RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 ABCF2Q9UG63 623 aa15.18■□□□□ 0.02
DNMT1-201ENST00000340748 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.18■□□□□ 0.029e-7■□□□□ 10.8
DNMT1-201ENST00000340748 MAP4K4O95819 1239 aaPredicted RBP15.18■□□□□ 0.02
DNMT1-201ENST00000340748 IFIT1P09914 478 aaKnown RBP15.18■□□□□ 0.02
DNMT1-201ENST00000340748 PDILTQ8N807 584 aa15.18■□□□□ 0.02
DNMT1-201ENST00000340748 SSH1Q8WYL5 1049 aa15.18■□□□□ 0.02
DNMT1-201ENST00000340748 FILIP1LQ4L180 1135 aa15.17■□□□□ 0.02
DNMT1-201ENST00000340748 TRIM22Q8IYM9 498 aa15.17■□□□□ 0.02
DNMT1-201ENST00000340748 CRACR2BQ8N4Y2 399 aaPredicted RBP15.17■□□□□ 0.02
DNMT1-201ENST00000340748 CDC5LQ99459 802 aaKnown RBP15.17■□□□□ 0.02
DNMT1-201ENST00000340748 ZNF771Q7L3S4 317 aaPredicted RBP15.17■□□□□ 0.02
DNMT1-201ENST00000340748 IFIT5Q13325 482 aaKnown RBP15.17■□□□□ 0.02
DNMT1-201ENST00000340748 RRP12Q5JTH9 1297 aaKnown RBP15.17■□□□□ 0.02
DNMT1-201ENST00000340748 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
DNMT1-201ENST00000340748 KIF1BPQ96EK5 621 aa15.17■□□□□ 0.02
DNMT1-201ENST00000340748 WDR78Q5VTH9 848 aa15.16■□□□□ 0.02
DNMT1-201ENST00000340748 LARP1BQ659C4 914 aaKnown RBP15.16■□□□□ 0.02
DNMT1-201ENST00000340748 NIP7Q9Y221 180 aaKnown RBP eCLIP15.16■□□□□ 0.02
DNMT1-201ENST00000340748 STK11IPQ8N1F8 1099 aa15.16■□□□□ 0.02
DNMT1-201ENST00000340748 PTPRKQ15262 1439 aa15.16■□□□□ 0.02
DNMT1-201ENST00000340748 CDKL5O76039 1030 aa15.16■□□□□ 0.02
DNMT1-201ENST00000340748 SMC2O95347 1197 aa15.16■□□□□ 0.02
DNMT1-201ENST00000340748 NF2P35240 595 aa15.16■□□□□ 0.02
DNMT1-201ENST00000340748 R3HCC1Q9Y3T6 440 aaKnown RBP15.16■□□□□ 0.02
DNMT1-201ENST00000340748 ANKRD18BA2A2Z9 1011 aa15.16■□□□□ 0.02
DNMT1-201ENST00000340748 FKBP4Q02790 459 aaKnown RBP eCLIP15.16■□□□□ 0.02
DNMT1-201ENST00000340748 EPS15P42566 896 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 SMARCE1Q969G3 411 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 NLRP3Q96P20 1036 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 HYPKQ9NX55 129 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 CCDC69A6NI79 296 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 MPHOSPH10O00566 681 aaKnown RBP15.15■□□□□ 0.02
DNMT1-201ENST00000340748 TRIM37O94972 964 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 NAP1L1P55209 391 aaKnown RBP15.15■□□□□ 0.02
DNMT1-201ENST00000340748 TPTE2Q6XPS3 522 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 MAP7D2Q96T17 732 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 NYXQ9GZU5 481 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 SHANK2Q9UPX8 1470 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 SLC39A6Q13433 755 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 FAM196AQ6ZSG2 479 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 DACH1Q9UI36 760 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 JAKMIP1Q96N16 626 aaKnown RBP15.15■□□□□ 0.02
DNMT1-201ENST00000340748 TNMDQ9H2S6 317 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 CCDC87Q9NVE4 849 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 HDAC9Q9UKV0 1011 aa15.15■□□□□ 0.02
DNMT1-201ENST00000340748 MX1P20591 662 aa15.14■□□□□ 0.02
DNMT1-201ENST00000340748 MCM4P33991 863 aa15.14■□□□□ 0.02
DNMT1-201ENST00000340748 STK3Q13188 491 aa15.14■□□□□ 0.02
DNMT1-201ENST00000340748 CWC27Q6UX04 472 aaKnown RBP15.14■□□□□ 0.02
DNMT1-201ENST00000340748 IL1RAPL2Q9NP60 686 aa15.14■□□□□ 0.01
DNMT1-201ENST00000340748 DZIP1Q86YF9 867 aaKnown RBP15.14■□□□□ 0.01
DNMT1-201ENST00000340748 GJA3Q9Y6H8 435 aa15.14■□□□□ 0.01
DNMT1-201ENST00000340748 GLRX3O76003 335 aaKnown RBP15.14■□□□□ 0.01
DNMT1-201ENST00000340748 PRIM1P49642 420 aaKnown RBP15.14■□□□□ 0.01
DNMT1-201ENST00000340748 RBM26Q5T8P6 1007 aaKnown RBP15.14■□□□□ 0.01
DNMT1-201ENST00000340748 CDK5RAP3Q96JB5 506 aa15.14■□□□□ 0.01
DNMT1-201ENST00000340748 GRPEL1Q9HAV7 217 aa15.14■□□□□ 0.01
DNMT1-201ENST00000340748 MAGEC2Q9UBF1 373 aaPredicted RBP15.14■□□□□ 0.01
DNMT1-201ENST00000340748 ANKRD36BQ8N2N9 1353 aa15.14■□□□□ 0.01
DNMT1-201ENST00000340748 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
DNMT1-201ENST00000340748 HMGN5P82970 282 aaKnown RBP15.13■□□□□ 0.01
DNMT1-201ENST00000340748 DZIP3Q86Y13 1208 aaKnown RBP15.13■□□□□ 0.01
DNMT1-201ENST00000340748 RUFY1Q96T51 708 aa15.13■□□□□ 0.01
DNMT1-201ENST00000340748 CFAP45Q9UL16 551 aa15.13■□□□□ 0.01
DNMT1-201ENST00000340748 ABCC1P33527 1531 aa15.13■□□□□ 0.01
DNMT1-201ENST00000340748 PTPRCP08575 1304 aa15.13■□□□□ 0.01
DNMT1-201ENST00000340748 KDM4AO75164 1064 aa15.13■□□□□ 0.01
DNMT1-201ENST00000340748 IP6K1Q92551 441 aa15.13■□□□□ 0.01
DNMT1-201ENST00000340748 IL16Q14005 1332 aa15.13■□□□□ 0.01
DNMT1-201ENST00000340748 CDR1P51861 262 aa15.13■□□□□ 0.01
DNMT1-201ENST00000340748 OGFOD1Q8N543 542 aa15.13■□□□□ 0.01
DNMT1-201ENST00000340748 DBF4Q9UBU7 674 aaPredicted RBP15.13■□□□□ 0.01
DNMT1-201ENST00000340748 ATP2B1P20020 1258 aa15.12■□□□□ 0.01
DNMT1-201ENST00000340748 CEBPZQ03701 1054 aaKnown RBP15.12■□□□□ 0.01
DNMT1-201ENST00000340748 AKAP4Q5JQC9 854 aa15.12■□□□□ 0.01
DNMT1-201ENST00000340748 AFF2P51816 1311 aa15.12■□□□□ 0.01
DNMT1-201ENST00000340748 OFD1O75665 1012 aa15.12■□□□□ 0.01
DNMT1-201ENST00000340748 ME1P48163 572 aa15.12■□□□□ 0.01
DNMT1-201ENST00000340748 C20orf194Q5TEA3 1177 aa15.12■□□□□ 0.01
DNMT1-201ENST00000340748 MSL1Q68DK7 614 aa15.12■□□□□ 0.01
DNMT1-201ENST00000340748 SLF2Q8IX21 1173 aa15.12■□□□□ 0.01
DNMT1-201ENST00000340748 ABCA8O94911 1581 aa15.12■□□□□ 0.01
DNMT1-201ENST00000340748 EXOC6BQ9Y2D4 811 aa15.11■□□□□ 0.01
DNMT1-201ENST00000340748 SAMD9Q5K651 1589 aa15.11■□□□□ 0.01
DNMT1-201ENST00000340748 MYO5CQ9NQX4 1742 aa15.11■□□□□ 0.01
DNMT1-201ENST00000340748 HSPA1LP34931 641 aa15.11■□□□□ 0.01
DNMT1-201ENST00000340748 NFATC2IPQ8NCF5 419 aa15.11■□□□□ 0.01
DNMT1-201ENST00000340748 DCAF5Q96JK2 942 aa15.11■□□□□ 0.01
DNMT1-201ENST00000340748 BCS1LQ9Y276 419 aa15.11■□□□□ 0.01
DNMT1-201ENST00000340748 NUTM1Q86Y26 1132 aa15.11■□□□□ 0.01
DNMT1-201ENST00000340748 SPATA32Q96LK8 384 aa15.11■□□□□ 0.01
DNMT1-201ENST00000340748 USP5P45974 858 aa15.11■□□□□ 0.01
DNMT1-201ENST00000340748 CCDC152Q4G0S7 254 aa15.11■□□□□ 0.01
DNMT1-201ENST00000340748 ERCC4Q92889 916 aaPredicted RBP15.11■□□□□ 0.01
DNMT1-201ENST00000340748 NOL7Q9UMY1 257 aaKnown RBP15.11■□□□□ 0.01
DNMT1-201ENST00000340748 MAGI3Q5TCQ9 1506 aa15.11■□□□□ 0.01
DNMT1-201ENST00000340748 SLC5A1P13866 664 aa15.1■□□□□ 0.01
DNMT1-201ENST00000340748 HSP90B2PQ58FF3 399 aa15.1■□□□□ 0.01
DNMT1-201ENST00000340748 PRM3Q9NNZ6 103 aa15.1■□□□□ 0.01
DNMT1-201ENST00000340748 PLEKHH1Q9ULM0 1364 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms