RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 ELL2O00472 640 aaPredicted RBP13.1□□□□□ -0.31
LRAT-201ENST00000336356 ERC2O15083 957 aa13.1□□□□□ -0.31
LRAT-201ENST00000336356 ACBD3Q9H3P7 528 aa13.1□□□□□ -0.31
LRAT-201ENST00000336356 NOB1Q9ULX3 412 aaKnown RBP13.1□□□□□ -0.31
LRAT-201ENST00000336356 VPS37CA5D8V6 355 aaPredicted RBP13.1□□□□□ -0.31
LRAT-201ENST00000336356 NOLC1Q14978 699 aaKnown RBP eCLIP13.1□□□□□ -0.31
LRAT-201ENST00000336356 LRRFIP1Q32MZ4 808 aaKnown RBP13.1□□□□□ -0.31
LRAT-201ENST00000336356 RUFY2Q8WXA3 655 aa13.1□□□□□ -0.31
LRAT-201ENST00000336356 GJD4Q96KN9 370 aaPredicted RBP13.1□□□□□ -0.31
LRAT-201ENST00000336356 DNAJC2Q99543 621 aaKnown RBP13.1□□□□□ -0.31
LRAT-201ENST00000336356 CARD10Q9BWT7 1032 aa13.1□□□□□ -0.31
LRAT-201ENST00000336356 FEZ1Q99689 392 aa13.09□□□□□ -0.31
LRAT-201ENST00000336356 PRKAR2BP31323 418 aa13.09□□□□□ -0.31
LRAT-201ENST00000336356 ST5P78524 1137 aa13.09□□□□□ -0.31
LRAT-201ENST00000336356 SLC4A10Q6U841 1118 aa13.09□□□□□ -0.31
LRAT-201ENST00000336356 ILDR1Q86SU0 546 aaPredicted RBP13.09□□□□□ -0.31
LRAT-201ENST00000336356 ZNF428Q96B54 188 aa13.09□□□□□ -0.31
LRAT-201ENST00000336356 CHMP4CQ96CF2 233 aa13.09□□□□□ -0.31
LRAT-201ENST00000336356 PPP1R9BQ96SB3 815 aa13.09□□□□□ -0.31
LRAT-201ENST00000336356 ROBO2Q9HCK4 1378 aa13.09□□□□□ -0.31
LRAT-201ENST00000336356 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
LRAT-201ENST00000336356 BTBD11A6QL63 1104 aa13.09□□□□□ -0.31
LRAT-201ENST00000336356 H3BQV1 296 aa13.09□□□□□ -0.31
LRAT-201ENST00000336356 CCP110O43303 1012 aa13.09□□□□□ -0.31
LRAT-201ENST00000336356 ZKSCAN1P17029 563 aaPredicted RBP13.09□□□□□ -0.31
LRAT-201ENST00000336356 IFFO2Q5TF58 517 aa13.09□□□□□ -0.31
LRAT-201ENST00000336356 CCAR2Q8N163 923 aaKnown RBP13.09□□□□□ -0.31
LRAT-201ENST00000336356 TNS3Q68CZ2 1445 aa13.08□□□□□ -0.31
LRAT-201ENST00000336356 KIF2AO00139 706 aaPredicted RBP13.08□□□□□ -0.31
LRAT-201ENST00000336356 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
LRAT-201ENST00000336356 HSP90B2PQ58FF3 399 aa13.08□□□□□ -0.32
LRAT-201ENST00000336356 LEKR1Q6ZMV7 388 aa13.08□□□□□ -0.32
LRAT-201ENST00000336356 DCAF5Q96JK2 942 aa13.08□□□□□ -0.32
LRAT-201ENST00000336356 ERICH4A6NGS2 130 aa13.08□□□□□ -0.32
LRAT-201ENST00000336356 CCDC183Q5T5S1 534 aa13.08□□□□□ -0.32
LRAT-201ENST00000336356 VPS72Q15906 364 aa13.08□□□□□ -0.32
LRAT-201ENST00000336356 C9orf78Q9NZ63 289 aaPredicted RBP13.07□□□□□ -0.32
LRAT-201ENST00000336356 SF3A1Q15459 793 aaKnown RBP13.07□□□□□ -0.32
LRAT-201ENST00000336356 VPS37DQ86XT2 251 aa13.07□□□□□ -0.32
LRAT-201ENST00000336356 FIBPO43427 364 aa13.07□□□□□ -0.32
LRAT-201ENST00000336356 HDAC1Q13547 482 aaPredicted RBP13.07□□□□□ -0.32
LRAT-201ENST00000336356 CCDC34Q96HJ3 373 aa13.07□□□□□ -0.32
LRAT-201ENST00000336356 USP25Q9UHP3 1055 aa13.07□□□□□ -0.32
LRAT-201ENST00000336356 ZNF500O60304 480 aaPredicted RBP13.07□□□□□ -0.32
LRAT-201ENST00000336356 NAT10Q9H0A0 1025 aaKnown RBP13.07□□□□□ -0.32
LRAT-201ENST00000336356 CCNL1Q9UK58 526 aaPredicted RBP13.07□□□□□ -0.32
LRAT-201ENST00000336356 KIF24Q5T7B8 1368 aa13.06□□□□□ -0.32
LRAT-201ENST00000336356 UTP14CQ5TAP6 766 aaKnown RBP13.06□□□□□ -0.32
LRAT-201ENST00000336356 PDCP20941 246 aa13.06□□□□□ -0.32
LRAT-201ENST00000336356 PCDHB15Q9Y5E8 787 aa13.06□□□□□ -0.32
LRAT-201ENST00000336356 C1orf167Q5SNV9 1468 aa13.06□□□□□ -0.32
LRAT-201ENST00000336356 ZNF445P59923 1031 aa13.06□□□□□ -0.32
LRAT-201ENST00000336356 SLIT1O75093 1534 aa13.05□□□□□ -0.32
LRAT-201ENST00000336356 KRT222Q8N1A0 295 aa13.05□□□□□ -0.32
LRAT-201ENST00000336356 MYRIPQ8NFW9 859 aa13.05□□□□□ -0.32
LRAT-201ENST00000336356 ATP6V1AP38606 617 aa13.05□□□□□ -0.32
LRAT-201ENST00000336356 AMOTL1Q8IY63 956 aa13.05□□□□□ -0.32
LRAT-201ENST00000336356 ATP7BP35670 1465 aa13.05□□□□□ -0.32
LRAT-201ENST00000336356 PDIA4P13667 645 aaKnown RBP13.05□□□□□ -0.32
LRAT-201ENST00000336356 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
LRAT-201ENST00000336356 CCDC73Q6ZRK6 1079 aa13.05□□□□□ -0.32
LRAT-201ENST00000336356 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
LRAT-201ENST00000336356 CROCC2H7BZ55 1655 aa13.05□□□□□ -0.32
LRAT-201ENST00000336356 PLEKHH1Q9ULM0 1364 aa13.05□□□□□ -0.32
LRAT-201ENST00000336356 ADCY5O95622 1261 aa13.05□□□□□ -0.32
LRAT-201ENST00000336356 CALRP27797 417 aaKnown RBP13.05□□□□□ -0.32
LRAT-201ENST00000336356 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
LRAT-201ENST00000336356 SPATA31E1Q6ZUB1 1445 aa13.04□□□□□ -0.32
LRAT-201ENST00000336356 TRAPPC3LQ5T215 181 aa13.04□□□□□ -0.32
LRAT-201ENST00000336356 TSR2Q969E8 191 aaKnown RBP13.04□□□□□ -0.32
LRAT-201ENST00000336356 PAXBP1Q9Y5B6 917 aa13.04□□□□□ -0.32
LRAT-201ENST00000336356 AEBP1Q8IUX7 1158 aa13.04□□□□□ -0.32
LRAT-201ENST00000336356 TMEM57Q8N5G2 664 aa13.04□□□□□ -0.32
LRAT-201ENST00000336356 TRIM34Q9BYJ4 488 aa13.04□□□□□ -0.32
LRAT-201ENST00000336356 TAF7Q15545 349 aaPredicted RBP13.03□□□□□ -0.32
LRAT-201ENST00000336356 OGFRQ9NZT2 677 aa13.03□□□□□ -0.32
LRAT-201ENST00000336356 NYXQ9GZU5 481 aa13.03□□□□□ -0.32
LRAT-201ENST00000336356 RTL1A6NKG5 1358 aa13.03□□□□□ -0.32
LRAT-201ENST00000336356 DEF6Q9H4E7 631 aa13.03□□□□□ -0.32
LRAT-201ENST00000336356 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.03□□□□□ -0.32
LRAT-201ENST00000336356 FRMPD1Q5SYB0 1578 aa13.03□□□□□ -0.32
LRAT-201ENST00000336356 WDR17Q8IZU2 1322 aa13.03□□□□□ -0.32
LRAT-201ENST00000336356 CEP152O94986 1710 aa13.03□□□□□ -0.32
LRAT-201ENST00000336356 TNNT1P13805 278 aa13.03□□□□□ -0.32
LRAT-201ENST00000336356 BLMP54132 1417 aaPredicted RBP13.03□□□□□ -0.32
LRAT-201ENST00000336356 PPP1R42Q7Z4L9 355 aa13.03□□□□□ -0.32
LRAT-201ENST00000336356 ACSBG1Q96GR2 724 aa13.02□□□□□ -0.32
LRAT-201ENST00000336356 HOXC9P31274 260 aa13.02□□□□□ -0.32
LRAT-201ENST00000336356 RPGRQ92834 1020 aaKnown RBP13.02□□□□□ -0.32
LRAT-201ENST00000336356 RBM27Q9P2N5 1060 aaKnown RBP13.02□□□□□ -0.32
LRAT-201ENST00000336356 PTPN14Q15678 1187 aa13.02□□□□□ -0.33
LRAT-201ENST00000336356 TNMDQ9H2S6 317 aa13.02□□□□□ -0.33
LRAT-201ENST00000336356 MED14O60244 1454 aa13.02□□□□□ -0.33
LRAT-201ENST00000336356 CCDC27Q2M243 656 aa13.02□□□□□ -0.33
LRAT-201ENST00000336356 TBC1D9Q6ZT07 1266 aa13.02□□□□□ -0.33
LRAT-201ENST00000336356 PTCD1O75127 700 aaKnown RBP13.01□□□□□ -0.33
LRAT-201ENST00000336356 KRT85P78386 507 aa13.01□□□□□ -0.33
LRAT-201ENST00000336356 MAPK8IP2Q13387 824 aaPredicted RBP13.01□□□□□ -0.33
LRAT-201ENST00000336356 KIF18AQ8NI77 898 aa13.01□□□□□ -0.33
LRAT-201ENST00000336356 ERCC4Q92889 916 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms