RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 PRKAR2BP31323 418 aa15.5■□□□□ 0.07
TREM2-201ENST00000338469 ZNF496Q96IT1 587 aaPredicted RBP15.5■□□□□ 0.07
TREM2-201ENST00000338469 PRKRIP1Q9H875 184 aaPredicted RBP15.5■□□□□ 0.07
TREM2-201ENST00000338469 UBR2Q8IWV8 1755 aa15.49■□□□□ 0.07
TREM2-201ENST00000338469 POLRMTO00411 1230 aaKnown RBP15.49■□□□□ 0.07
TREM2-201ENST00000338469 TGFB2P61812 414 aa15.49■□□□□ 0.07
TREM2-201ENST00000338469 PARP3Q9Y6F1 533 aa15.49■□□□□ 0.07
TREM2-201ENST00000338469 SIPA1L3O60292 1781 aaPredicted RBP15.49■□□□□ 0.07
TREM2-201ENST00000338469 GNAT3A8MTJ3 354 aa15.48■□□□□ 0.07
TREM2-201ENST00000338469 CANXP27824 592 aaKnown RBP15.47■□□□□ 0.07
TREM2-201ENST00000338469 BRCA1P38398 1863 aaKnown RBP15.47■□□□□ 0.07
TREM2-201ENST00000338469 VSIG10Q8N0Z9 540 aa15.47■□□□□ 0.07
TREM2-201ENST00000338469 GAS2L2Q8NHY3 880 aa15.47■□□□□ 0.07
TREM2-201ENST00000338469 BCS1LQ9Y276 419 aa15.47■□□□□ 0.07
TREM2-201ENST00000338469 CEMIPQ8WUJ3 1361 aa15.47■□□□□ 0.07
TREM2-201ENST00000338469 MYBBP1AQ9BQG0 1328 aaKnown RBP15.46■□□□□ 0.07
TREM2-201ENST00000338469 CHRNA5P30532 468 aa15.46■□□□□ 0.07
TREM2-201ENST00000338469 NFIXQ14938 502 aa15.46■□□□□ 0.07
TREM2-201ENST00000338469 ZNF790Q6PG37 636 aa15.46■□□□□ 0.07
TREM2-201ENST00000338469 ZNF526Q8TF50 670 aaPredicted RBP15.46■□□□□ 0.07
TREM2-201ENST00000338469 NARFQ9UHQ1 456 aa15.46■□□□□ 0.07
TREM2-201ENST00000338469 PRAMEF22A3QJZ6 481 aa15.45■□□□□ 0.06
TREM2-201ENST00000338469 EIF5P55010 431 aaKnown RBP15.45■□□□□ 0.06
TREM2-201ENST00000338469 DCTN1Q14203 1278 aa15.45■□□□□ 0.06
TREM2-201ENST00000338469 COL15A1P39059 1388 aa15.45■□□□□ 0.06
TREM2-201ENST00000338469 A1BGP04217 495 aa15.44■□□□□ 0.06
TREM2-201ENST00000338469 U2AF1L5P0DN76 240 aaPredicted RBP15.44■□□□□ 0.06
TREM2-201ENST00000338469 U2AF1Q01081 240 aaKnown RBP eCLIP15.44■□□□□ 0.06
TREM2-201ENST00000338469 TEFQ10587 303 aa15.44■□□□□ 0.06
TREM2-201ENST00000338469 MCM10Q7L590 875 aa15.44■□□□□ 0.06
TREM2-201ENST00000338469 HEG1Q9ULI3 1381 aa15.44■□□□□ 0.06
TREM2-201ENST00000338469 AFDNP55196 1824 aaKnown RBP15.43■□□□□ 0.06
TREM2-201ENST00000338469 ZPR1O75312 459 aa15.43■□□□□ 0.06
TREM2-201ENST00000338469 FCHSD2O94868 740 aa15.43■□□□□ 0.06
TREM2-201ENST00000338469 CFAP53Q96M91 514 aa15.43■□□□□ 0.06
TREM2-201ENST00000338469 GPBP1L1Q9HC44 474 aaPredicted RBP15.43■□□□□ 0.06
TREM2-201ENST00000338469 PIP4K2AP48426 406 aaPredicted RBP15.42■□□□□ 0.06
TREM2-201ENST00000338469 ARHGAP27Q6ZUM4 889 aa15.42■□□□□ 0.06
TREM2-201ENST00000338469 TTC5Q8N0Z6 440 aa15.42■□□□□ 0.06
TREM2-201ENST00000338469 USP16Q9Y5T5 823 aa15.42■□□□□ 0.06
TREM2-201ENST00000338469 CARMIL3Q8ND23 1372 aa15.41■□□□□ 0.06
TREM2-201ENST00000338469 BTBD11A6QL63 1104 aa15.41■□□□□ 0.06
TREM2-201ENST00000338469 HSPA6P17066 643 aa15.41■□□□□ 0.06
TREM2-201ENST00000338469 TBC1D2BQ9UPU7 963 aa15.41■□□□□ 0.06
TREM2-201ENST00000338469 NRXN2Q9P2S2 1712 aa15.4■□□□□ 0.06
TREM2-201ENST00000338469 STARD3NLO95772 234 aa15.4■□□□□ 0.06
TREM2-201ENST00000338469 SERPINB2P05120 415 aa15.4■□□□□ 0.06
TREM2-201ENST00000338469 TBC1D9BQ66K14 1250 aa15.4■□□□□ 0.06
TREM2-201ENST00000338469 BICDL1Q6ZP65 573 aa15.4■□□□□ 0.06
TREM2-201ENST00000338469 MIER1Q8N108 512 aa15.4■□□□□ 0.06
TREM2-201ENST00000338469 CCDC24Q8N4L8 307 aa15.4■□□□□ 0.06
TREM2-201ENST00000338469 PIM2Q9P1W9 311 aa15.4■□□□□ 0.06
TREM2-201ENST00000338469 NUDCQ9Y266 331 aa15.4■□□□□ 0.06
TREM2-201ENST00000338469 KIF3CO14782 793 aa15.39■□□□□ 0.05
TREM2-201ENST00000338469 PRELPP51888 382 aa15.39■□□□□ 0.05
TREM2-201ENST00000338469 FMNL2Q96PY5 1086 aa15.39■□□□□ 0.05
TREM2-201ENST00000338469 MIS18AQ9NYP9 233 aa15.39■□□□□ 0.05
TREM2-201ENST00000338469 ARFGEF1Q9Y6D6 1849 aa15.38■□□□□ 0.05
TREM2-201ENST00000338469 DALRD3Q5D0E6 543 aaKnown RBP15.38■□□□□ 0.05
TREM2-201ENST00000338469 PLEKHF1Q96S99 279 aa15.38■□□□□ 0.05
TREM2-201ENST00000338469 CAMTA2O94983 1202 aa15.37■□□□□ 0.05
TREM2-201ENST00000338469 ZNF330Q9Y3S2 320 aaPredicted RBP15.37■□□□□ 0.05
TREM2-201ENST00000338469 NBPF26B4DH59 902 aa15.36■□□□□ 0.05
TREM2-201ENST00000338469 IL6STP40189 918 aaPredicted RBP15.36■□□□□ 0.05
TREM2-201ENST00000338469 C9orf131Q5VYM1 1079 aa15.36■□□□□ 0.05
TREM2-201ENST00000338469 NBPF10Q6P3W6 841 aaKnown RBP15.36■□□□□ 0.05
TREM2-201ENST00000338469 NBPF15Q8N660 670 aa15.36■□□□□ 0.05
TREM2-201ENST00000338469 TEX13AQ9BXU3 409 aaPredicted RBP15.36■□□□□ 0.05
TREM2-201ENST00000338469 THUMPD2Q9BTF0 503 aaKnown RBP15.35■□□□□ 0.05
TREM2-201ENST00000338469 ANKRD31Q8N7Z5 1873 aa15.35■□□□□ 0.05
TREM2-201ENST00000338469 A0A087WZG4 1122 aa15.34■□□□□ 0.05
TREM2-201ENST00000338469 CCER2I3L3R5 266 aa15.34■□□□□ 0.05
TREM2-201ENST00000338469 PRR5LQ6MZQ0 368 aa15.34■□□□□ 0.05
TREM2-201ENST00000338469 MRS2Q9HD23 443 aa15.34■□□□□ 0.05
TREM2-201ENST00000338469 NMRK2Q9NPI5 230 aa15.34■□□□□ 0.05
TREM2-201ENST00000338469 DLG5Q8TDM6 1919 aa15.34■□□□□ 0.05
TREM2-201ENST00000338469 SBF1O95248 1867 aa15.33■□□□□ 0.05
TREM2-201ENST00000338469 SCN7AQ01118 1682 aa15.33■□□□□ 0.04
TREM2-201ENST00000338469 HTATSF1O43719 755 aaKnown RBP15.33■□□□□ 0.04
TREM2-201ENST00000338469 RASSF7Q02833 373 aa15.33■□□□□ 0.04
TREM2-201ENST00000338469 TAF7Q15545 349 aaPredicted RBP15.33■□□□□ 0.04
TREM2-201ENST00000338469 C2CD5Q86YS7 1000 aa15.33■□□□□ 0.04
TREM2-201ENST00000338469 RTF1Q92541 710 aaKnown RBP15.33■□□□□ 0.04
TREM2-201ENST00000338469 SNRPA1P09661 255 aaKnown RBP15.32■□□□□ 0.04
TREM2-201ENST00000338469 CCDC184Q52MB2 194 aa15.32■□□□□ 0.04
TREM2-201ENST00000338469 DLEC1Q9Y238 1755 aa15.31■□□□□ 0.04
TREM2-201ENST00000338469 DZIP3Q86Y13 1208 aaKnown RBP15.31■□□□□ 0.04
TREM2-201ENST00000338469 COL11A2P13942 1736 aaPredicted RBP15.3■□□□□ 0.04
TREM2-201ENST00000338469 RNF181Q9P0P0 153 aa15.3■□□□□ 0.04
TREM2-201ENST00000338469 BCORQ6W2J9 1755 aa15.29■□□□□ 0.04
TREM2-201ENST00000338469 NFKBIEO00221 500 aa15.29■□□□□ 0.04
TREM2-201ENST00000338469 NFE2L2Q16236 605 aa15.29■□□□□ 0.04
TREM2-201ENST00000338469 HLFQ16534 295 aa15.29■□□□□ 0.04
TREM2-201ENST00000338469 TTLL6Q8N841 843 aa15.29■□□□□ 0.04
TREM2-201ENST00000338469 H0YIN7 160 aa15.28■□□□□ 0.04
TREM2-201ENST00000338469 EIF4A1P60842 406 aaKnown RBP15.28■□□□□ 0.04
TREM2-201ENST00000338469 DNAJC5GQ8N7S2 189 aa15.28■□□□□ 0.04
TREM2-201ENST00000338469 SETDB2Q96T68 719 aa15.28■□□□□ 0.04
TREM2-201ENST00000338469 BRIP1Q9BX63 1249 aa15.28■□□□□ 0.04
TREM2-201ENST00000338469 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms