RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 ZNF445P59923 1031 aa8.87□□□□□ -0.99
PTPRR-202ENST00000342084 GDPD2Q9HCC8 539 aa8.87□□□□□ -0.99
PTPRR-202ENST00000342084 TMEM63CQ9P1W3 806 aa8.87□□□□□ -0.99
PTPRR-202ENST00000342084 CHPF2Q9P2E5 772 aa8.87□□□□□ -0.99
PTPRR-202ENST00000342084 SOS1Q07889 1333 aaPredicted RBP8.86□□□□□ -0.99
PTPRR-202ENST00000342084 SYCE3A1L190 88 aa8.86□□□□□ -0.99
PTPRR-202ENST00000342084 HTATSF1O43719 755 aaKnown RBP8.86□□□□□ -0.99
PTPRR-202ENST00000342084 NBPF7P0C2Y1 421 aaPredicted RBP8.86□□□□□ -0.99
PTPRR-202ENST00000342084 CCDC173Q0VFZ6 552 aa8.86□□□□□ -0.99
PTPRR-202ENST00000342084 LRRC59Q96AG4 307 aaKnown RBP8.86□□□□□ -0.99
PTPRR-202ENST00000342084 SRGAP3O43295 1099 aa8.85□□□□□ -0.99
PTPRR-202ENST00000342084 MCCP23508 829 aa8.85□□□□□ -0.99
PTPRR-202ENST00000342084 NBPF6Q5VWK0 638 aa8.85□□□□□ -0.99
PTPRR-202ENST00000342084 PIAS4Q8N2W9 510 aaPredicted RBP8.85□□□□□ -0.99
PTPRR-202ENST00000342084 NBPF4Q96M43 638 aa8.85□□□□□ -0.99
PTPRR-202ENST00000342084 PPP1R9BQ96SB3 815 aa8.85□□□□□ -0.99
PTPRR-202ENST00000342084 STAP2Q9UGK3 403 aa8.85□□□□□ -0.99
PTPRR-202ENST00000342084 USP54Q70EL1 1684 aa8.85□□□□□ -0.99
PTPRR-202ENST00000342084 ZNF142P52746 1687 aaPredicted RBP8.85□□□□□ -0.99
PTPRR-202ENST00000342084 RNF214Q8ND24 703 aa8.85□□□□□ -0.99
PTPRR-202ENST00000342084 PI4K2BQ8TCG2 481 aa8.85□□□□□ -0.99
PTPRR-202ENST00000342084 SRCIN1Q9C0H9 1055 aa8.85□□□□□ -0.99
PTPRR-202ENST00000342084 PI4KAP2A4QPH2 592 aa8.84□□□□□ -0.99
PTPRR-202ENST00000342084 CPA1P15085 419 aa8.84□□□□□ -0.99
PTPRR-202ENST00000342084 XPCQ01831 940 aaPredicted RBP8.84□□□□□ -0.99
PTPRR-202ENST00000342084 CUL4AQ13619 759 aa8.84□□□□□ -0.99
PTPRR-202ENST00000342084 MPRIPQ6WCQ1 1025 aa8.84□□□□□ -0.99
PTPRR-202ENST00000342084 PI4KAP1Q8N8J0 262 aa8.84□□□□□ -0.99
PTPRR-202ENST00000342084 RHPN1Q8TCX5 695 aa8.84□□□□□ -0.99
PTPRR-202ENST00000342084 SSH3Q8TE77 659 aa8.84□□□□□ -0.99
PTPRR-202ENST00000342084 SETD1BQ9UPS6 1966 aaKnown RBP8.84□□□□□ -0.99
PTPRR-202ENST00000342084 GADD45BO75293 160 aaPredicted RBP8.83□□□□□ -1
PTPRR-202ENST00000342084 BRD1O95696 1058 aa8.83□□□□□ -1
PTPRR-202ENST00000342084 EIF4A1P60842 406 aaKnown RBP8.83□□□□□ -1
PTPRR-202ENST00000342084 ANKARQ7Z5J8 1434 aa8.83□□□□□ -1
PTPRR-202ENST00000342084 LTN1O94822 1766 aa8.83□□□□□ -1
PTPRR-202ENST00000342084 N4BP2Q86UW6 1770 aaPredicted RBP8.83□□□□□ -1
PTPRR-202ENST00000342084 PXDNLA1KZ92 1463 aa8.83□□□□□ -1
PTPRR-202ENST00000342084 PRAMEF22A3QJZ6 481 aa8.83□□□□□ -1
PTPRR-202ENST00000342084 POLA2Q14181 598 aa8.83□□□□□ -1
PTPRR-202ENST00000342084 BEND3Q5T5X7 828 aa8.83□□□□□ -1
PTPRR-202ENST00000342084 THEMISQ8N1K5 641 aaPredicted RBP8.83□□□□□ -1
PTPRR-202ENST00000342084 DDX54Q8TDD1 881 aaKnown RBP8.83□□□□□ -1
PTPRR-202ENST00000342084 ANP32BQ92688 251 aaKnown RBP8.83□□□□□ -1
PTPRR-202ENST00000342084 SPG7Q9UQ90 795 aa8.83□□□□□ -1
PTPRR-202ENST00000342084 RGPD2P0DJD1 1756 aa8.82□□□□□ -1
PTPRR-202ENST00000342084 PROSER3Q2NL68 480 aa8.82□□□□□ -1
PTPRR-202ENST00000342084 CWC27Q6UX04 472 aaKnown RBP8.82□□□□□ -1
PTPRR-202ENST00000342084 RASEFQ8IZ41 740 aa8.82□□□□□ -1
PTPRR-202ENST00000342084 DNAAF4Q8WXU2 420 aa8.82□□□□□ -1
PTPRR-202ENST00000342084 PHF8Q9UPP1 1060 aa8.82□□□□□ -1
PTPRR-202ENST00000342084 PA2G4Q9UQ80 394 aaKnown RBP8.82□□□□□ -1
PTPRR-202ENST00000342084 PXDNQ92626 1479 aa8.82□□□□□ -1
PTPRR-202ENST00000342084 ADCY9O60503 1353 aa8.82□□□□□ -1
PTPRR-202ENST00000342084 CEMIPQ8WUJ3 1361 aa8.82□□□□□ -1
PTPRR-202ENST00000342084 RPAP1Q9BWH6 1393 aaPredicted RBP8.82□□□□□ -1
PTPRR-202ENST00000342084 HSPA4P34932 840 aa8.81□□□□□ -1
PTPRR-202ENST00000342084 ANAPC15P60006 121 aa8.81□□□□□ -1
PTPRR-202ENST00000342084 OS9Q13438 667 aaPredicted RBP8.81□□□□□ -1
PTPRR-202ENST00000342084 ZNF530Q6P9A1 599 aaPredicted RBP8.81□□□□□ -1
PTPRR-202ENST00000342084 LRSAM1Q6UWE0 723 aa8.81□□□□□ -1
PTPRR-202ENST00000342084 ZSCAN30Q86W11 494 aa8.81□□□□□ -1
PTPRR-202ENST00000342084 SNX14Q9Y5W7 946 aa8.81□□□□□ -1
PTPRR-202ENST00000342084 BTBD11A6QL63 1104 aa8.81□□□□□ -1
PTPRR-202ENST00000342084 SGSM2O43147 1006 aa8.81□□□□□ -1
PTPRR-202ENST00000342084 LARGE1O95461 756 aa8.81□□□□□ -1
PTPRR-202ENST00000342084 MCM2P49736 904 aa8.81□□□□□ -1
PTPRR-202ENST00000342084 CWF19L2Q2TBE0 894 aaKnown RBP8.81□□□□□ -1
PTPRR-202ENST00000342084 ESCO1Q5FWF5 840 aa8.81□□□□□ -1
PTPRR-202ENST00000342084 IP6K1Q92551 441 aa8.81□□□□□ -1
PTPRR-202ENST00000342084 LSG1Q9H089 658 aaKnown RBP8.81□□□□□ -1
PTPRR-202ENST00000342084 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.81□□□□□ -1
PTPRR-202ENST00000342084 ADAMTSL3P82987 1691 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 AOX1Q06278 1338 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 RAD50Q92878 1312 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 RAB11FIP3O75154 756 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 AK2P54819 239 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 TEFQ10587 303 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 USP48Q86UV5 1035 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 KIF1BPQ96EK5 621 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.8□□□□□ -1
PTPRR-202ENST00000342084 NFAT5O94916 1531 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 CHD2O14647 1828 aaKnown RBP8.8□□□□□ -1
PTPRR-202ENST00000342084 MED1Q15648 1581 aaPredicted RBP8.8□□□□□ -1
PTPRR-202ENST00000342084 KDM3BQ7LBC6 1761 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 MSNP26038 577 aaKnown RBP8.8□□□□□ -1
PTPRR-202ENST00000342084 LMOD2Q6P5Q4 547 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 RUFY3Q7L099 469 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 MPNDQ8N594 471 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 MAP3K2Q9Y2U5 619 aa8.8□□□□□ -1
PTPRR-202ENST00000342084 PTH1RQ03431 593 aa8.79□□□□□ -1
PTPRR-202ENST00000342084 PSME1Q06323 249 aa8.79□□□□□ -1
PTPRR-202ENST00000342084 COL9A3Q14050 684 aaPredicted RBP8.79□□□□□ -1
PTPRR-202ENST00000342084 CNTROBQ8N137 903 aa8.79□□□□□ -1
PTPRR-202ENST00000342084 INTS4Q96HW7 963 aaKnown RBP8.79□□□□□ -1
PTPRR-202ENST00000342084 TTC14Q96N46 770 aa8.79□□□□□ -1
PTPRR-202ENST00000342084 BABAM1Q9NWV8 329 aa8.79□□□□□ -1
PTPRR-202ENST00000342084 CNPY2Q9Y2B0 182 aa8.79□□□□□ -1
PTPRR-202ENST00000342084 MBD3O95983 291 aa8.78□□□□□ -1
PTPRR-202ENST00000342084 CASTP20810 708 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms