RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 RASSF7Q02833 373 aa18.75■□□□□ 0.59
UPK3BL1-201ENST00000340457 NFIXQ14938 502 aa18.75■□□□□ 0.59
UPK3BL1-201ENST00000340457 AMER1Q5JTC6 1135 aaPredicted RBP18.75■□□□□ 0.59
UPK3BL1-201ENST00000340457 ZBTB1Q9Y2K1 713 aa18.75■□□□□ 0.59
UPK3BL1-201ENST00000340457 SBF1O95248 1867 aa18.75■□□□□ 0.59
UPK3BL1-201ENST00000340457 PCNTO95613 3336 aa18.74■□□□□ 0.59
UPK3BL1-201ENST00000340457 KDM2BQ8NHM5 1336 aa18.74■□□□□ 0.59
UPK3BL1-201ENST00000340457 COL15A1P39059 1388 aa18.74■□□□□ 0.59
UPK3BL1-201ENST00000340457 AFDNP55196 1824 aaKnown RBP18.74■□□□□ 0.59
UPK3BL1-201ENST00000340457 VIRMAQ69YN4 1812 aaKnown RBP18.74■□□□□ 0.59
UPK3BL1-201ENST00000340457 MTHFSDQ2M296 383 aaKnown RBP18.74■□□□□ 0.59
UPK3BL1-201ENST00000340457 NARFQ9UHQ1 456 aa18.74■□□□□ 0.59
UPK3BL1-201ENST00000340457 WDR90Q96KV7 1748 aa18.73■□□□□ 0.59
UPK3BL1-201ENST00000340457 CANXP27824 592 aaKnown RBP18.73■□□□□ 0.59
UPK3BL1-201ENST00000340457 BCL2L12Q9HB09 334 aa18.73■□□□□ 0.59
UPK3BL1-201ENST00000340457 CNGB1Q14028 1251 aaPredicted RBP18.72■□□□□ 0.59
UPK3BL1-201ENST00000340457 BICDL1Q6ZP65 573 aa18.72■□□□□ 0.59
UPK3BL1-201ENST00000340457 MRC1P22897 1456 aa18.72■□□□□ 0.59
UPK3BL1-201ENST00000340457 SERPINB2P05120 415 aa18.71■□□□□ 0.59
UPK3BL1-201ENST00000340457 PRELPP51888 382 aa18.71■□□□□ 0.59
UPK3BL1-201ENST00000340457 CC2D1BQ5T0F9 858 aaKnown RBP18.71■□□□□ 0.59
UPK3BL1-201ENST00000340457 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
UPK3BL1-201ENST00000340457 FSTL1Q12841 308 aa18.7■□□□□ 0.58
UPK3BL1-201ENST00000340457 KIF7Q2M1P5 1343 aa18.7■□□□□ 0.58
UPK3BL1-201ENST00000340457 CARMIL3Q8ND23 1372 aa18.69■□□□□ 0.58
UPK3BL1-201ENST00000340457 DIAPH1O60610 1272 aaKnown RBP18.69■□□□□ 0.58
UPK3BL1-201ENST00000340457 C2CD5Q86YS7 1000 aa18.69■□□□□ 0.58
UPK3BL1-201ENST00000340457 KLRG1Q96E93 195 aa18.69■□□□□ 0.58
UPK3BL1-201ENST00000340457 NRXN2Q9P2S2 1712 aa18.67■□□□□ 0.58
UPK3BL1-201ENST00000340457 CCDC24Q8N4L8 307 aa18.67■□□□□ 0.58
UPK3BL1-201ENST00000340457 TTLL6Q8N841 843 aa18.67■□□□□ 0.58
UPK3BL1-201ENST00000340457 ZNF330Q9Y3S2 320 aaPredicted RBP18.67■□□□□ 0.58
UPK3BL1-201ENST00000340457 TNRC6CQ9HCJ0 1690 aaKnown RBP18.66■□□□□ 0.58
UPK3BL1-201ENST00000340457 LMNB1P20700 586 aa18.66■□□□□ 0.58
UPK3BL1-201ENST00000340457 TTC5Q8N0Z6 440 aa18.66■□□□□ 0.58
UPK3BL1-201ENST00000340457 VSIG10Q8N0Z9 540 aa18.66■□□□□ 0.58
UPK3BL1-201ENST00000340457 ZNF219Q9P2Y4 722 aaPredicted RBP18.66■□□□□ 0.58
UPK3BL1-201ENST00000340457 CCDC88AQ3V6T2 1871 aa18.66■□□□□ 0.58
UPK3BL1-201ENST00000340457 H0YIN7 160 aa18.65■□□□□ 0.58
UPK3BL1-201ENST00000340457 EIF5P55010 431 aaKnown RBP18.65■□□□□ 0.58
UPK3BL1-201ENST00000340457 SMC1BQ8NDV3 1235 aa18.65■□□□□ 0.58
UPK3BL1-201ENST00000340457 ZNF496Q96IT1 587 aaPredicted RBP18.65■□□□□ 0.58
UPK3BL1-201ENST00000340457 UBR2Q8IWV8 1755 aa18.64■□□□□ 0.57
UPK3BL1-201ENST00000340457 DLEC1Q9Y238 1755 aa18.64■□□□□ 0.57
UPK3BL1-201ENST00000340457 NFKBIEO00221 500 aa18.64■□□□□ 0.57
UPK3BL1-201ENST00000340457 U2SURPO15042 1029 aaKnown RBP18.64■□□□□ 0.57
UPK3BL1-201ENST00000340457 PER1O15534 1290 aaPredicted RBP18.64■□□□□ 0.57
UPK3BL1-201ENST00000340457 STARD3NLO95772 234 aa18.64■□□□□ 0.57
UPK3BL1-201ENST00000340457 TBC1D9BQ66K14 1250 aa18.64■□□□□ 0.57
UPK3BL1-201ENST00000340457 TBC1D2BQ9UPU7 963 aa18.64■□□□□ 0.57
UPK3BL1-201ENST00000340457 GLTPD2A6NH11 291 aa18.63■□□□□ 0.57
UPK3BL1-201ENST00000340457 COL13A1Q5TAT6 717 aaPredicted RBP18.63■□□□□ 0.57
UPK3BL1-201ENST00000340457 JMYQ8N9B5 988 aa18.63■□□□□ 0.57
UPK3BL1-201ENST00000340457 IL17REQ8NFR9 667 aa18.63■□□□□ 0.57
UPK3BL1-201ENST00000340457 ZNF622Q969S3 477 aaKnown RBP eCLIP18.63■□□□□ 0.572e-6■■■■□ 25.6
UPK3BL1-201ENST00000340457 VEGFAP15692 232 aaPredicted RBP18.62■□□□□ 0.57
UPK3BL1-201ENST00000340457 TEFQ10587 303 aa18.62■□□□□ 0.57
UPK3BL1-201ENST00000340457 ZC3H4Q9UPT8 1303 aaKnown RBP18.61■□□□□ 0.57
UPK3BL1-201ENST00000340457 ANKRD31Q8N7Z5 1873 aa18.6■□□□□ 0.57
UPK3BL1-201ENST00000340457 A0A087WZG4 1122 aa18.6■□□□□ 0.57
UPK3BL1-201ENST00000340457 GNAT3A8MTJ3 354 aa18.6■□□□□ 0.57
UPK3BL1-201ENST00000340457 C21orf2O43822 256 aa18.6■□□□□ 0.57
UPK3BL1-201ENST00000340457 A1BGP04217 495 aa18.6■□□□□ 0.57
UPK3BL1-201ENST00000340457 ZNF790Q6PG37 636 aa18.6■□□□□ 0.57
UPK3BL1-201ENST00000340457 TIAM2Q8IVF5 1701 aa18.6■□□□□ 0.57
UPK3BL1-201ENST00000340457 HEG1Q9ULI3 1381 aa18.6■□□□□ 0.57
UPK3BL1-201ENST00000340457 PRR5LQ6MZQ0 368 aa18.59■□□□□ 0.57
UPK3BL1-201ENST00000340457 COL3A1P02461 1466 aaPredicted RBP18.58■□□□□ 0.57
UPK3BL1-201ENST00000340457 POTECB2RU33 542 aa18.58■□□□□ 0.57
UPK3BL1-201ENST00000340457 KCNQ3O43525 872 aa18.58■□□□□ 0.57
UPK3BL1-201ENST00000340457 CAPN15O75808 1086 aa18.57■□□□□ 0.56
UPK3BL1-201ENST00000340457 PIP4K2AP48426 406 aaPredicted RBP18.57■□□□□ 0.56
UPK3BL1-201ENST00000340457 GAS2L2Q8NHY3 880 aa18.57■□□□□ 0.56
UPK3BL1-201ENST00000340457 BRIP1Q9BX63 1249 aa18.57■□□□□ 0.56
UPK3BL1-201ENST00000340457 COL11A2P13942 1736 aaPredicted RBP18.57■□□□□ 0.56
UPK3BL1-201ENST00000340457 NPHP1O15259 732 aa18.56■□□□□ 0.56
UPK3BL1-201ENST00000340457 PDE6BP35913 854 aa18.56■□□□□ 0.56
UPK3BL1-201ENST00000340457 ERFEQ4G0M1 354 aa18.56■□□□□ 0.56
UPK3BL1-201ENST00000340457 PHACTR3Q96KR7 559 aa18.56■□□□□ 0.56
UPK3BL1-201ENST00000340457 SCN7AQ01118 1682 aa18.56■□□□□ 0.56
UPK3BL1-201ENST00000340457 IL6STP40189 918 aaPredicted RBP18.55■□□□□ 0.56
UPK3BL1-201ENST00000340457 FMNL2Q96PY5 1086 aa18.55■□□□□ 0.56
UPK3BL1-201ENST00000340457 TEX13AQ9BXU3 409 aaPredicted RBP18.55■□□□□ 0.56
UPK3BL1-201ENST00000340457 SIPA1L3O60292 1781 aaPredicted RBP18.55■□□□□ 0.56
UPK3BL1-201ENST00000340457 CAMTA2O94983 1202 aa18.54■□□□□ 0.56
UPK3BL1-201ENST00000340457 DPY19L2Q6NUT2 758 aa18.54■□□□□ 0.56
UPK3BL1-201ENST00000340457 NPM2Q86SE8 214 aaKnown RBP18.54■□□□□ 0.56
UPK3BL1-201ENST00000340457 CNBD1Q8NA66 436 aa18.54■□□□□ 0.56
UPK3BL1-201ENST00000340457 SETDB2Q96T68 719 aa18.54■□□□□ 0.56
UPK3BL1-201ENST00000340457 SLX4Q8IY92 1834 aa18.53■□□□□ 0.56
UPK3BL1-201ENST00000340457 PRAMEF22A3QJZ6 481 aa18.53■□□□□ 0.56
UPK3BL1-201ENST00000340457 CACNA1SQ13698 1873 aa18.53■□□□□ 0.56
UPK3BL1-201ENST00000340457 FER1L6Q2WGJ9 1857 aa18.53■□□□□ 0.56
UPK3BL1-201ENST00000340457 BTBD11A6QL63 1104 aa18.52■□□□□ 0.56
UPK3BL1-201ENST00000340457 PRKAR2BP31323 418 aa18.52■□□□□ 0.56
UPK3BL1-201ENST00000340457 DZIP3Q86Y13 1208 aaKnown RBP18.52■□□□□ 0.56
UPK3BL1-201ENST00000340457 USP16Q9Y5T5 823 aa18.52■□□□□ 0.56
UPK3BL1-201ENST00000340457 DICER1Q9UPY3 1922 aaKnown RBP18.51■□□□□ 0.55
UPK3BL1-201ENST00000340457 POTEIP0CG38 1075 aa18.51■□□□□ 0.55
UPK3BL1-201ENST00000340457 POTEJP0CG39 1038 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms