RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 PARP4Q9UKK3 1724 aaKnown RBP20.14■□□□□ 0.81
LITAF-201ENST00000339430 PKD1L3Q7Z443 1732 aa20.14■□□□□ 0.81
LITAF-201ENST00000339430 SDSP20132 328 aa20.14■□□□□ 0.81
LITAF-201ENST00000339430 TEFQ10587 303 aa20.14■□□□□ 0.81
LITAF-201ENST00000339430 FKBP5Q13451 457 aaPredicted RBP20.14■□□□□ 0.81
LITAF-201ENST00000339430 ZCRB1Q8TBF4 217 aaKnown RBP20.13■□□□□ 0.81
LITAF-201ENST00000339430 FLIIQ13045 1269 aa20.13■□□□□ 0.81
LITAF-201ENST00000339430 K7ELQ4 463 aaPredicted RBP20.12■□□□□ 0.81
LITAF-201ENST00000339430 HMMRO75330 724 aa20.12■□□□□ 0.81
LITAF-201ENST00000339430 CCDC30Q5VVM6 783 aa20.12■□□□□ 0.81
LITAF-201ENST00000339430 TRAK2O60296 914 aa20.11■□□□□ 0.81
LITAF-201ENST00000339430 EXOC6BQ9Y2D4 811 aa20.11■□□□□ 0.81
LITAF-201ENST00000339430 GNAI2P04899 355 aa20.1■□□□□ 0.81
LITAF-201ENST00000339430 TNPO1Q92973 898 aaKnown RBP20.1■□□□□ 0.81
LITAF-201ENST00000339430 C8orf37Q96NL8 207 aa20.1■□□□□ 0.81
LITAF-201ENST00000339430 KDM6AO15550 1401 aaPredicted RBP20.1■□□□□ 0.81
LITAF-201ENST00000339430 BABAM1Q9NWV8 329 aa20.1■□□□□ 0.81
LITAF-201ENST00000339430 PCDH11XQ9BZA7 1347 aa20.1■□□□□ 0.81
LITAF-201ENST00000339430 PCDH11YQ9BZA8 1340 aa20.1■□□□□ 0.81
LITAF-201ENST00000339430 SPATA31A6Q5VVP1 1343 aa20.09■□□□□ 0.81
LITAF-201ENST00000339430 NRAPQ86VF7 1730 aa20.09■□□□□ 0.81
LITAF-201ENST00000339430 BTBD11A6QL63 1104 aa20.09■□□□□ 0.81
LITAF-201ENST00000339430 NGLY1Q96IV0 654 aa20.09■□□□□ 0.81
LITAF-201ENST00000339430 SLIT2O94813 1529 aa20.09■□□□□ 0.81
LITAF-201ENST00000339430 ADAMTS7Q9UKP4 1686 aa20.08■□□□□ 0.81
LITAF-201ENST00000339430 TSHZ3Q63HK5 1081 aa20.08■□□□□ 0.81
LITAF-201ENST00000339430 DDX54Q8TDD1 881 aaKnown RBP20.08■□□□□ 0.81
LITAF-201ENST00000339430 DCAF5Q96JK2 942 aa20.08■□□□□ 0.81
LITAF-201ENST00000339430 USP26Q9BXU7 913 aa20.08■□□□□ 0.81
LITAF-201ENST00000339430 AK9Q5TCS8 1911 aa20.07■□□□□ 0.8
LITAF-201ENST00000339430 SCN11AQ9UI33 1791 aa20.07■□□□□ 0.8
LITAF-201ENST00000339430 LRP6O75581 1613 aa20.07■□□□□ 0.8
LITAF-201ENST00000339430 PNMA6EA0A0J9YXQ4 647 aa20.06■□□□□ 0.8
LITAF-201ENST00000339430 CASC1Q6TDU7 716 aa20.06■□□□□ 0.8
LITAF-201ENST00000339430 NWD2Q9ULI1 1742 aa20.06■□□□□ 0.8
LITAF-201ENST00000339430 DDX11L8A8MPP1 907 aa20.06■□□□□ 0.8
LITAF-201ENST00000339430 KCNQ3O43525 872 aa20.06■□□□□ 0.8
LITAF-201ENST00000339430 CIZ1Q9ULV3 898 aaPredicted RBP20.06■□□□□ 0.8
LITAF-201ENST00000339430 CCDC9Q9Y3X0 531 aaKnown RBP20.06■□□□□ 0.8
LITAF-201ENST00000339430 SPATA31A1Q5TZJ5 1347 aa20.05■□□□□ 0.8
LITAF-201ENST00000339430 PDE1AP54750 535 aa20.05■□□□□ 0.8
LITAF-201ENST00000339430 RAB3GAP1Q15042 981 aa20.05■□□□□ 0.8
LITAF-201ENST00000339430 NFATC2IPQ8NCF5 419 aa20.05■□□□□ 0.8
LITAF-201ENST00000339430 SLC52A2Q9HAB3 445 aa20.05■□□□□ 0.8
LITAF-201ENST00000339430 CACNA1FO60840 1977 aa20.05■□□□□ 0.8
LITAF-201ENST00000339430 PHAXQ9H814 394 aaKnown RBP20.05■□□□□ 0.8
LITAF-201ENST00000339430 DISP2A7MBM2 1401 aa20.04■□□□□ 0.8
LITAF-201ENST00000339430 SHANK3Q9BYB0 1731 aa20.04■□□□□ 0.8
LITAF-201ENST00000339430 KDM3BQ7LBC6 1761 aa20.04■□□□□ 0.8
LITAF-201ENST00000339430 RABEP1Q15276 862 aa20.04■□□□□ 0.8
LITAF-201ENST00000339430 L1TD1Q5T7N2 865 aaKnown RBP20.04■□□□□ 0.8
LITAF-201ENST00000339430 HDGFL1Q5TGJ6 251 aa20.04■□□□□ 0.8
LITAF-201ENST00000339430 UNC5CLQ8IV45 518 aa20.04■□□□□ 0.8
LITAF-201ENST00000339430 LRRFIP2Q9Y608 721 aaKnown RBP20.04■□□□□ 0.8
LITAF-201ENST00000339430 GNAI3P08754 354 aa20.03■□□□□ 0.8
LITAF-201ENST00000339430 SIPA1L3O60292 1781 aaPredicted RBP20.03■□□□□ 0.8
LITAF-201ENST00000339430 EIF2S2P20042 333 aaKnown RBP20.03■□□□□ 0.8
LITAF-201ENST00000339430 EIF4A1P60842 406 aaKnown RBP20.03■□□□□ 0.8
LITAF-201ENST00000339430 SPATA31A5Q5VU36 1347 aa20.03■□□□□ 0.8
LITAF-201ENST00000339430 SPATA31A7Q8IWB4 1347 aa20.03■□□□□ 0.8
LITAF-201ENST00000339430 GOLGA6L3A6NEY3 463 aa20.02■□□□□ 0.8
LITAF-201ENST00000339430 EIF5BO60841 1220 aaKnown RBP20.02■□□□□ 0.8
LITAF-201ENST00000339430 BCL9LQ86UU0 1499 aa20.02■□□□□ 0.8
LITAF-201ENST00000339430 GBP4Q96PP9 640 aa20.02■□□□□ 0.8
LITAF-201ENST00000339430 LRRCC1Q9C099 1032 aa20.02■□□□□ 0.8
LITAF-201ENST00000339430 SSFA2P28290 1259 aa20.01■□□□□ 0.79
LITAF-201ENST00000339430 ATP8B2P98198 1209 aa20.01■□□□□ 0.79
LITAF-201ENST00000339430 CABP4P57796 275 aa20.01■□□□□ 0.79
LITAF-201ENST00000339430 NKX1-1Q15270 411 aaPredicted RBP20.01■□□□□ 0.79
LITAF-201ENST00000339430 MEX3CQ5U5Q3 659 aaKnown RBP20.01■□□□□ 0.79
LITAF-201ENST00000339430 OSBPL3Q9H4L5 887 aa20.01■□□□□ 0.79
LITAF-201ENST00000339430 SLC39A6Q13433 755 aa20■□□□□ 0.79
LITAF-201ENST00000339430 FNBP4Q8N3X1 1017 aaPredicted RBP20■□□□□ 0.79
LITAF-201ENST00000339430 THRAP3Q9Y2W1 955 aaKnown RBP20■□□□□ 0.79
LITAF-201ENST00000339430 EXOC5O00471 708 aa20■□□□□ 0.79
LITAF-201ENST00000339430 ERC2O15083 957 aa20■□□□□ 0.79
LITAF-201ENST00000339430 USP44Q9H0E7 712 aa20■□□□□ 0.79
LITAF-201ENST00000339430 MRC1P22897 1456 aa19.99■□□□□ 0.79
LITAF-201ENST00000339430 WNK3Q9BYP7 1800 aa19.99■□□□□ 0.79
LITAF-201ENST00000339430 FSD2A1L4K1 749 aa19.99■□□□□ 0.79
LITAF-201ENST00000339430 REC8O95072 547 aa19.99■□□□□ 0.79
LITAF-201ENST00000339430 XRCC6P12956 609 aaKnown RBP eCLIP19.99■□□□□ 0.79
LITAF-201ENST00000339430 UBTFL1P0CB47 393 aaPredicted RBP19.98■□□□□ 0.79
LITAF-201ENST00000339430 ZNF790Q6PG37 636 aa19.98■□□□□ 0.79
LITAF-201ENST00000339430 CDCA7Q9BWT1 371 aaPredicted RBP19.98■□□□□ 0.79
LITAF-201ENST00000339430 USP21Q9UK80 565 aa19.98■□□□□ 0.79
LITAF-201ENST00000339430 SALL3Q9BXA9 1300 aa19.98■□□□□ 0.79
LITAF-201ENST00000339430 MX1P20591 662 aa19.98■□□□□ 0.79
LITAF-201ENST00000339430 IBTKQ9P2D0 1353 aaPredicted RBP19.97■□□□□ 0.79
LITAF-201ENST00000339430 N4BP2Q86UW6 1770 aaPredicted RBP19.97■□□□□ 0.79
LITAF-201ENST00000339430 ERVV-2B6SEH9 535 aa19.97■□□□□ 0.79
LITAF-201ENST00000339430 VPS72Q15906 364 aa19.97■□□□□ 0.79
LITAF-201ENST00000339430 RILPL2Q969X0 211 aa19.97■□□□□ 0.79
LITAF-201ENST00000339430 SOS1Q07889 1333 aaPredicted RBP19.97■□□□□ 0.79
LITAF-201ENST00000339430 TRIM6-TRIM34B2RNG4 842 aa19.97■□□□□ 0.79
LITAF-201ENST00000339430 ANXA1P04083 346 aa19.97■□□□□ 0.79
LITAF-201ENST00000339430 PANK2Q9BZ23 570 aa19.97■□□□□ 0.79
LITAF-201ENST00000339430 TUBGCP6Q96RT7 1819 aa19.96■□□□□ 0.79
LITAF-201ENST00000339430 IL1RAPL2Q9NP60 686 aa19.96■□□□□ 0.79
LITAF-201ENST00000339430 CHPF2Q9P2E5 772 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms