RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 SMC5Q8IY18 1101 aa13.62□□□□□ -0.23
MS4A4A-201ENST00000337908 SPATA31A1Q5TZJ5 1347 aa13.62□□□□□ -0.23
MS4A4A-201ENST00000337908 TNS2Q63HR2 1409 aa13.62□□□□□ -0.23
MS4A4A-201ENST00000337908 GNAI2P04899 355 aa13.61□□□□□ -0.23
MS4A4A-201ENST00000337908 SKAP1Q86WV1 359 aa13.61□□□□□ -0.23
MS4A4A-201ENST00000337908 MEIS3Q99687 375 aa13.61□□□□□ -0.23
MS4A4A-201ENST00000337908 HDAC5Q9UQL6 1122 aa13.61□□□□□ -0.23
MS4A4A-201ENST00000337908 SPATA31A6Q5VVP1 1343 aa13.61□□□□□ -0.23
MS4A4A-201ENST00000337908 LRP6O75581 1613 aa13.61□□□□□ -0.23
MS4A4A-201ENST00000337908 ANXA1P04083 346 aa13.61□□□□□ -0.23
MS4A4A-201ENST00000337908 PDE4AP27815 886 aa13.61□□□□□ -0.23
MS4A4A-201ENST00000337908 UBR2Q8IWV8 1755 aa13.61□□□□□ -0.23
MS4A4A-201ENST00000337908 ANKRD44Q8N8A2 993 aa13.61□□□□□ -0.23
MS4A4A-201ENST00000337908 NGLY1Q96IV0 654 aa13.61□□□□□ -0.23
MS4A4A-201ENST00000337908 TOGARAM1Q9Y4F4 1720 aa13.6□□□□□ -0.23
MS4A4A-201ENST00000337908 SLIT2O94813 1529 aa13.6□□□□□ -0.23
MS4A4A-201ENST00000337908 ERBB4Q15303 1308 aa13.6□□□□□ -0.23
MS4A4A-201ENST00000337908 PRAMEF22A3QJZ6 481 aa13.6□□□□□ -0.23
MS4A4A-201ENST00000337908 PI4KAP2A4QPH2 592 aa13.6□□□□□ -0.23
MS4A4A-201ENST00000337908 UBTFL1P0CB47 393 aaPredicted RBP13.6□□□□□ -0.23
MS4A4A-201ENST00000337908 DDB1Q16531 1140 aa13.6□□□□□ -0.23
MS4A4A-201ENST00000337908 FAM161AQ3B820 660 aa13.6□□□□□ -0.23
MS4A4A-201ENST00000337908 KSR2Q6VAB6 950 aa13.6□□□□□ -0.23
MS4A4A-201ENST00000337908 PI4KAP1Q8N8J0 262 aa13.6□□□□□ -0.23
MS4A4A-201ENST00000337908 C8orf37Q96NL8 207 aa13.6□□□□□ -0.23
MS4A4A-201ENST00000337908 ATP10DQ9P241 1426 aa13.59□□□□□ -0.23
MS4A4A-201ENST00000337908 SPATA31A5Q5VU36 1347 aa13.59□□□□□ -0.23
MS4A4A-201ENST00000337908 SPATA31A7Q8IWB4 1347 aa13.59□□□□□ -0.23
MS4A4A-201ENST00000337908 MYL6BP14649 208 aa13.59□□□□□ -0.23
MS4A4A-201ENST00000337908 MAP3K2Q9Y2U5 619 aa13.59□□□□□ -0.23
MS4A4A-201ENST00000337908 ALDH1L1O75891 902 aa13.58□□□□□ -0.24
MS4A4A-201ENST00000337908 NEXNQ0ZGT2 675 aa13.58□□□□□ -0.24
MS4A4A-201ENST00000337908 AIMP1Q12904 312 aaKnown RBP13.58□□□□□ -0.24
MS4A4A-201ENST00000337908 MEX3CQ5U5Q3 659 aaKnown RBP13.58□□□□□ -0.24
MS4A4A-201ENST00000337908 CEP85Q6P2H3 762 aa13.58□□□□□ -0.24
MS4A4A-201ENST00000337908 RIC3Q7Z5B4 369 aa13.58□□□□□ -0.24
MS4A4A-201ENST00000337908 UNC5CLQ8IV45 518 aa13.58□□□□□ -0.24
MS4A4A-201ENST00000337908 ITGB4P16144 1822 aa13.58□□□□□ -0.24
MS4A4A-201ENST00000337908 NUCB1Q02818 461 aa13.57□□□□□ -0.24
MS4A4A-201ENST00000337908 PROSER3Q2NL68 480 aa13.57□□□□□ -0.24
MS4A4A-201ENST00000337908 ANKRD45Q5TZF3 282 aa13.57□□□□□ -0.24
MS4A4A-201ENST00000337908 BARGINQ6ZT62 677 aa13.57□□□□□ -0.24
MS4A4A-201ENST00000337908 CHD1LQ86WJ1 897 aa13.57□□□□□ -0.24
MS4A4A-201ENST00000337908 TEX13AQ9BXU3 409 aaPredicted RBP13.57□□□□□ -0.24
MS4A4A-201ENST00000337908 BACH2Q9BYV9 841 aa13.57□□□□□ -0.24
MS4A4A-201ENST00000337908 RNF39Q9H2S5 420 aa13.57□□□□□ -0.24
MS4A4A-201ENST00000337908 ADCY9O60503 1353 aa13.57□□□□□ -0.24
MS4A4A-201ENST00000337908 USP16Q9Y5T5 823 aa13.57□□□□□ -0.24
MS4A4A-201ENST00000337908 KCPQ6ZWJ8 1503 aa13.57□□□□□ -0.24
MS4A4A-201ENST00000337908 PTCD1O75127 700 aaKnown RBP13.56□□□□□ -0.24
MS4A4A-201ENST00000337908 BEND3Q5T5X7 828 aa13.56□□□□□ -0.24
MS4A4A-201ENST00000337908 SIRT2Q8IXJ6 389 aa13.56□□□□□ -0.24
MS4A4A-201ENST00000337908 XAGE3Q8WTP9 111 aa13.56□□□□□ -0.24
MS4A4A-201ENST00000337908 SYTL4Q96C24 671 aaPredicted RBP13.56□□□□□ -0.24
MS4A4A-201ENST00000337908 C9orf78Q9NZ63 289 aaPredicted RBP13.56□□□□□ -0.24
MS4A4A-201ENST00000337908 DOT1LQ8TEK3 1739 aa13.55□□□□□ -0.24
MS4A4A-201ENST00000337908 A0A0G2JS52 829 aa13.55□□□□□ -0.24
MS4A4A-201ENST00000337908 ANP32AP39687 249 aaKnown RBP13.55□□□□□ -0.24
MS4A4A-201ENST00000337908 PDIA6Q15084 440 aa13.55□□□□□ -0.24
MS4A4A-201ENST00000337908 COPS6Q7L5N1 327 aa13.55□□□□□ -0.24
MS4A4A-201ENST00000337908 LNPKQ9C0E8 428 aa13.55□□□□□ -0.24
MS4A4A-201ENST00000337908 DCTPP1Q9H773 170 aa13.55□□□□□ -0.24
MS4A4A-201ENST00000337908 LRRFIP2Q9Y608 721 aaKnown RBP13.55□□□□□ -0.24
MS4A4A-201ENST00000337908 VPS72Q15906 364 aa13.54□□□□□ -0.24
MS4A4A-201ENST00000337908 VSIG10Q8N0Z9 540 aa13.54□□□□□ -0.24
MS4A4A-201ENST00000337908 LINS1Q8NG48 757 aa13.54□□□□□ -0.24
MS4A4A-201ENST00000337908 PIGBQ92521 554 aa13.54□□□□□ -0.24
MS4A4A-201ENST00000337908 GLI3P10071 1580 aa13.54□□□□□ -0.24
MS4A4A-201ENST00000337908 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.54□□□□□ -0.24
MS4A4A-201ENST00000337908 MYT1Q01538 1121 aa13.53□□□□□ -0.24
MS4A4A-201ENST00000337908 ANKRD13DQ6ZTN6 518 aa13.53□□□□□ -0.24
MS4A4A-201ENST00000337908 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
MS4A4A-201ENST00000337908 USP44Q9H0E7 712 aa13.53□□□□□ -0.24
MS4A4A-201ENST00000337908 USP21Q9UK80 565 aa13.53□□□□□ -0.24
MS4A4A-201ENST00000337908 BCL9O00512 1426 aa13.53□□□□□ -0.24
MS4A4A-201ENST00000337908 STARD3NLO95772 234 aa13.53□□□□□ -0.24
MS4A4A-201ENST00000337908 ATP8B2P98198 1209 aa13.53□□□□□ -0.24
MS4A4A-201ENST00000337908 METTL22Q9BUU2 404 aaPredicted RBP13.52□□□□□ -0.25
MS4A4A-201ENST00000337908 ARFGEF2Q9Y6D5 1785 aa13.52□□□□□ -0.25
MS4A4A-201ENST00000337908 AFDNP55196 1824 aaKnown RBP13.51□□□□□ -0.25
MS4A4A-201ENST00000337908 HSPA1LP34931 641 aa13.51□□□□□ -0.25
MS4A4A-201ENST00000337908 FNBP4Q8N3X1 1017 aaPredicted RBP13.51□□□□□ -0.25
MS4A4A-201ENST00000337908 PLBD2Q8NHP8 589 aa13.51□□□□□ -0.25
MS4A4A-201ENST00000337908 MYD88Q99836 296 aa13.51□□□□□ -0.25
MS4A4A-201ENST00000337908 ATG3Q9NT62 314 aa13.51□□□□□ -0.25
MS4A4A-201ENST00000337908 ASAP1Q9ULH1 1129 aa13.51□□□□□ -0.25
MS4A4A-201ENST00000337908 KAT6BQ8WYB5 2073 aa13.5□□□□□ -0.25
MS4A4A-201ENST00000337908 BCL9LQ86UU0 1499 aa13.5□□□□□ -0.25
MS4A4A-201ENST00000337908 PIP4K2AP48426 406 aaPredicted RBP13.5□□□□□ -0.25
MS4A4A-201ENST00000337908 PRIM1P49642 420 aaKnown RBP13.5□□□□□ -0.25
MS4A4A-201ENST00000337908 FAM98CQ17RN3 349 aaKnown RBP13.5□□□□□ -0.25
MS4A4A-201ENST00000337908 C8orf34Q49A92 452 aa13.5□□□□□ -0.25
MS4A4A-201ENST00000337908 NPM2Q86SE8 214 aaKnown RBP13.5□□□□□ -0.25
MS4A4A-201ENST00000337908 IBTKQ9P2D0 1353 aaPredicted RBP13.5□□□□□ -0.25
MS4A4A-201ENST00000337908 APBB1O00213 710 aa13.5□□□□□ -0.25
MS4A4A-201ENST00000337908 GRM8O00222 908 aa13.5□□□□□ -0.25
MS4A4A-201ENST00000337908 CWF19L2Q2TBE0 894 aaKnown RBP13.5□□□□□ -0.25
MS4A4A-201ENST00000337908 UPF2Q9HAU5 1272 aaKnown RBP13.5□□□□□ -0.25
MS4A4A-201ENST00000337908 A1BGP04217 495 aa13.49□□□□□ -0.25
MS4A4A-201ENST00000337908 NBPF7P0C2Y1 421 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms