RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 U2AF1L5P0DN76 240 aaPredicted RBP26.02■■□□□ 1.76
ITGA4-202ENST00000339307 U2AF1Q01081 240 aaKnown RBP eCLIP26.02■■□□□ 1.76
ITGA4-202ENST00000339307 PIM2Q9P1W9 311 aa26.02■■□□□ 1.76
ITGA4-202ENST00000339307 ZNF330Q9Y3S2 320 aaPredicted RBP26.02■■□□□ 1.76
ITGA4-202ENST00000339307 COL15A1P39059 1388 aa26.02■■□□□ 1.76
ITGA4-202ENST00000339307 POLRMTO00411 1230 aaKnown RBP26.01■■□□□ 1.75
ITGA4-202ENST00000339307 ADCY9O60503 1353 aa26.01■■□□□ 1.75
ITGA4-202ENST00000339307 PHACTR3Q96KR7 559 aa26.01■■□□□ 1.75
ITGA4-202ENST00000339307 KIAA1551Q9HCM1 1747 aa26.01■■□□□ 1.75
ITGA4-202ENST00000339307 NARFQ9UHQ1 456 aa26.01■■□□□ 1.75
ITGA4-202ENST00000339307 ADAMTS7Q9UKP4 1686 aa26■■□□□ 1.75
ITGA4-202ENST00000339307 PPP2R1AP30153 589 aa26■■□□□ 1.75
ITGA4-202ENST00000339307 TM4SF1P30408 202 aa26■■□□□ 1.75
ITGA4-202ENST00000339307 ZNF790Q6PG37 636 aa26■■□□□ 1.75
ITGA4-202ENST00000339307 CHRNA5P30532 468 aa25.99■■□□□ 1.75
ITGA4-202ENST00000339307 ZNF496Q96IT1 587 aaPredicted RBP25.99■■□□□ 1.75
ITGA4-202ENST00000339307 DALRD3Q5D0E6 543 aaKnown RBP25.98■■□□□ 1.75
ITGA4-202ENST00000339307 RSPH6AQ9H0K4 717 aa25.98■■□□□ 1.75
ITGA4-202ENST00000339307 KCNA3P22001 575 aa25.97■■□□□ 1.75
ITGA4-202ENST00000339307 NFIXQ14938 502 aa25.97■■□□□ 1.75
ITGA4-202ENST00000339307 BICDL1Q6ZP65 573 aa25.97■■□□□ 1.75
ITGA4-202ENST00000339307 BTBD11A6QL63 1104 aa25.97■■□□□ 1.75
ITGA4-202ENST00000339307 NPM2Q86SE8 214 aaKnown RBP25.97■■□□□ 1.75
ITGA4-202ENST00000339307 RTF1Q92541 710 aaKnown RBP25.97■■□□□ 1.75
ITGA4-202ENST00000339307 FMNL2Q96PY5 1086 aa25.96■■□□□ 1.75
ITGA4-202ENST00000339307 TEX13AQ9BXU3 409 aaPredicted RBP25.96■■□□□ 1.75
ITGA4-202ENST00000339307 HEG1Q9ULI3 1381 aa25.95■■□□□ 1.75
ITGA4-202ENST00000339307 A0A087WZG4 1122 aa25.95■■□□□ 1.74
ITGA4-202ENST00000339307 UBR2Q8IWV8 1755 aa25.94■■□□□ 1.74
ITGA4-202ENST00000339307 SERPINB2P05120 415 aa25.94■■□□□ 1.74
ITGA4-202ENST00000339307 BCL2L12Q9HB09 334 aa25.93■■□□□ 1.74
ITGA4-202ENST00000339307 KCNQ3O43525 872 aa25.92■■□□□ 1.74
ITGA4-202ENST00000339307 EIF5P55010 431 aaKnown RBP25.91■■□□□ 1.74
ITGA4-202ENST00000339307 MCM10Q7L590 875 aa25.91■■□□□ 1.74
ITGA4-202ENST00000339307 TBC1D2BQ9UPU7 963 aa25.91■■□□□ 1.74
ITGA4-202ENST00000339307 A1BGP04217 495 aa25.9■■□□□ 1.74
ITGA4-202ENST00000339307 C9orf131Q5VYM1 1079 aa25.9■■□□□ 1.74
ITGA4-202ENST00000339307 BRCA1P38398 1863 aaKnown RBP25.9■■□□□ 1.74
ITGA4-202ENST00000339307 CEMIPQ8WUJ3 1361 aa25.89■■□□□ 1.74
ITGA4-202ENST00000339307 SIPA1L3O60292 1781 aaPredicted RBP25.88■■□□□ 1.73
ITGA4-202ENST00000339307 NEFMP07197 916 aa25.88■■□□□ 1.73
ITGA4-202ENST00000339307 DCTN1Q14203 1278 aa25.88■■□□□ 1.73
ITGA4-202ENST00000339307 NPHP1O15259 732 aa25.87■■□□□ 1.73
ITGA4-202ENST00000339307 IL6STP40189 918 aaPredicted RBP25.87■■□□□ 1.73
ITGA4-202ENST00000339307 TBC1D9BQ66K14 1250 aa25.87■■□□□ 1.73
ITGA4-202ENST00000339307 C2CD5Q86YS7 1000 aa25.87■■□□□ 1.73
ITGA4-202ENST00000339307 AFDNP55196 1824 aaKnown RBP25.87■■□□□ 1.73
ITGA4-202ENST00000339307 ARFGEF1Q9Y6D6 1849 aa25.86■■□□□ 1.73
ITGA4-202ENST00000339307 RNF181Q9P0P0 153 aa25.86■■□□□ 1.73
ITGA4-202ENST00000339307 KIF3CO14782 793 aa25.85■■□□□ 1.73
ITGA4-202ENST00000339307 PIP4K2AP48426 406 aaPredicted RBP25.85■■□□□ 1.73
ITGA4-202ENST00000339307 USP16Q9Y5T5 823 aa25.85■■□□□ 1.73
ITGA4-202ENST00000339307 H0YIN7 160 aa25.84■■□□□ 1.73
ITGA4-202ENST00000339307 CCDC24Q8N4L8 307 aa25.83■■□□□ 1.73
ITGA4-202ENST00000339307 PRAMEF22A3QJZ6 481 aa25.82■■□□□ 1.72
ITGA4-202ENST00000339307 TTLL6Q8N841 843 aa25.82■■□□□ 1.72
ITGA4-202ENST00000339307 SNRPA1P09661 255 aaKnown RBP25.81■■□□□ 1.72
ITGA4-202ENST00000339307 HSPA6P17066 643 aa25.81■■□□□ 1.72
ITGA4-202ENST00000339307 DZIP3Q86Y13 1208 aaKnown RBP25.81■■□□□ 1.72
ITGA4-202ENST00000339307 SETDB2Q96T68 719 aa25.81■■□□□ 1.72
ITGA4-202ENST00000339307 NMRK2Q9NPI5 230 aa25.81■■□□□ 1.72
ITGA4-202ENST00000339307 CARMIL3Q8ND23 1372 aa25.81■■□□□ 1.72
ITGA4-202ENST00000339307 HTATSF1O43719 755 aaKnown RBP25.8■■□□□ 1.72
ITGA4-202ENST00000339307 ZNF622Q969S3 477 aaKnown RBP eCLIP25.8■■□□□ 1.72
ITGA4-202ENST00000339307 RASSF7Q02833 373 aa25.8■■□□□ 1.72
ITGA4-202ENST00000339307 MIS18AQ9NYP9 233 aa25.8■■□□□ 1.72
ITGA4-202ENST00000339307 NRXN2Q9P2S2 1712 aa25.79■■□□□ 1.72
ITGA4-202ENST00000339307 C16orf71Q8IYS4 520 aaPredicted RBP25.79■■□□□ 1.72
ITGA4-202ENST00000339307 CAMTA2O94983 1202 aa25.78■■□□□ 1.72
ITGA4-202ENST00000339307 PDE6BP35913 854 aa25.78■■□□□ 1.72
ITGA4-202ENST00000339307 TAF7Q15545 349 aaPredicted RBP25.78■■□□□ 1.72
ITGA4-202ENST00000339307 ZNF219Q9P2Y4 722 aaPredicted RBP25.78■■□□□ 1.72
ITGA4-202ENST00000339307 PRR5LQ6MZQ0 368 aa25.77■■□□□ 1.72
ITGA4-202ENST00000339307 KDM2BQ8NHM5 1336 aa25.76■■□□□ 1.71
ITGA4-202ENST00000339307 TOMM70O94826 608 aa25.76■■□□□ 1.71
ITGA4-202ENST00000339307 CNBD1Q8NA66 436 aa25.76■■□□□ 1.71
ITGA4-202ENST00000339307 SCN7AQ01118 1682 aa25.75■■□□□ 1.71
ITGA4-202ENST00000339307 ST5P78524 1137 aa25.75■■□□□ 1.71
ITGA4-202ENST00000339307 BRIP1Q9BX63 1249 aa25.75■■□□□ 1.71
ITGA4-202ENST00000339307 MAPK8IP3Q9UPT6 1336 aa25.73■■□□□ 1.71
ITGA4-202ENST00000339307 ZNF652Q9Y2D9 606 aa25.73■■□□□ 1.71
ITGA4-202ENST00000339307 PNNQ9H307 717 aaKnown RBP25.72■■□□□ 1.71
ITGA4-202ENST00000339307 RRAGCQ9HB90 399 aa25.72■■□□□ 1.71
ITGA4-202ENST00000339307 PDZRN3Q9UPQ7 1066 aa25.72■■□□□ 1.71
ITGA4-202ENST00000339307 LMNB1P20700 586 aa25.71■■□□□ 1.71
ITGA4-202ENST00000339307 DLEC1Q9Y238 1755 aa25.71■■□□□ 1.71
ITGA4-202ENST00000339307 C21orf2O43822 256 aa25.71■■□□□ 1.71
ITGA4-202ENST00000339307 NBPF5PQ86XG9 351 aaPredicted RBP25.71■■□□□ 1.71
ITGA4-202ENST00000339307 NGEFQ8N5V2 710 aa25.71■■□□□ 1.71
ITGA4-202ENST00000339307 SBF1O95248 1867 aa25.7■■□□□ 1.7
ITGA4-202ENST00000339307 FAM177BA6PVY3 158 aa25.7■■□□□ 1.7
ITGA4-202ENST00000339307 PNISRQ8TF01 805 aaKnown RBP25.7■■□□□ 1.7
ITGA4-202ENST00000339307 THUMPD2Q9BTF0 503 aaKnown RBP25.7■■□□□ 1.7
ITGA4-202ENST00000339307 NBPF26B4DH59 902 aa25.69■■□□□ 1.7
ITGA4-202ENST00000339307 NFE2L2Q16236 605 aa25.69■■□□□ 1.7
ITGA4-202ENST00000339307 NBPF10Q6P3W6 841 aaKnown RBP25.69■■□□□ 1.7
ITGA4-202ENST00000339307 NBPF15Q8N660 670 aa25.69■■□□□ 1.7
ITGA4-202ENST00000339307 PLEKHF1Q96S99 279 aa25.69■■□□□ 1.7
ITGA4-202ENST00000339307 ANKRD31Q8N7Z5 1873 aa25.68■■□□□ 1.7
ITGA4-202ENST00000339307 CLEC4GQ6UXB4 293 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms