RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 DRC7Q8IY82 874 aa18.26■□□□□ 0.51
SNX18-202ENST00000343017 RASEFQ8IZ41 740 aa18.25■□□□□ 0.51
SNX18-202ENST00000343017 LRRCC1Q9C099 1032 aa18.25■□□□□ 0.51
SNX18-202ENST00000343017 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNX18-202ENST00000343017 V9GYY5 206 aaPredicted RBP18.25■□□□□ 0.51
SNX18-202ENST00000343017 TXNDC2Q86VQ3 553 aa18.25■□□□□ 0.51
SNX18-202ENST00000343017 ZNF592Q92610 1267 aa18.25■□□□□ 0.51
SNX18-202ENST00000343017 FAM173BQ6P4H8 233 aa18.25■□□□□ 0.51
SNX18-202ENST00000343017 RUFY3Q7L099 469 aa18.25■□□□□ 0.51
SNX18-202ENST00000343017 NUTM1Q86Y26 1132 aa18.24■□□□□ 0.51
SNX18-202ENST00000343017 CKAP2LQ8IYA6 745 aa18.24■□□□□ 0.51
SNX18-202ENST00000343017 FEZ1Q99689 392 aa18.24■□□□□ 0.51
SNX18-202ENST00000343017 SALL3Q9BXA9 1300 aa18.24■□□□□ 0.51
SNX18-202ENST00000343017 YTHDC2Q9H6S0 1430 aaKnown RBP18.24■□□□□ 0.51
SNX18-202ENST00000343017 LMOD3Q0VAK6 560 aa18.24■□□□□ 0.51
SNX18-202ENST00000343017 SMC3Q9UQE7 1217 aa18.24■□□□□ 0.51
SNX18-202ENST00000343017 TNNT1P13805 278 aa18.23■□□□□ 0.51
SNX18-202ENST00000343017 SLFN14P0C7P3 912 aa18.23■□□□□ 0.51
SNX18-202ENST00000343017 CCDC83Q8IWF9 413 aa18.23■□□□□ 0.51
SNX18-202ENST00000343017 NECTIN2Q92692 538 aa18.23■□□□□ 0.51
SNX18-202ENST00000343017 ZFYVE9O95405 1425 aa18.22■□□□□ 0.51
SNX18-202ENST00000343017 VPS37CA5D8V6 355 aaPredicted RBP18.22■□□□□ 0.51
SNX18-202ENST00000343017 HSPA4P34932 840 aa18.22■□□□□ 0.51
SNX18-202ENST00000343017 SNX14Q9Y5W7 946 aa18.22■□□□□ 0.51
SNX18-202ENST00000343017 GOLGA6L6A8MZA4 724 aa18.22■□□□□ 0.51
SNX18-202ENST00000343017 FERMT3Q86UX7 667 aa18.22■□□□□ 0.51
SNX18-202ENST00000343017 CCDC192P0DO97 292 aa18.21■□□□□ 0.51
SNX18-202ENST00000343017 GNAI2P04899 355 aa18.21■□□□□ 0.5
SNX18-202ENST00000343017 LIG1P18858 919 aa18.21■□□□□ 0.5
SNX18-202ENST00000343017 GJB2P29033 226 aa18.21■□□□□ 0.5
SNX18-202ENST00000343017 SULT6B1Q6IMI4 303 aa18.21■□□□□ 0.5
SNX18-202ENST00000343017 SPG7Q9UQ90 795 aa18.21■□□□□ 0.5
SNX18-202ENST00000343017 NCKAP5LQ9HCH0 1330 aa18.2■□□□□ 0.5
SNX18-202ENST00000343017 CHL1O00533 1208 aa18.2■□□□□ 0.5
SNX18-202ENST00000343017 DDX41Q9UJV9 622 aaKnown RBP18.2■□□□□ 0.5
SNX18-202ENST00000343017 KCNJ4P48050 445 aa18.2■□□□□ 0.5
SNX18-202ENST00000343017 MRVI1Q9Y6F6 885 aa18.2■□□□□ 0.5
SNX18-202ENST00000343017 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.19■□□□□ 0.5
SNX18-202ENST00000343017 ST7Q9NRC1 585 aa18.19■□□□□ 0.5
SNX18-202ENST00000343017 MTMR6Q9Y217 621 aa18.19■□□□□ 0.5
SNX18-202ENST00000343017 NEXMIFQ5QGS0 1516 aa18.19■□□□□ 0.5
SNX18-202ENST00000343017 ERICH4A6NGS2 130 aa18.19■□□□□ 0.5
SNX18-202ENST00000343017 TTC14Q96N46 770 aa18.19■□□□□ 0.5
SNX18-202ENST00000343017 TRIM5Q9C035 493 aa18.19■□□□□ 0.5
SNX18-202ENST00000343017 LIMCH1Q9UPQ0 1083 aa18.19■□□□□ 0.5
SNX18-202ENST00000343017 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
SNX18-202ENST00000343017 KIAA0232Q92628 1395 aa18.19■□□□□ 0.5
SNX18-202ENST00000343017 PTPRCP08575 1304 aa18.19■□□□□ 0.5
SNX18-202ENST00000343017 NPHP1O15259 732 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 TPM3P06753 285 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 TPD52L1Q16890 204 aaPredicted RBP18.18■□□□□ 0.5
SNX18-202ENST00000343017 NECAB1Q8N987 351 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 SMTNL1A8MU46 457 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 PDE4CQ08493 712 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 ARID5BQ14865 1188 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 CCDC112Q8NEF3 446 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 PIK3C2BO00750 1634 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 CDC42BPGQ6DT37 1551 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 DLG5Q8TDM6 1919 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 TYRO3Q06418 890 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 ANO6Q4KMQ2 910 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 ZSCAN25Q6NSZ9 544 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 FAM200AQ8TCP9 573 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 SLC26A8Q96RN1 970 aa18.18■□□□□ 0.5
SNX18-202ENST00000343017 CASTP20810 708 aaKnown RBP18.17■□□□□ 0.5
SNX18-202ENST00000343017 TTC6Q86TZ1 520 aa18.17■□□□□ 0.5
SNX18-202ENST00000343017 KIF18AQ8NI77 898 aa18.17■□□□□ 0.5
SNX18-202ENST00000343017 CBX8Q9HC52 389 aa18.17■□□□□ 0.5
SNX18-202ENST00000343017 CACTINQ8WUQ7 758 aaKnown RBP18.17■□□□□ 0.5
SNX18-202ENST00000343017 USP27XA6NNY8 438 aa18.16■□□□□ 0.5
SNX18-202ENST00000343017 CWC27Q6UX04 472 aaKnown RBP18.16■□□□□ 0.5
SNX18-202ENST00000343017 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.16■□□□□ 0.5
SNX18-202ENST00000343017 ANKRD26Q9UPS8 1709 aa18.16■□□□□ 0.5
SNX18-202ENST00000343017 FOXO3O43524 673 aa18.16■□□□□ 0.5
SNX18-202ENST00000343017 CCDC144BQ3MJ40 725 aa18.16■□□□□ 0.5
SNX18-202ENST00000343017 CCDC144CPQ8IYA2 1237 aa18.16■□□□□ 0.5
SNX18-202ENST00000343017 TFIP11Q9UBB9 837 aaKnown RBP18.16■□□□□ 0.5
SNX18-202ENST00000343017 MYO5BQ9ULV0 1848 aa18.16■□□□□ 0.5
SNX18-202ENST00000343017 PTPRMP28827 1452 aa18.16■□□□□ 0.5
SNX18-202ENST00000343017 RTF1Q92541 710 aaKnown RBP18.16■□□□□ 0.5
SNX18-202ENST00000343017 LRRFIP2Q9Y608 721 aaKnown RBP18.16■□□□□ 0.5
SNX18-202ENST00000343017 TERF2Q15554 542 aa18.15■□□□□ 0.5
SNX18-202ENST00000343017 MAP3K11Q16584 847 aa18.15■□□□□ 0.5
SNX18-202ENST00000343017 KMT5BQ4FZB7 885 aa18.15■□□□□ 0.5
SNX18-202ENST00000343017 ATP6V1DQ9Y5K8 247 aa18.15■□□□□ 0.5
SNX18-202ENST00000343017 COL9A3Q14050 684 aaPredicted RBP18.15■□□□□ 0.5
SNX18-202ENST00000343017 ADCK5Q3MIX3 580 aa18.15■□□□□ 0.5
SNX18-202ENST00000343017 TRERF1Q96PN7 1200 aa18.15■□□□□ 0.5
SNX18-202ENST00000343017 MORC2Q9Y6X9 1032 aaPredicted RBP18.15■□□□□ 0.5
SNX18-202ENST00000343017 GABPB1Q06547 395 aaPredicted RBP18.14■□□□□ 0.5
SNX18-202ENST00000343017 NUP62CLQ9H1M0 184 aa18.14■□□□□ 0.5
SNX18-202ENST00000343017 DACT1Q9NYF0 836 aa18.14■□□□□ 0.5
SNX18-202ENST00000343017 ZNF215Q9UL58 517 aaPredicted RBP18.14■□□□□ 0.5
SNX18-202ENST00000343017 NAP1L2Q9ULW6 460 aaPredicted RBP18.14■□□□□ 0.5
SNX18-202ENST00000343017 CLTCQ00610 1675 aaKnown RBP18.14■□□□□ 0.49
SNX18-202ENST00000343017 IRX5P78411 483 aaPredicted RBP18.14■□□□□ 0.49
SNX18-202ENST00000343017 SOX12O15370 315 aa18.14■□□□□ 0.49
SNX18-202ENST00000343017 STAP2Q9UGK3 403 aa18.14■□□□□ 0.49
SNX18-202ENST00000343017 CCT4P50991 539 aaKnown RBP18.13■□□□□ 0.49
SNX18-202ENST00000343017 ZNF75DP51815 510 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms