RNA–Protein interactions for RNA: ENST00000342751.8

SDHC-201, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 1,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-201ENST00000342751 SIPA1L3O60292 1781 aaPredicted RBP27.09■■□□□ 1.93
SDHC-201ENST00000342751 ATP10DQ9P241 1426 aa27.09■■□□□ 1.93
SDHC-201ENST00000342751 DPEP1P16444 411 aa27.09■■□□□ 1.93
SDHC-201ENST00000342751 ZNF790Q6PG37 636 aa27.09■■□□□ 1.93
SDHC-201ENST00000342751 VSIG10Q8N0Z9 540 aa27.09■■□□□ 1.93
SDHC-201ENST00000342751 ZNF330Q9Y3S2 320 aaPredicted RBP27.09■■□□□ 1.93
SDHC-201ENST00000342751 TGFB2P61812 414 aa27.08■■□□□ 1.93
SDHC-201ENST00000342751 STARD3NLO95772 234 aa27.07■■□□□ 1.92
SDHC-201ENST00000342751 MCM10Q7L590 875 aa27.07■■□□□ 1.92
SDHC-201ENST00000342751 HEG1Q9ULI3 1381 aa27.07■■□□□ 1.92
SDHC-201ENST00000342751 SENP3-EIF4A1A0A087X0R7 540 aa27.06■■□□□ 1.92
SDHC-201ENST00000342751 BTBD11A6QL63 1104 aa27.06■■□□□ 1.92
SDHC-201ENST00000342751 ZNF526Q8TF50 670 aaPredicted RBP27.06■■□□□ 1.92
SDHC-201ENST00000342751 RTF1Q92541 710 aaKnown RBP27.06■■□□□ 1.92
SDHC-201ENST00000342751 KCNQ3O43525 872 aa27.05■■□□□ 1.92
SDHC-201ENST00000342751 CEMIPQ8WUJ3 1361 aa27.05■■□□□ 1.92
SDHC-201ENST00000342751 FCHSD2O94868 740 aa27.04■■□□□ 1.92
SDHC-201ENST00000342751 DCTN1Q14203 1278 aa27.04■■□□□ 1.92
SDHC-201ENST00000342751 FMNL2Q96PY5 1086 aa27.04■■□□□ 1.92
SDHC-201ENST00000342751 NARFQ9UHQ1 456 aa27.04■■□□□ 1.92
SDHC-201ENST00000342751 ADCY9O60503 1353 aa27.04■■□□□ 1.92
SDHC-201ENST00000342751 POLRMTO00411 1230 aaKnown RBP27.03■■□□□ 1.92
SDHC-201ENST00000342751 NFIXQ14938 502 aa27.01■■□□□ 1.91
SDHC-201ENST00000342751 BICDL1Q6ZP65 573 aa27.01■■□□□ 1.91
SDHC-201ENST00000342751 TM4SF1P30408 202 aa27■■□□□ 1.91
SDHC-201ENST00000342751 NEFMP07197 916 aa26.99■■□□□ 1.91
SDHC-201ENST00000342751 CHRNA5P30532 468 aa26.99■■□□□ 1.91
SDHC-201ENST00000342751 ARHGAP27Q6ZUM4 889 aa26.99■■□□□ 1.91
SDHC-201ENST00000342751 TEX13AQ9BXU3 409 aaPredicted RBP26.99■■□□□ 1.91
SDHC-201ENST00000342751 BCL2L12Q9HB09 334 aa26.99■■□□□ 1.91
SDHC-201ENST00000342751 GPBP1L1Q9HC44 474 aaPredicted RBP26.99■■□□□ 1.91
SDHC-201ENST00000342751 BRCA1P38398 1863 aaKnown RBP26.98■■□□□ 1.91
SDHC-201ENST00000342751 A0A087WZG4 1122 aa26.97■■□□□ 1.91
SDHC-201ENST00000342751 A1BGP04217 495 aa26.97■■□□□ 1.91
SDHC-201ENST00000342751 EIF5P55010 431 aaKnown RBP26.97■■□□□ 1.91
SDHC-201ENST00000342751 TBC1D2BQ9UPU7 963 aa26.97■■□□□ 1.91
SDHC-201ENST00000342751 KCNA3P22001 575 aa26.96■■□□□ 1.91
SDHC-201ENST00000342751 PIP4K2AP48426 406 aaPredicted RBP26.96■■□□□ 1.91
SDHC-201ENST00000342751 NPM2Q86SE8 214 aaKnown RBP26.96■■□□□ 1.91
SDHC-201ENST00000342751 PIM2Q9P1W9 311 aa26.96■■□□□ 1.91
SDHC-201ENST00000342751 AFDNP55196 1824 aaKnown RBP26.95■■□□□ 1.91
SDHC-201ENST00000342751 PRAMEF22A3QJZ6 481 aa26.95■■□□□ 1.9
SDHC-201ENST00000342751 SERPINB2P05120 415 aa26.95■■□□□ 1.9
SDHC-201ENST00000342751 DDX10Q13206 875 aaKnown RBP26.95■■□□□ 1.9
SDHC-201ENST00000342751 DALRD3Q5D0E6 543 aaKnown RBP26.94■■□□□ 1.9
SDHC-201ENST00000342751 SCN7AQ01118 1682 aa26.92■■□□□ 1.9
SDHC-201ENST00000342751 MIS18AQ9NYP9 233 aa26.92■■□□□ 1.9
SDHC-201ENST00000342751 ARFGEF1Q9Y6D6 1849 aa26.91■■□□□ 1.9
SDHC-201ENST00000342751 IL6STP40189 918 aaPredicted RBP26.91■■□□□ 1.9
SDHC-201ENST00000342751 TBC1D9BQ66K14 1250 aa26.91■■□□□ 1.9
SDHC-201ENST00000342751 USP16Q9Y5T5 823 aa26.91■■□□□ 1.9
SDHC-201ENST00000342751 MAPK8IP3Q9UPT6 1336 aa26.9■■□□□ 1.9
SDHC-201ENST00000342751 CARMIL3Q8ND23 1372 aa26.9■■□□□ 1.9
SDHC-201ENST00000342751 HTATSF1O43719 755 aaKnown RBP26.9■■□□□ 1.9
SDHC-201ENST00000342751 DLG5Q8TDM6 1919 aa26.9■■□□□ 1.9
SDHC-201ENST00000342751 SNRPA1P09661 255 aaKnown RBP26.89■■□□□ 1.9
SDHC-201ENST00000342751 CCDC24Q8N4L8 307 aa26.89■■□□□ 1.9
SDHC-201ENST00000342751 NRXN2Q9P2S2 1712 aa26.88■■□□□ 1.89
SDHC-201ENST00000342751 THUMPD2Q9BTF0 503 aaKnown RBP26.88■■□□□ 1.89
SDHC-201ENST00000342751 TAF7Q15545 349 aaPredicted RBP26.87■■□□□ 1.89
SDHC-201ENST00000342751 NFE2L2Q16236 605 aa26.87■■□□□ 1.89
SDHC-201ENST00000342751 DZIP3Q86Y13 1208 aaKnown RBP26.87■■□□□ 1.89
SDHC-201ENST00000342751 PLEKHF1Q96S99 279 aa26.87■■□□□ 1.89
SDHC-201ENST00000342751 NPHP1O15259 732 aa26.86■■□□□ 1.89
SDHC-201ENST00000342751 RALBP1Q15311 655 aa26.86■■□□□ 1.89
SDHC-201ENST00000342751 C2CD5Q86YS7 1000 aa26.86■■□□□ 1.89
SDHC-201ENST00000342751 CAMTA2O94983 1202 aa26.85■■□□□ 1.89
SDHC-201ENST00000342751 C9orf131Q5VYM1 1079 aa26.84■■□□□ 1.89
SDHC-201ENST00000342751 PNNQ9H307 717 aaKnown RBP26.83■■□□□ 1.89
SDHC-201ENST00000342751 BCORQ6W2J9 1755 aa26.83■■□□□ 1.89
SDHC-201ENST00000342751 H0YIN7 160 aa26.81■■□□□ 1.88
SDHC-201ENST00000342751 SETDB2Q96T68 719 aa26.81■■□□□ 1.88
SDHC-201ENST00000342751 PRR5LQ6MZQ0 368 aa26.8■■□□□ 1.88
SDHC-201ENST00000342751 RNF181Q9P0P0 153 aa26.8■■□□□ 1.88
SDHC-201ENST00000342751 KDM3BQ7LBC6 1761 aa26.79■■□□□ 1.88
SDHC-201ENST00000342751 DLEC1Q9Y238 1755 aa26.79■■□□□ 1.88
SDHC-201ENST00000342751 NBPF26B4DH59 902 aa26.79■■□□□ 1.88
SDHC-201ENST00000342751 KIF3CO14782 793 aa26.79■■□□□ 1.88
SDHC-201ENST00000342751 RASSF7Q02833 373 aa26.79■■□□□ 1.88
SDHC-201ENST00000342751 NBPF10Q6P3W6 841 aaKnown RBP26.79■■□□□ 1.88
SDHC-201ENST00000342751 NGEFQ8N5V2 710 aa26.79■■□□□ 1.88
SDHC-201ENST00000342751 NBPF15Q8N660 670 aa26.79■■□□□ 1.88
SDHC-201ENST00000342751 CNBD1Q8NA66 436 aa26.79■■□□□ 1.88
SDHC-201ENST00000342751 PNISRQ8TF01 805 aaKnown RBP26.79■■□□□ 1.88
SDHC-201ENST00000342751 ZNF622Q969S3 477 aaKnown RBP eCLIP26.79■■□□□ 1.88
SDHC-201ENST00000342751 MYBBP1AQ9BQG0 1328 aaKnown RBP26.79■■□□□ 1.88
SDHC-201ENST00000342751 LAMB4A4D0S4 1761 aa26.79■■□□□ 1.88
SDHC-201ENST00000342751 ANKRD31Q8N7Z5 1873 aa26.79■■□□□ 1.88
SDHC-201ENST00000342751 TTLL6Q8N841 843 aa26.78■■□□□ 1.88
SDHC-201ENST00000342751 ZNF219Q9P2Y4 722 aaPredicted RBP26.78■■□□□ 1.88
SDHC-201ENST00000342751 CCDC146Q8IYE0 955 aa26.77■■□□□ 1.88
SDHC-201ENST00000342751 ST5P78524 1137 aa26.76■■□□□ 1.87
SDHC-201ENST00000342751 ZNF652Q9Y2D9 606 aa26.76■■□□□ 1.87
SDHC-201ENST00000342751 FAM177BA6PVY3 158 aa26.75■■□□□ 1.87
SDHC-201ENST00000342751 PDE6BP35913 854 aa26.75■■□□□ 1.87
SDHC-201ENST00000342751 RIPK4P57078 832 aa26.75■■□□□ 1.87
SDHC-201ENST00000342751 BRIP1Q9BX63 1249 aa26.75■■□□□ 1.87
SDHC-201ENST00000342751 RRP7AQ9Y3A4 280 aaKnown RBP26.75■■□□□ 1.87
SDHC-201ENST00000342751 COL11A2P13942 1736 aaPredicted RBP26.75■■□□□ 1.87
SDHC-201ENST00000342751 EIF4A1P60842 406 aaKnown RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms