RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 KLHDC4Q8TBB5 520 aa14.21□□□□□ -0.13
CDH5-201ENST00000341529 ZNF830Q96NB3 372 aaPredicted RBP14.21□□□□□ -0.13
CDH5-201ENST00000341529 ECHDC1Q9NTX5 307 aa14.21□□□□□ -0.13
CDH5-201ENST00000341529 PDILTQ8N807 584 aa14.21□□□□□ -0.14
CDH5-201ENST00000341529 CCDC34Q96HJ3 373 aa14.21□□□□□ -0.14
CDH5-201ENST00000341529 SAMD9LQ8IVG5 1584 aa14.2□□□□□ -0.14
CDH5-201ENST00000341529 MEX3CQ5U5Q3 659 aaKnown RBP14.2□□□□□ -0.14
CDH5-201ENST00000341529 LARP1Q6PKG0 1096 aaKnown RBP14.2□□□□□ -0.14
CDH5-201ENST00000341529 COPS6Q7L5N1 327 aa14.2□□□□□ -0.14
CDH5-201ENST00000341529 HIP1O00291 1037 aa14.2□□□□□ -0.14
CDH5-201ENST00000341529 PRKCSHP14314 528 aaPredicted RBP14.2□□□□□ -0.14
CDH5-201ENST00000341529 KIF6Q6ZMV9 814 aa14.2□□□□□ -0.14
CDH5-201ENST00000341529 NUP133Q8WUM0 1156 aa14.2□□□□□ -0.14
CDH5-201ENST00000341529 GCC2Q8IWJ2 1684 aa14.19□□□□□ -0.14
CDH5-201ENST00000341529 ERICH2A1L162 156 aa14.19□□□□□ -0.14
CDH5-201ENST00000341529 GOLIM4O00461 696 aa14.19□□□□□ -0.14
CDH5-201ENST00000341529 ESYT1Q9BSJ8 1104 aa14.19□□□□□ -0.14
CDH5-201ENST00000341529 LGR6Q9HBX8 967 aa14.19□□□□□ -0.14
CDH5-201ENST00000341529 CHD1O14646 1710 aa14.19□□□□□ -0.14
CDH5-201ENST00000341529 PNMA6EA0A0J9YXQ4 647 aa14.19□□□□□ -0.14
CDH5-201ENST00000341529 CCDC192P0DO97 292 aa14.19□□□□□ -0.14
CDH5-201ENST00000341529 XAGE3Q8WTP9 111 aa14.19□□□□□ -0.14
CDH5-201ENST00000341529 HCLS1P14317 486 aaPredicted RBP14.19□□□□□ -0.14
CDH5-201ENST00000341529 LIMCH1Q9UPQ0 1083 aa14.19□□□□□ -0.14
CDH5-201ENST00000341529 MSH6P52701 1360 aa14.18□□□□□ -0.14
CDH5-201ENST00000341529 ZNF521Q96K83 1311 aa14.18□□□□□ -0.14
CDH5-201ENST00000341529 BRPF1P55201 1214 aaPredicted RBP14.18□□□□□ -0.14
CDH5-201ENST00000341529 GIMAP6Q6P9H5 292 aa14.18□□□□□ -0.14
CDH5-201ENST00000341529 ZSCAN30Q86W11 494 aa14.18□□□□□ -0.14
CDH5-201ENST00000341529 FAM177A1Q8N128 213 aaPredicted RBP14.18□□□□□ -0.14
CDH5-201ENST00000341529 ABCF2Q9UG63 623 aa14.18□□□□□ -0.14
CDH5-201ENST00000341529 TBC1D2BQ9UPU7 963 aa14.18□□□□□ -0.14
CDH5-201ENST00000341529 GJB2P29033 226 aa14.18□□□□□ -0.14
CDH5-201ENST00000341529 NUP62CLQ9H1M0 184 aa14.18□□□□□ -0.14
CDH5-201ENST00000341529 NDUFB9Q9Y6M9 179 aa14.18□□□□□ -0.14
CDH5-201ENST00000341529 SAFBQ15424 915 aaKnown RBP eCLIP14.18□□□□□ -0.14
CDH5-201ENST00000341529 NFATC2IPQ8NCF5 419 aa14.17□□□□□ -0.14
CDH5-201ENST00000341529 PPP6R1Q9UPN7 881 aa14.17□□□□□ -0.14
CDH5-201ENST00000341529 ATP8B2P98198 1209 aa14.17□□□□□ -0.14
CDH5-201ENST00000341529 ZSCAN23Q3MJ62 389 aa14.17□□□□□ -0.14
CDH5-201ENST00000341529 CNPY2Q9Y2B0 182 aa14.17□□□□□ -0.14
CDH5-201ENST00000341529 ATP10AO60312 1499 aa14.17□□□□□ -0.14
CDH5-201ENST00000341529 IFIT1P09914 478 aaKnown RBP14.17□□□□□ -0.14
CDH5-201ENST00000341529 PRIM1P49642 420 aaKnown RBP14.17□□□□□ -0.14
CDH5-201ENST00000341529 NPC1L1Q9UHC9 1359 aa14.16□□□□□ -0.14
CDH5-201ENST00000341529 MPHOSPH8Q99549 860 aa14.16□□□□□ -0.14
CDH5-201ENST00000341529 KDM5CP41229 1560 aa14.16□□□□□ -0.14
CDH5-201ENST00000341529 ABCC1P33527 1531 aa14.16□□□□□ -0.14
CDH5-201ENST00000341529 STX6O43752 255 aa14.16□□□□□ -0.14
CDH5-201ENST00000341529 METTL24Q5JXM2 366 aa14.16□□□□□ -0.14
CDH5-201ENST00000341529 UQCRHLA0A096LP55 91 aa14.16□□□□□ -0.14
CDH5-201ENST00000341529 UQCRHP07919 91 aa14.16□□□□□ -0.14
CDH5-201ENST00000341529 HSP90AB3PQ58FF7 597 aa14.16□□□□□ -0.14
CDH5-201ENST00000341529 CCDC144CPQ8IYA2 1237 aa14.16□□□□□ -0.14
CDH5-201ENST00000341529 USP26Q9BXU7 913 aa14.16□□□□□ -0.14
CDH5-201ENST00000341529 NBPF7P0C2Y1 421 aaPredicted RBP14.15□□□□□ -0.14
CDH5-201ENST00000341529 FAM173BQ6P4H8 233 aa14.15□□□□□ -0.14
CDH5-201ENST00000341529 CHST3Q7LGC8 479 aa14.15□□□□□ -0.14
CDH5-201ENST00000341529 TRMT2AQ8IZ69 625 aaKnown RBP14.15□□□□□ -0.14
CDH5-201ENST00000341529 PCMTD1Q96MG8 357 aaPredicted RBP14.15□□□□□ -0.14
CDH5-201ENST00000341529 KLHL40Q2TBA0 621 aa14.15□□□□□ -0.14
CDH5-201ENST00000341529 AMOTQ4VCS5 1084 aa14.15□□□□□ -0.14
CDH5-201ENST00000341529 ISM2Q6H9L7 571 aa14.15□□□□□ -0.14
CDH5-201ENST00000341529 MAST1Q9Y2H9 1570 aa14.15□□□□□ -0.14
CDH5-201ENST00000341529 KCNQ3O43525 872 aa14.15□□□□□ -0.14
CDH5-201ENST00000341529 PKP1Q13835 747 aa14.14□□□□□ -0.15
CDH5-201ENST00000341529 PIK3R4Q99570 1358 aa14.14□□□□□ -0.15
CDH5-201ENST00000341529 EIF2AK4Q9P2K8 1649 aaKnown RBP14.14□□□□□ -0.15
CDH5-201ENST00000341529 ANKRD13DQ6ZTN6 518 aa14.14□□□□□ -0.15
CDH5-201ENST00000341529 TPM3P06753 285 aa14.14□□□□□ -0.15
CDH5-201ENST00000341529 ANKRD1Q15327 319 aa14.14□□□□□ -0.15
CDH5-201ENST00000341529 BIN1O00499 593 aa14.13□□□□□ -0.15
CDH5-201ENST00000341529 CHL1O00533 1208 aa14.13□□□□□ -0.15
CDH5-201ENST00000341529 BRF1Q92994 677 aa14.13□□□□□ -0.15
CDH5-201ENST00000341529 ERVK-7P63135 1459 aa14.13□□□□□ -0.15
CDH5-201ENST00000341529 HOXC9P31274 260 aa14.13□□□□□ -0.15
CDH5-201ENST00000341529 LMBR1LQ6UX01 489 aa14.13□□□□□ -0.15
CDH5-201ENST00000341529 ZSCAN31Q96LW9 406 aaPredicted RBP14.13□□□□□ -0.15
CDH5-201ENST00000341529 BCORL1Q5H9F3 1711 aa14.13□□□□□ -0.15
CDH5-201ENST00000341529 CD2BP2O95400 341 aaKnown RBP14.13□□□□□ -0.15
CDH5-201ENST00000341529 GSPT1P15170 499 aaKnown RBP14.13□□□□□ -0.15
CDH5-201ENST00000341529 HYPKQ9NX55 129 aa14.13□□□□□ -0.15
CDH5-201ENST00000341529 IQSEC3Q9UPP2 1182 aaPredicted RBP14.13□□□□□ -0.15
CDH5-201ENST00000341529 RBM8AQ9Y5S9 174 aaKnown RBP14.13□□□□□ -0.15
CDH5-201ENST00000341529 CHMLP26374 656 aa14.13□□□□□ -0.15
CDH5-201ENST00000341529 DNM1Q05193 864 aaKnown RBP14.13□□□□□ -0.15
CDH5-201ENST00000341529 RAB3GAP1Q15042 981 aa14.13□□□□□ -0.15
CDH5-201ENST00000341529 MAP3K11Q16584 847 aa14.13□□□□□ -0.15
CDH5-201ENST00000341529 SLC4A8Q2Y0W8 1093 aa14.13□□□□□ -0.15
CDH5-201ENST00000341529 POLR3DP05423 398 aaPredicted RBP14.12□□□□□ -0.15
CDH5-201ENST00000341529 GCP02774 474 aa14.12□□□□□ -0.15
CDH5-201ENST00000341529 USP48Q86UV5 1035 aa14.12□□□□□ -0.15
CDH5-201ENST00000341529 TSPOAP1O95153 1857 aa14.12□□□□□ -0.15
CDH5-201ENST00000341529 GRM8O00222 908 aa14.12□□□□□ -0.15
CDH5-201ENST00000341529 SNX21Q969T3 373 aa14.12□□□□□ -0.15
CDH5-201ENST00000341529 PLEKHF1Q96S99 279 aa14.12□□□□□ -0.15
CDH5-201ENST00000341529 TDO2P48775 406 aa14.11□□□□□ -0.15
CDH5-201ENST00000341529 TMX4Q9H1E5 349 aaPredicted RBP14.11□□□□□ -0.15
CDH5-201ENST00000341529 RRAGDQ9NQL2 400 aaPredicted RBP14.11□□□□□ -0.15
CDH5-201ENST00000341529 MINDY4BA8MYZ0 360 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms