RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 RAB3GAP1Q15042 981 aa24.68■■□□□ 1.54
SPG7-202ENST00000341316 IL1RAPL2Q9NP60 686 aa24.68■■□□□ 1.54
SPG7-202ENST00000341316 STAP2Q9UGK3 403 aa24.68■■□□□ 1.54
SPG7-202ENST00000341316 HEG1Q9ULI3 1381 aa24.68■■□□□ 1.54
SPG7-202ENST00000341316 ALS2Q96Q42 1657 aa24.68■■□□□ 1.54
SPG7-202ENST00000341316 REC8O95072 547 aa24.68■■□□□ 1.54
SPG7-202ENST00000341316 DDX11L8A8MPP1 907 aa24.67■■□□□ 1.54
SPG7-202ENST00000341316 DBF4Q9UBU7 674 aaPredicted RBP24.66■■□□□ 1.54
SPG7-202ENST00000341316 UNC5CLQ8IV45 518 aa24.66■■□□□ 1.54
SPG7-202ENST00000341316 PANK2Q9BZ23 570 aa24.66■■□□□ 1.54
SPG7-202ENST00000341316 TMEM94Q12767 1356 aa24.66■■□□□ 1.54
SPG7-202ENST00000341316 SRGAP3O43295 1099 aa24.65■■□□□ 1.54
SPG7-202ENST00000341316 SURF6O75683 361 aaKnown RBP24.65■■□□□ 1.54
SPG7-202ENST00000341316 CHMP4AQ9BY43 222 aa24.65■■□□□ 1.54
SPG7-202ENST00000341316 ATF3P18847 181 aa24.64■■□□□ 1.53
SPG7-202ENST00000341316 NUTM1Q86Y26 1132 aa24.64■■□□□ 1.53
SPG7-202ENST00000341316 RILPL2Q969X0 211 aa24.64■■□□□ 1.53
SPG7-202ENST00000341316 ESYT1Q9BSJ8 1104 aa24.64■■□□□ 1.53
SPG7-202ENST00000341316 SIPA1L3O60292 1781 aaPredicted RBP24.63■■□□□ 1.53
SPG7-202ENST00000341316 TRIM6-TRIM34B2RNG4 842 aa24.63■■□□□ 1.53
SPG7-202ENST00000341316 CHMLP26374 656 aa24.63■■□□□ 1.53
SPG7-202ENST00000341316 MAP3K2Q9Y2U5 619 aa24.63■■□□□ 1.53
SPG7-202ENST00000341316 STRCP1A6NGW2 1772 aa24.62■■□□□ 1.53
SPG7-202ENST00000341316 RHPN1Q8TCX5 695 aa24.62■■□□□ 1.53
SPG7-202ENST00000341316 ADAMTS7Q9UKP4 1686 aa24.62■■□□□ 1.53
SPG7-202ENST00000341316 RAB11FIP3O75154 756 aa24.61■■□□□ 1.53
SPG7-202ENST00000341316 CABLES1Q8TDN4 633 aa24.61■■□□□ 1.53
SPG7-202ENST00000341316 NLRP2Q9NX02 1062 aa24.61■■□□□ 1.53
SPG7-202ENST00000341316 SSFA2P28290 1259 aa24.6■■□□□ 1.53
SPG7-202ENST00000341316 SLC39A6Q13433 755 aa24.59■■□□□ 1.53
SPG7-202ENST00000341316 CWF19L2Q2TBE0 894 aaKnown RBP24.59■■□□□ 1.53
SPG7-202ENST00000341316 KSR2Q6VAB6 950 aa24.59■■□□□ 1.53
SPG7-202ENST00000341316 RAPGEF4Q8WZA2 1011 aa24.59■■□□□ 1.53
SPG7-202ENST00000341316 AOX1Q06278 1338 aa24.59■■□□□ 1.53
SPG7-202ENST00000341316 KDM6AO15550 1401 aaPredicted RBP24.59■■□□□ 1.53
SPG7-202ENST00000341316 LMTK3Q96Q04 1460 aa24.59■■□□□ 1.53
SPG7-202ENST00000341316 MRE11P49959 708 aa24.58■■□□□ 1.52
SPG7-202ENST00000341316 PI4K2BQ8TCG2 481 aa24.58■■□□□ 1.52
SPG7-202ENST00000341316 IL25Q9H293 177 aa24.58■■□□□ 1.52
SPG7-202ENST00000341316 HSPA2P54652 639 aa24.57■■□□□ 1.52
SPG7-202ENST00000341316 PDIA6Q15084 440 aa24.57■■□□□ 1.52
SPG7-202ENST00000341316 KIF1BPQ96EK5 621 aa24.57■■□□□ 1.52
SPG7-202ENST00000341316 MEGF6O75095 1541 aa24.57■■□□□ 1.52
SPG7-202ENST00000341316 NPHP3Q7Z494 1330 aa24.56■■□□□ 1.52
SPG7-202ENST00000341316 MAP4K4O95819 1239 aaPredicted RBP24.56■■□□□ 1.52
SPG7-202ENST00000341316 PALD1Q9ULE6 856 aa24.56■■□□□ 1.52
SPG7-202ENST00000341316 ST18O60284 1047 aa24.56■■□□□ 1.52
SPG7-202ENST00000341316 CHRNA2Q15822 529 aa24.56■■□□□ 1.52
SPG7-202ENST00000341316 GBP4Q96PP9 640 aa24.56■■□□□ 1.52
SPG7-202ENST00000341316 ALDH1L1O75891 902 aa24.55■■□□□ 1.52
SPG7-202ENST00000341316 PHKG2P15735 406 aa24.55■■□□□ 1.52
SPG7-202ENST00000341316 ZNF790Q6PG37 636 aa24.55■■□□□ 1.52
SPG7-202ENST00000341316 HYPKQ9NX55 129 aa24.55■■□□□ 1.52
SPG7-202ENST00000341316 COL18A1P39060 1754 aa24.55■■□□□ 1.52
SPG7-202ENST00000341316 MTX1Q13505 466 aa24.55■■□□□ 1.52
SPG7-202ENST00000341316 SLC52A2Q9HAB3 445 aa24.55■■□□□ 1.52
SPG7-202ENST00000341316 NFATC2IPQ8NCF5 419 aa24.54■■□□□ 1.52
SPG7-202ENST00000341316 GRPEL1Q9HAV7 217 aa24.54■■□□□ 1.52
SPG7-202ENST00000341316 ANO2Q9NQ90 1003 aa24.54■■□□□ 1.52
SPG7-202ENST00000341316 C9orf78Q9NZ63 289 aaPredicted RBP24.54■■□□□ 1.52
SPG7-202ENST00000341316 DCCP43146 1447 aa24.54■■□□□ 1.52
SPG7-202ENST00000341316 TATP17735 454 aaPredicted RBP24.54■■□□□ 1.52
SPG7-202ENST00000341316 AIMP1Q12904 312 aaKnown RBP24.54■■□□□ 1.52
SPG7-202ENST00000341316 DDX21Q9NR30 783 aaKnown RBP eCLIP24.54■■□□□ 1.52
SPG7-202ENST00000341316 ZGPATQ8N5A5 531 aaKnown RBP24.53■■□□□ 1.52
SPG7-202ENST00000341316 PKP1Q13835 747 aa24.52■■□□□ 1.52
SPG7-202ENST00000341316 CRYBG1Q9Y4K1 1723 aa24.51■■□□□ 1.51
SPG7-202ENST00000341316 CSB-PGBD3P0DP91 1061 aa24.51■■□□□ 1.51
SPG7-202ENST00000341316 NEK4P51957 841 aa24.51■■□□□ 1.51
SPG7-202ENST00000341316 KAZALD1Q96I82 304 aa24.51■■□□□ 1.51
SPG7-202ENST00000341316 PA2G4Q9UQ80 394 aaKnown RBP24.51■■□□□ 1.51
SPG7-202ENST00000341316 SPG7Q9UQ90 795 aa24.51■■□□□ 1.51
SPG7-202ENST00000341316 TNS3Q68CZ2 1445 aa24.51■■□□□ 1.51
SPG7-202ENST00000341316 SCN11AQ9UI33 1791 aa24.5■■□□□ 1.51
SPG7-202ENST00000341316 CLEC17AQ6ZS10 378 aa24.5■■□□□ 1.51
SPG7-202ENST00000341316 CADPS2Q86UW7 1296 aa24.5■■□□□ 1.51
SPG7-202ENST00000341316 LINS1Q8NG48 757 aa24.5■■□□□ 1.51
SPG7-202ENST00000341316 C5P01031 1676 aa24.5■■□□□ 1.51
SPG7-202ENST00000341316 CYP2E1P05181 493 aaPredicted RBP24.5■■□□□ 1.51
SPG7-202ENST00000341316 HSP90AB4PQ58FF6 505 aa24.49■■□□□ 1.51
SPG7-202ENST00000341316 SUCLG2Q96I99 432 aa24.49■■□□□ 1.51
SPG7-202ENST00000341316 ISY1Q9ULR0 285 aaKnown RBP24.49■■□□□ 1.51
SPG7-202ENST00000341316 CYP27B1O15528 508 aa24.49■■□□□ 1.51
SPG7-202ENST00000341316 ZNF496Q96IT1 587 aaPredicted RBP24.49■■□□□ 1.51
SPG7-202ENST00000341316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.49■■□□□ 1.517e-8■■□□□ 13.7
SPG7-202ENST00000341316 GRM8O00222 908 aa24.48■■□□□ 1.51
SPG7-202ENST00000341316 BAG4O95429 457 aaKnown RBP24.48■■□□□ 1.51
SPG7-202ENST00000341316 IGKV5-2P06315 115 aa24.48■■□□□ 1.51
SPG7-202ENST00000341316 PRKCSHP14314 528 aaPredicted RBP24.48■■□□□ 1.51
SPG7-202ENST00000341316 MYL6BP14649 208 aa24.48■■□□□ 1.51
SPG7-202ENST00000341316 OS9Q13438 667 aaPredicted RBP24.48■■□□□ 1.51
SPG7-202ENST00000341316 IFNL2Q8IZJ0 200 aa24.48■■□□□ 1.51
SPG7-202ENST00000341316 AK9Q5TCS8 1911 aa24.48■■□□□ 1.51
SPG7-202ENST00000341316 SPATA31A3Q5VYP0 1347 aa24.47■■□□□ 1.51
SPG7-202ENST00000341316 DDX58O95786 925 aaKnown RBP24.47■■□□□ 1.51
SPG7-202ENST00000341316 UTYO14607 1347 aa24.47■■□□□ 1.51
SPG7-202ENST00000341316 USP42Q9H9J4 1324 aaKnown RBP24.47■■□□□ 1.51
SPG7-202ENST00000341316 MCCP23508 829 aa24.46■■□□□ 1.51
SPG7-202ENST00000341316 ANAPC15P60006 121 aa24.46■■□□□ 1.51
SPG7-202ENST00000341316 SKOR2Q2VWA4 1001 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms