RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 IFIT5Q13325 482 aaKnown RBP8.7□□□□□ -1.02
EPHA3-201ENST00000336596 DUSP27Q5VZP5 1158 aa8.7□□□□□ -1.02
EPHA3-201ENST00000336596 RBM17Q96I25 401 aaKnown RBP8.7□□□□□ -1.02
EPHA3-201ENST00000336596 SETDB2Q96T68 719 aa8.7□□□□□ -1.02
EPHA3-201ENST00000336596 SLAIN2Q9P270 581 aa8.7□□□□□ -1.02
EPHA3-201ENST00000336596 COL17A1Q9UMD9 1497 aaPredicted RBP8.7□□□□□ -1.02
EPHA3-201ENST00000336596 KIF1BO60333 1816 aa8.7□□□□□ -1.02
EPHA3-201ENST00000336596 FLT4P35916 1363 aa8.7□□□□□ -1.02
EPHA3-201ENST00000336596 SLFN5Q08AF3 891 aa8.7□□□□□ -1.02
EPHA3-201ENST00000336596 CCDC12Q8WUD4 166 aaPredicted RBP8.7□□□□□ -1.02
EPHA3-201ENST00000336596 SIRT1Q96EB6 747 aa8.7□□□□□ -1.02
EPHA3-201ENST00000336596 RTCBQ9Y3I0 505 aaKnown RBP8.7□□□□□ -1.02
EPHA3-201ENST00000336596 TET3O43151 1660 aa8.7□□□□□ -1.02
EPHA3-201ENST00000336596 PDE3AQ14432 1141 aa8.7□□□□□ -1.02
EPHA3-201ENST00000336596 ZNF804AQ7Z570 1209 aa8.7□□□□□ -1.02
EPHA3-201ENST00000336596 POLKQ9UBT6 870 aa8.7□□□□□ -1.02
EPHA3-201ENST00000336596 TRMT112Q9UI30 125 aaKnown RBP8.7□□□□□ -1.02
EPHA3-201ENST00000336596 IL2RBP14784 551 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 NBPF6Q5VWK0 638 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 NBPF5PQ86XG9 351 aaPredicted RBP8.69□□□□□ -1.02
EPHA3-201ENST00000336596 NBPF4Q96M43 638 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 CARD14Q9BXL6 1004 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 PRDM15P57071 1507 aaPredicted RBP8.69□□□□□ -1.02
EPHA3-201ENST00000336596 PCDH11XQ9BZA7 1347 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 PCDH11YQ9BZA8 1340 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 SCLT1Q96NL6 688 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 SLKQ9H2G2 1235 aaPredicted RBP8.69□□□□□ -1.02
EPHA3-201ENST00000336596 OFD1O75665 1012 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 APBB1IPQ7Z5R6 666 aaPredicted RBP8.69□□□□□ -1.02
EPHA3-201ENST00000336596 PHAXQ9H814 394 aaKnown RBP8.69□□□□□ -1.02
EPHA3-201ENST00000336596 CEP131Q9UPN4 1083 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 NKTRP30414 1462 aaKnown RBP8.69□□□□□ -1.02
EPHA3-201ENST00000336596 CERS3Q8IU89 383 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 AIDAQ96BJ3 306 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 KIF4AO95239 1232 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 UQCRFS1P1P0C7P4 283 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 EIF4A2Q14240 407 aaKnown RBP8.69□□□□□ -1.02
EPHA3-201ENST00000336596 SPRYD3Q8NCJ5 442 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 CCDC150Q8NCX0 1101 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 LNPKQ9C0E8 428 aa8.69□□□□□ -1.02
EPHA3-201ENST00000336596 PTPRTO14522 1441 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 ANKRD2Q9GZV1 360 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 TFCP2L1Q9NZI6 479 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 CCDC196A0A1B0GTZ2 297 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 C6orf229H3BNL8 230 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 SLC4A3P48751 1232 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 GPS2Q13227 327 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 RBM27Q9P2N5 1060 aaKnown RBP8.68□□□□□ -1.02
EPHA3-201ENST00000336596 EDC4Q6P2E9 1401 aaKnown RBP8.68□□□□□ -1.02
EPHA3-201ENST00000336596 LETM1O95202 739 aaPredicted RBP8.68□□□□□ -1.02
EPHA3-201ENST00000336596 PLCG2P16885 1265 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 RAB34Q9BZG1 259 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 ARHGAP31Q2M1Z3 1444 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 METP08581 1390 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 PPP1R12BO60237 982 aaPredicted RBP8.68□□□□□ -1.02
EPHA3-201ENST00000336596 KIF20AO95235 890 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 DRC1Q96MC2 740 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 SH2D4AQ9H788 454 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 MAST3O60307 1309 aa8.68□□□□□ -1.02
EPHA3-201ENST00000336596 PLEKHH1Q9ULM0 1364 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 SNRPA1P09661 255 aaKnown RBP8.67□□□□□ -1.02
EPHA3-201ENST00000336596 NUCB2P80303 420 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 MVPQ14764 893 aaKnown RBP8.67□□□□□ -1.02
EPHA3-201ENST00000336596 FERMT2Q96AC1 680 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 SPATA31E1Q6ZUB1 1445 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 EIF6P56537 245 aaKnown RBP8.67□□□□□ -1.02
EPHA3-201ENST00000336596 AEBP1Q8IUX7 1158 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 FEZ1Q99689 392 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 SOS1Q07889 1333 aaPredicted RBP8.67□□□□□ -1.02
EPHA3-201ENST00000336596 NEBLO76041 1014 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 SMC2O95347 1197 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 ZFYVE9O95405 1425 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 FILIP1LQ4L180 1135 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 C1orf115Q9H7X2 142 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 TMEM94Q12767 1356 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 IMMTQ16891 758 aaKnown RBP8.67□□□□□ -1.02
EPHA3-201ENST00000336596 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 ANKRD18AQ8IVF6 992 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 ZNF444Q8N0Y2 327 aaPredicted RBP8.67□□□□□ -1.02
EPHA3-201ENST00000336596 DBF4Q9UBU7 674 aaPredicted RBP8.67□□□□□ -1.02
EPHA3-201ENST00000336596 IQGAP3Q86VI3 1631 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 MAP3K19Q56UN5 1328 aa8.67□□□□□ -1.02
EPHA3-201ENST00000336596 BICD2Q8TD16 824 aa8.66□□□□□ -1.02
EPHA3-201ENST00000336596 SMARCE1Q969G3 411 aa8.66□□□□□ -1.02
EPHA3-201ENST00000336596 MKNK2Q9HBH9 465 aa8.66□□□□□ -1.02
EPHA3-201ENST00000336596 ATP6V1AP38606 617 aa8.66□□□□□ -1.02
EPHA3-201ENST00000336596 RRP12Q5JTH9 1297 aaKnown RBP8.66□□□□□ -1.02
EPHA3-201ENST00000336596 TPTE2Q6XPS3 522 aa8.66□□□□□ -1.02
EPHA3-201ENST00000336596 IP6K1Q92551 441 aa8.66□□□□□ -1.02
EPHA3-201ENST00000336596 CWC25Q9NXE8 425 aaPredicted RBP8.66□□□□□ -1.02
EPHA3-201ENST00000336596 PARD3Q8TEW0 1356 aa8.66□□□□□ -1.02
EPHA3-201ENST00000336596 MYOM2P54296 1465 aa8.66□□□□□ -1.02
EPHA3-201ENST00000336596 NOL8Q76FK4 1167 aaKnown RBP8.66□□□□□ -1.02
EPHA3-201ENST00000336596 FANCIQ9NVI1 1328 aa8.66□□□□□ -1.02
EPHA3-201ENST00000336596 PLEKHG3A1L390 1219 aa8.66□□□□□ -1.02
EPHA3-201ENST00000336596 FAM83GA6ND36 823 aa8.66□□□□□ -1.02
EPHA3-201ENST00000336596 BAG4O95429 457 aaKnown RBP8.66□□□□□ -1.02
EPHA3-201ENST00000336596 HOXC9P31274 260 aa8.66□□□□□ -1.02
EPHA3-201ENST00000336596 MATR3P43243 847 aaKnown RBP eCLIP8.66□□□□□ -1.02
EPHA3-201ENST00000336596 TNNT3P45378 269 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms