RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CHRNA5P30532 468 aa17.9■□□□□ 0.46
NUDCD3-201ENST00000338427 MCM10Q7L590 875 aa17.9■□□□□ 0.46
NUDCD3-201ENST00000338427 TTC5Q8N0Z6 440 aa17.9■□□□□ 0.46
NUDCD3-201ENST00000338427 VSIG10Q8N0Z9 540 aa17.9■□□□□ 0.46
NUDCD3-201ENST00000338427 C4AP0C0L4 1744 aa17.89■□□□□ 0.46
NUDCD3-201ENST00000338427 PRAMEF22A3QJZ6 481 aa17.89■□□□□ 0.45
NUDCD3-201ENST00000338427 POLRMTO00411 1230 aaKnown RBP17.89■□□□□ 0.45
NUDCD3-201ENST00000338427 A1BGP04217 495 aa17.89■□□□□ 0.45
NUDCD3-201ENST00000338427 NFIXQ14938 502 aa17.89■□□□□ 0.45
NUDCD3-201ENST00000338427 ARHGAP27Q6ZUM4 889 aa17.89■□□□□ 0.45
NUDCD3-201ENST00000338427 NARFQ9UHQ1 456 aa17.89■□□□□ 0.45
NUDCD3-201ENST00000338427 ADAMTS7Q9UKP4 1686 aa17.89■□□□□ 0.45
NUDCD3-201ENST00000338427 FCHSD2O94868 740 aa17.88■□□□□ 0.45
NUDCD3-201ENST00000338427 PIP4K2AP48426 406 aaPredicted RBP17.88■□□□□ 0.45
NUDCD3-201ENST00000338427 C10orf71Q711Q0 1435 aa17.88■□□□□ 0.45
NUDCD3-201ENST00000338427 ATP10DQ9P241 1426 aa17.88■□□□□ 0.45
NUDCD3-201ENST00000338427 BTBD11A6QL63 1104 aa17.87■□□□□ 0.45
NUDCD3-201ENST00000338427 BICDL1Q6ZP65 573 aa17.87■□□□□ 0.45
NUDCD3-201ENST00000338427 MIS18AQ9NYP9 233 aa17.87■□□□□ 0.45
NUDCD3-201ENST00000338427 TBC1D2BQ9UPU7 963 aa17.87■□□□□ 0.45
NUDCD3-201ENST00000338427 ZNF330Q9Y3S2 320 aaPredicted RBP17.87■□□□□ 0.45
NUDCD3-201ENST00000338427 USP16Q9Y5T5 823 aa17.87■□□□□ 0.45
NUDCD3-201ENST00000338427 KIAA1551Q9HCM1 1747 aa17.86■□□□□ 0.45
NUDCD3-201ENST00000338427 GIGYF1O75420 1035 aaPredicted RBP17.86■□□□□ 0.45
NUDCD3-201ENST00000338427 STARD3NLO95772 234 aa17.86■□□□□ 0.45
NUDCD3-201ENST00000338427 EIF5P55010 431 aaKnown RBP17.86■□□□□ 0.45
NUDCD3-201ENST00000338427 HEG1Q9ULI3 1381 aa17.86■□□□□ 0.45
NUDCD3-201ENST00000338427 COL15A1P39059 1388 aa17.85■□□□□ 0.45
NUDCD3-201ENST00000338427 CCDC24Q8N4L8 307 aa17.85■□□□□ 0.45
NUDCD3-201ENST00000338427 CEMIPQ8WUJ3 1361 aa17.85■□□□□ 0.45
NUDCD3-201ENST00000338427 KIF13BQ9NQT8 1826 aa17.84■□□□□ 0.45
NUDCD3-201ENST00000338427 SERPINB2P05120 415 aa17.84■□□□□ 0.45
NUDCD3-201ENST00000338427 FMNL2Q96PY5 1086 aa17.84■□□□□ 0.45
NUDCD3-201ENST00000338427 SENP3-EIF4A1A0A087X0R7 540 aa17.83■□□□□ 0.44
NUDCD3-201ENST00000338427 TBC1D9BQ66K14 1250 aa17.83■□□□□ 0.44
NUDCD3-201ENST00000338427 RTF1Q92541 710 aaKnown RBP17.83■□□□□ 0.44
NUDCD3-201ENST00000338427 PIM2Q9P1W9 311 aa17.83■□□□□ 0.44
NUDCD3-201ENST00000338427 DDX10Q13206 875 aaKnown RBP17.82■□□□□ 0.44
NUDCD3-201ENST00000338427 GPBP1L1Q9HC44 474 aaPredicted RBP17.82■□□□□ 0.44
NUDCD3-201ENST00000338427 TEX13AQ9BXU3 409 aaPredicted RBP17.81■□□□□ 0.44
NUDCD3-201ENST00000338427 UBR2Q8IWV8 1755 aa17.81■□□□□ 0.44
NUDCD3-201ENST00000338427 ADCY9O60503 1353 aa17.8■□□□□ 0.44
NUDCD3-201ENST00000338427 DALRD3Q5D0E6 543 aaKnown RBP17.8■□□□□ 0.44
NUDCD3-201ENST00000338427 PLEKHF1Q96S99 279 aa17.8■□□□□ 0.44
NUDCD3-201ENST00000338427 THUMPD2Q9BTF0 503 aaKnown RBP17.8■□□□□ 0.44
NUDCD3-201ENST00000338427 SIPA1L3O60292 1781 aaPredicted RBP17.8■□□□□ 0.44
NUDCD3-201ENST00000338427 A0A087WZG4 1122 aa17.79■□□□□ 0.44
NUDCD3-201ENST00000338427 CAMTA2O94983 1202 aa17.78■□□□□ 0.44
NUDCD3-201ENST00000338427 IL6STP40189 918 aaPredicted RBP17.78■□□□□ 0.44
NUDCD3-201ENST00000338427 TAF7Q15545 349 aaPredicted RBP17.78■□□□□ 0.44
NUDCD3-201ENST00000338427 C9orf131Q5VYM1 1079 aa17.78■□□□□ 0.44
NUDCD3-201ENST00000338427 CARMIL3Q8ND23 1372 aa17.78■□□□□ 0.44
NUDCD3-201ENST00000338427 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.44
NUDCD3-201ENST00000338427 NBPF26B4DH59 902 aa17.77■□□□□ 0.44
NUDCD3-201ENST00000338427 NBPF10Q6P3W6 841 aaKnown RBP17.77■□□□□ 0.44
NUDCD3-201ENST00000338427 C2CD5Q86YS7 1000 aa17.77■□□□□ 0.44
NUDCD3-201ENST00000338427 NBPF15Q8N660 670 aa17.77■□□□□ 0.44
NUDCD3-201ENST00000338427 HTATSF1O43719 755 aaKnown RBP17.76■□□□□ 0.43
NUDCD3-201ENST00000338427 SNRPA1P09661 255 aaKnown RBP17.76■□□□□ 0.43
NUDCD3-201ENST00000338427 KIF3CO14782 793 aa17.75■□□□□ 0.43
NUDCD3-201ENST00000338427 DZIP3Q86Y13 1208 aaKnown RBP17.75■□□□□ 0.43
NUDCD3-201ENST00000338427 BRCA1P38398 1863 aaKnown RBP17.74■□□□□ 0.43
NUDCD3-201ENST00000338427 PRELPP51888 382 aa17.74■□□□□ 0.43
NUDCD3-201ENST00000338427 NFE2L2Q16236 605 aa17.74■□□□□ 0.43
NUDCD3-201ENST00000338427 PRR5LQ6MZQ0 368 aa17.74■□□□□ 0.43
NUDCD3-201ENST00000338427 NGEFQ8N5V2 710 aa17.74■□□□□ 0.43
NUDCD3-201ENST00000338427 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
NUDCD3-201ENST00000338427 RASSF7Q02833 373 aa17.73■□□□□ 0.43
NUDCD3-201ENST00000338427 NMRK2Q9NPI5 230 aa17.73■□□□□ 0.43
NUDCD3-201ENST00000338427 H0YIN7 160 aa17.72■□□□□ 0.43
NUDCD3-201ENST00000338427 NPM2Q86SE8 214 aaKnown RBP17.72■□□□□ 0.43
NUDCD3-201ENST00000338427 ZNF622Q969S3 477 aaKnown RBP eCLIP17.72■□□□□ 0.43
NUDCD3-201ENST00000338427 SETDB2Q96T68 719 aa17.72■□□□□ 0.43
NUDCD3-201ENST00000338427 RNF181Q9P0P0 153 aa17.72■□□□□ 0.43
NUDCD3-201ENST00000338427 FAM177BA6PVY3 158 aa17.71■□□□□ 0.43
NUDCD3-201ENST00000338427 NEFMP07197 916 aa17.71■□□□□ 0.43
NUDCD3-201ENST00000338427 HLFQ16534 295 aa17.71■□□□□ 0.43
NUDCD3-201ENST00000338427 TTLL6Q8N841 843 aa17.71■□□□□ 0.43
NUDCD3-201ENST00000338427 EIF4A1P60842 406 aaKnown RBP17.7■□□□□ 0.42
NUDCD3-201ENST00000338427 RALBP1Q15311 655 aa17.7■□□□□ 0.42
NUDCD3-201ENST00000338427 NRXN2Q9P2S2 1712 aa17.69■□□□□ 0.42
NUDCD3-201ENST00000338427 DLG5Q8TDM6 1919 aa17.69■□□□□ 0.42
NUDCD3-201ENST00000338427 CCDC146Q8IYE0 955 aa17.69■□□□□ 0.42
NUDCD3-201ENST00000338427 BRIP1Q9BX63 1249 aa17.69■□□□□ 0.42
NUDCD3-201ENST00000338427 RRP7AQ9Y3A4 280 aaKnown RBP17.69■□□□□ 0.42
NUDCD3-201ENST00000338427 ARFGEF1Q9Y6D6 1849 aa17.68■□□□□ 0.42
NUDCD3-201ENST00000338427 RIPK4P57078 832 aa17.68■□□□□ 0.42
NUDCD3-201ENST00000338427 C21orf2O43822 256 aa17.67■□□□□ 0.42
NUDCD3-201ENST00000338427 NEUROD2Q15784 382 aa17.67■□□□□ 0.42
NUDCD3-201ENST00000338427 RRAGCQ9HB90 399 aa17.67■□□□□ 0.42
NUDCD3-201ENST00000338427 MAPK8IP3Q9UPT6 1336 aa17.67■□□□□ 0.42
NUDCD3-201ENST00000338427 NPHP1O15259 732 aa17.66■□□□□ 0.42
NUDCD3-201ENST00000338427 MYL6BP14649 208 aa17.66■□□□□ 0.42
NUDCD3-201ENST00000338427 PDE6BP35913 854 aa17.66■□□□□ 0.42
NUDCD3-201ENST00000338427 TTLL7Q6ZT98 887 aa17.66■□□□□ 0.42
NUDCD3-201ENST00000338427 CNBD1Q8NA66 436 aa17.66■□□□□ 0.42
NUDCD3-201ENST00000338427 ANKRD31Q8N7Z5 1873 aa17.65■□□□□ 0.42
NUDCD3-201ENST00000338427 NFKBIEO00221 500 aa17.65■□□□□ 0.42
NUDCD3-201ENST00000338427 TMPOP42166 694 aaKnown RBP17.65■□□□□ 0.42
NUDCD3-201ENST00000338427 CLEC4GQ6UXB4 293 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms