RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 FHOD1Q9Y613 1164 aa21.95■■□□□ 1.1
SMPD1-201ENST00000342245 PTPRCP08575 1304 aa21.95■■□□□ 1.1
SMPD1-201ENST00000342245 ANKRD26Q9UPS8 1709 aa21.94■■□□□ 1.1
SMPD1-201ENST00000342245 CLGNO14967 610 aa21.94■■□□□ 1.1
SMPD1-201ENST00000342245 GOLGA6L1Q8N7Z2 621 aa21.94■■□□□ 1.1
SMPD1-201ENST00000342245 CACTINQ8WUQ7 758 aaKnown RBP21.94■■□□□ 1.1
SMPD1-201ENST00000342245 DIAPH1O60610 1272 aaKnown RBP21.94■■□□□ 1.1
SMPD1-201ENST00000342245 GTF2A1P52655 376 aaPredicted RBP21.94■■□□□ 1.1
SMPD1-201ENST00000342245 PDE1AP54750 535 aa21.94■■□□□ 1.1
SMPD1-201ENST00000342245 SYT1P21579 422 aa21.93■■□□□ 1.1
SMPD1-201ENST00000342245 CASQ1P31415 396 aa21.93■■□□□ 1.1
SMPD1-201ENST00000342245 NOL8Q76FK4 1167 aaKnown RBP21.93■■□□□ 1.1
SMPD1-201ENST00000342245 PALD1Q9ULE6 856 aa21.93■■□□□ 1.1
SMPD1-201ENST00000342245 ARHGEF40Q8TER5 1519 aa21.93■■□□□ 1.1
SMPD1-201ENST00000342245 CHGAP10645 457 aaKnown RBP21.92■■□□□ 1.1
SMPD1-201ENST00000342245 CBX8Q9HC52 389 aa21.92■■□□□ 1.1
SMPD1-201ENST00000342245 PSEN1P49768 467 aa21.92■■□□□ 1.1
SMPD1-201ENST00000342245 ICE2Q659A1 982 aa21.92■■□□□ 1.1
SMPD1-201ENST00000342245 LRRC8AQ8IWT6 810 aa21.92■■□□□ 1.1
SMPD1-201ENST00000342245 SOX12O15370 315 aa21.91■■□□□ 1.1
SMPD1-201ENST00000342245 HAP1P54257 671 aaPredicted RBP21.91■■□□□ 1.1
SMPD1-201ENST00000342245 FILIP1Q7Z7B0 1213 aa21.91■■□□□ 1.1
SMPD1-201ENST00000342245 LUZP1Q86V48 1076 aa21.91■■□□□ 1.1
SMPD1-201ENST00000342245 NRBP1Q9UHY1 535 aa21.91■■□□□ 1.1
SMPD1-201ENST00000342245 SMC3Q9UQE7 1217 aa21.91■■□□□ 1.1
SMPD1-201ENST00000342245 KIDINS220Q9ULH0 1771 aa21.91■■□□□ 1.1
SMPD1-201ENST00000342245 PNMA6AP0CW24 399 aaPredicted RBP21.91■■□□□ 1.1
SMPD1-201ENST00000342245 ANO2Q9NQ90 1003 aa21.91■■□□□ 1.1
SMPD1-201ENST00000342245 EVC2Q86UK5 1308 aa21.91■■□□□ 1.1
SMPD1-201ENST00000342245 EFCAB6Q5THR3 1501 aa21.91■■□□□ 1.1
SMPD1-201ENST00000342245 TWISTNBQ3B726 338 aaPredicted RBP21.9■■□□□ 1.1
SMPD1-201ENST00000342245 L2HGDHQ9H9P8 463 aa21.9■■□□□ 1.1
SMPD1-201ENST00000342245 PNPLA6Q8IY17 1366 aa21.9■■□□□ 1.1
SMPD1-201ENST00000342245 ERBB3P21860 1342 aa21.9■■□□□ 1.1
SMPD1-201ENST00000342245 TUBGCP6Q96RT7 1819 aa21.9■■□□□ 1.1
SMPD1-201ENST00000342245 SARM1Q6SZW1 724 aa21.89■■□□□ 1.1
SMPD1-201ENST00000342245 MROH2AA6NES4 1674 aa21.89■■□□□ 1.1
SMPD1-201ENST00000342245 PLA2G4AP47712 749 aa21.89■■□□□ 1.09
SMPD1-201ENST00000342245 NOM1Q5C9Z4 860 aaKnown RBP21.89■■□□□ 1.09
SMPD1-201ENST00000342245 MRFAP1L1Q96HT8 127 aa21.89■■□□□ 1.09
SMPD1-201ENST00000342245 SLC26A8Q96RN1 970 aa21.89■■□□□ 1.09
SMPD1-201ENST00000342245 MYCBPQ99417 103 aaPredicted RBP21.89■■□□□ 1.09
SMPD1-201ENST00000342245 DDX19AQ9NUU7 478 aaKnown RBP21.89■■□□□ 1.09
SMPD1-201ENST00000342245 GLI2P10070 1586 aa21.89■■□□□ 1.09
SMPD1-201ENST00000342245 MYO1CO00159 1063 aa21.88■■□□□ 1.09
SMPD1-201ENST00000342245 ZNF853P0CG23 659 aa21.88■■□□□ 1.09
SMPD1-201ENST00000342245 SYT10Q6XYQ8 523 aa21.88■■□□□ 1.09
SMPD1-201ENST00000342245 KRBA2Q6ZNG9 492 aa21.88■■□□□ 1.09
SMPD1-201ENST00000342245 GTF3C6Q969F1 213 aa21.88■■□□□ 1.09
SMPD1-201ENST00000342245 POLKQ9UBT6 870 aa21.88■■□□□ 1.09
SMPD1-201ENST00000342245 LRRC7Q96NW7 1537 aa21.88■■□□□ 1.09
SMPD1-201ENST00000342245 ANO6Q4KMQ2 910 aa21.88■■□□□ 1.09
SMPD1-201ENST00000342245 TMCO3Q6UWJ1 677 aa21.88■■□□□ 1.09
SMPD1-201ENST00000342245 RBM43Q6ZSC3 357 aaKnown RBP21.88■■□□□ 1.09
SMPD1-201ENST00000342245 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.88■■□□□ 1.09
SMPD1-201ENST00000342245 LIMCH1Q9UPQ0 1083 aa21.88■■□□□ 1.09
SMPD1-201ENST00000342245 TPM1P09493 284 aa21.87■■□□□ 1.09
SMPD1-201ENST00000342245 CHMLP26374 656 aa21.87■■□□□ 1.09
SMPD1-201ENST00000342245 CLCN6P51797 869 aa21.87■■□□□ 1.09
SMPD1-201ENST00000342245 SRPK2P78362 688 aaKnown RBP21.87■■□□□ 1.09
SMPD1-201ENST00000342245 NFE2L2Q16236 605 aa21.87■■□□□ 1.09
SMPD1-201ENST00000342245 TSPYL6Q8N831 410 aa21.87■■□□□ 1.09
SMPD1-201ENST00000342245 NCAPGQ9BPX3 1015 aa21.87■■□□□ 1.09
SMPD1-201ENST00000342245 TNMDQ9H2S6 317 aa21.87■■□□□ 1.09
SMPD1-201ENST00000342245 HDAC5Q9UQL6 1122 aa21.87■■□□□ 1.09
SMPD1-201ENST00000342245 HSPA4P34932 840 aa21.87■■□□□ 1.09
SMPD1-201ENST00000342245 ZFYVE9O95405 1425 aa21.87■■□□□ 1.09
SMPD1-201ENST00000342245 ZRANB2O95218 330 aaKnown RBP eCLIP21.86■■□□□ 1.09
SMPD1-201ENST00000342245 CCAR2Q8N163 923 aaKnown RBP21.86■■□□□ 1.09
SMPD1-201ENST00000342245 AK7Q96M32 723 aa21.86■■□□□ 1.09
SMPD1-201ENST00000342245 UPF3BQ9BZI7 483 aaKnown RBP21.86■■□□□ 1.09
SMPD1-201ENST00000342245 LRRFIP2Q9Y608 721 aaKnown RBP21.86■■□□□ 1.09
SMPD1-201ENST00000342245 SKILP12757 684 aa21.86■■□□□ 1.09
SMPD1-201ENST00000342245 DNM1Q05193 864 aaKnown RBP21.86■■□□□ 1.09
SMPD1-201ENST00000342245 GGT6Q6P531 493 aa21.86■■□□□ 1.09
SMPD1-201ENST00000342245 NFATC2IPQ8NCF5 419 aa21.86■■□□□ 1.09
SMPD1-201ENST00000342245 GOLGA5Q8TBA6 731 aa21.86■■□□□ 1.09
SMPD1-201ENST00000342245 PSD3Q9NYI0 1048 aa21.86■■□□□ 1.09
SMPD1-201ENST00000342245 AATKQ6ZMQ8 1374 aa21.85■■□□□ 1.09
SMPD1-201ENST00000342245 DHX8Q14562 1220 aaKnown RBP21.85■■□□□ 1.09
SMPD1-201ENST00000342245 ZSCAN26Q16670 478 aa21.85■■□□□ 1.09
SMPD1-201ENST00000342245 ADGRB1O14514 1584 aa21.85■■□□□ 1.09
SMPD1-201ENST00000342245 GUCY2CP25092 1073 aa21.85■■□□□ 1.09
SMPD1-201ENST00000342245 LMOD3Q0VAK6 560 aa21.85■■□□□ 1.09
SMPD1-201ENST00000342245 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.84■■□□□ 1.09
SMPD1-201ENST00000342245 KRT85P78386 507 aa21.84■■□□□ 1.09
SMPD1-201ENST00000342245 IQUBQ8NA54 791 aa21.84■■□□□ 1.09
SMPD1-201ENST00000342245 NEK11Q8NG66 645 aa21.84■■□□□ 1.09
SMPD1-201ENST00000342245 UBXN6Q9BZV1 441 aa21.84■■□□□ 1.09
SMPD1-201ENST00000342245 MBIPQ9NS73 344 aa21.84■■□□□ 1.09
SMPD1-201ENST00000342245 ATG3Q9NT62 314 aa21.84■■□□□ 1.09
SMPD1-201ENST00000342245 TRAK1Q9UPV9 953 aa21.84■■□□□ 1.09
SMPD1-201ENST00000342245 CCDC144BQ3MJ40 725 aa21.83■■□□□ 1.09
SMPD1-201ENST00000342245 CCDC144CPQ8IYA2 1237 aa21.83■■□□□ 1.09
SMPD1-201ENST00000342245 CCDC191Q8NCU4 936 aa21.83■■□□□ 1.09
SMPD1-201ENST00000342245 MTMR6Q9Y217 621 aa21.83■■□□□ 1.09
SMPD1-201ENST00000342245 KIAA0232Q92628 1395 aa21.83■■□□□ 1.09
SMPD1-201ENST00000342245 ZNF165P49910 485 aa21.83■■□□□ 1.08
SMPD1-201ENST00000342245 TPRNQ4KMQ1 711 aa21.83■■□□□ 1.08
SMPD1-201ENST00000342245 FBXO18Q8NFZ0 1043 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms