 aa17.7■□□□□ 0.42
CLCN1-201ENST00000343257 CLIP2Q9UDT6 1046 aa17.7■□□□□ 0.42
CLCN1-201ENST00000343257 ZFYVE9O95405 1425 aa17.7■□□□□ 0.42
CLCN1-201ENST00000343257 SALL3Q9BXA9 1300 aa17.69■□□□□ 0.42
CLCN1-201ENST00000343257 CEP135Q66GS9 1140 aa17.69■□□□□ 0.42
CLCN1-201ENST00000343257 COG3Q96JB2 828 aa17.69■□□□□ 0.42
CLCN1-201ENST00000343257 SURF6O75683 361 aaKnown RBP17.69■□□□□ 0.42
CLCN1-201ENST00000343257 KMT5BQ4FZB7 885 aa17.69■□□□□ 0.42
CLCN1-201ENST00000343257 PRPF40BQ6NWY9 871 aaKnown RBP17.69■□□□□ 0.42
CLCN1-201ENST00000343257 ARHGEF28Q8N1W1 1705 aaKnown RBP17.68■□□□□ 0.42
CLCN1-201ENST00000343257 IRX5P78411 483 aaPredicted RBP17.68■□□□□ 0.42
CLCN1-201ENST00000343257 LARP1BQ659C4 914 aaKnown RBP17.68■□□□□ 0.42
CLCN1-201ENST00000343257 TTC14Q96N46 770 aa17.68■□□□□ 0.42
CLCN1-201ENST00000343257 NUTM2FA1L443 756 aa17.68■□□□□ 0.42
CLCN1-201ENST00000343257 CCT4P50991 539 aaKnown RBP17.68■□□□□ 0.42
CLCN1-201ENST00000343257 ZNF75DP51815 510 aa17.68■□□□□ 0.42
CLCN1-201ENST00000343257 TERF2Q15554 542 aa17.68■□□□□ 0.42
CLCN1-201ENST00000343257 ELF2Q15723 593 aa17.68■□□□□ 0.42
CLCN1-201ENST00000343257 CDC37L1Q7L3B6 337 aa17.68■□□□□ 0.42
CLCN1-201ENST00000343257 PDRG1Q9NUG6 133 aa17.68■□□□□ 0.42
CLCN1-201ENST00000343257 PPLO60437 1756 aa17.68■□□□□ 0.42
CLCN1-201ENST00000343257 FILIP1Q7Z7B0 1213 aa17.67■□□□□ 0.42
CLCN1-201ENST00000343257 STAG3Q9UJ98 1225 aa17.67■□□□□ 0.42
CLCN1-201ENST00000343257 YEATS2Q9ULM3 1422 aa17.67■□□□□ 0.42
CLCN1-201ENST00000343257 COL9A3Q14050 684 aaPredicted RBP17.67■□□□□ 0.42
CLCN1-201ENST00000343257 CEBPZQ03701 1054 aaKnown RBP17.67■□□□□ 0.42
CLCN1-201ENST00000343257 GABPB1Q06547 395 aaPredicted RBP17.67■□□□□ 0.42
CLCN1-201ENST00000343257 STK3Q13188 491 aa17.67■□□□□ 0.42
CLCN1-201ENST00000343257 NEURL4Q96JN8 1562 aa17.67■□□□□ 0.42
CLCN1-201ENST00000343257 ATP8B2P98198 1209 aa17.66■□□□□ 0.42
CLCN1-201ENST00000343257 KRT222Q8N1A0 295 aa17.66■□□□□ 0.42
CLCN1-201ENST00000343257 SGSM2O43147 1006 aa17.66■□□□□ 0.42
CLCN1-201ENST00000343257 PTH1RQ03431 593 aa17.66■□□□□ 0.42
CLCN1-201ENST00000343257 ZNF165P49910 485 aa17.65■□□□□ 0.42
CLCN1-201ENST00000343257 FOSBP53539 338 aa17.65■□□□□ 0.42
CLCN1-201ENST00000343257 BICD2Q8TD16 824 aa17.65■□□□□ 0.42
CLCN1-201ENST00000343257 STK31Q9BXU1 1019 aa17.65■□□□□ 0.42
CLCN1-201ENST00000343257 LSG1Q9H089 658 aaKnown RBP17.65■□□□□ 0.42
CLCN1-201ENST00000343257 RAD50Q92878 1312 aa17.65■□□□□ 0.42
CLCN1-201ENST00000343257 HAP1P54257 671 aaPredicted RBP17.65■□□□□ 0.42
CLCN1-201ENST00000343257 EIF4A2Q14240 407 aaKnown RBP17.65■□□□□ 0.42
CLCN1-201ENST00000343257 ME3Q16798 604 aa17.65■□□□□ 0.42
CLCN1-201ENST00000343257 HYPKQ9NX55 129 aa17.65■□□□□ 0.42
CLCN1-201ENST00000343257 KRT85P78386 507 aa17.65■□□□□ 0.42
CLCN1-201ENST00000343257 TAF3Q5VWG9 929 aa17.65■□□□□ 0.42
CLCN1-201ENST00000343257 FBXO38Q6PIJ6 1188 aa17.65■□□□□ 0.42
CLCN1-201ENST00000343257 GTF3C6Q969F1 213 aa17.65■□□□□ 0.42
CLCN1-201ENST00000343257 MORC2Q9Y6X9 1032 aaPredicted RBP17.65■□□□□ 0.42
CLCN1-201ENST00000343257 KIAA0232Q92628 1395 aa17.64■□□□□ 0.41
CLCN1-201ENST00000343257 ST3GAL1Q11201 340 aa17.63■□□□□ 0.41
CLCN1-201ENST00000343257 USP16Q9Y5T5 823 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms