RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 GIGYF1O75420 1035 aaPredicted RBP23.63■■□□□ 1.37
CMTM1-204ENST00000336328 CANXP27824 592 aaKnown RBP23.63■■□□□ 1.37
CMTM1-204ENST00000336328 C10orf71Q711Q0 1435 aa23.63■■□□□ 1.37
CMTM1-204ENST00000336328 ZNF496Q96IT1 587 aaPredicted RBP23.63■■□□□ 1.37
CMTM1-204ENST00000336328 WWC3Q9ULE0 1092 aa23.63■■□□□ 1.37
CMTM1-204ENST00000336328 BCS1LQ9Y276 419 aa23.63■■□□□ 1.37
CMTM1-204ENST00000336328 ZBTB1Q9Y2K1 713 aa23.63■■□□□ 1.37
CMTM1-204ENST00000336328 GOLGB1Q14789 3259 aaKnown RBP23.63■■□□□ 1.37
CMTM1-204ENST00000336328 DPEP1P16444 411 aa23.62■■□□□ 1.37
CMTM1-204ENST00000336328 C1QTNF8P60827 252 aa23.62■■□□□ 1.37
CMTM1-204ENST00000336328 PNNQ9H307 717 aaKnown RBP23.62■■□□□ 1.37
CMTM1-204ENST00000336328 PIM2Q9P1W9 311 aa23.62■■□□□ 1.37
CMTM1-204ENST00000336328 CEMIPQ8WUJ3 1361 aa23.62■■□□□ 1.37
CMTM1-204ENST00000336328 HEG1Q9ULI3 1381 aa23.62■■□□□ 1.37
CMTM1-204ENST00000336328 COL15A1P39059 1388 aa23.61■■□□□ 1.37
CMTM1-204ENST00000336328 PXDNLA1KZ92 1463 aa23.61■■□□□ 1.37
CMTM1-204ENST00000336328 POLRMTO00411 1230 aaKnown RBP23.59■■□□□ 1.37
CMTM1-204ENST00000336328 EIF5P55010 431 aaKnown RBP23.59■■□□□ 1.37
CMTM1-204ENST00000336328 DDR1Q08345 913 aa23.59■■□□□ 1.37
CMTM1-204ENST00000336328 UBR2Q8IWV8 1755 aa23.58■■□□□ 1.37
CMTM1-204ENST00000336328 GPBP1L1Q9HC44 474 aaPredicted RBP23.58■■□□□ 1.37
CMTM1-204ENST00000336328 IL6STP40189 918 aaPredicted RBP23.57■■□□□ 1.36
CMTM1-204ENST00000336328 ARHGAP27Q6ZUM4 889 aa23.57■■□□□ 1.36
CMTM1-204ENST00000336328 N4BP2Q86UW6 1770 aaPredicted RBP23.57■■□□□ 1.36
CMTM1-204ENST00000336328 NFIXQ14938 502 aa23.56■■□□□ 1.36
CMTM1-204ENST00000336328 DALRD3Q5D0E6 543 aaKnown RBP23.56■■□□□ 1.36
CMTM1-204ENST00000336328 ATP10DQ9P241 1426 aa23.56■■□□□ 1.36
CMTM1-204ENST00000336328 KCNA3P22001 575 aa23.55■■□□□ 1.36
CMTM1-204ENST00000336328 SERPINB2P05120 415 aa23.54■■□□□ 1.36
CMTM1-204ENST00000336328 SIPA1L3O60292 1781 aaPredicted RBP23.54■■□□□ 1.36
CMTM1-204ENST00000336328 SNRPA1P09661 255 aaKnown RBP23.53■■□□□ 1.36
CMTM1-204ENST00000336328 RALBP1Q15311 655 aa23.53■■□□□ 1.36
CMTM1-204ENST00000336328 TAF7Q15545 349 aaPredicted RBP23.53■■□□□ 1.36
CMTM1-204ENST00000336328 MCM10Q7L590 875 aa23.53■■□□□ 1.36
CMTM1-204ENST00000336328 BCL2L12Q9HB09 334 aa23.53■■□□□ 1.36
CMTM1-204ENST00000336328 ZNF330Q9Y3S2 320 aaPredicted RBP23.52■■□□□ 1.36
CMTM1-204ENST00000336328 ADCY9O60503 1353 aa23.52■■□□□ 1.36
CMTM1-204ENST00000336328 KIAA1551Q9HCM1 1747 aa23.51■■□□□ 1.35
CMTM1-204ENST00000336328 A1BGP04217 495 aa23.51■■□□□ 1.35
CMTM1-204ENST00000336328 PNISRQ8TF01 805 aaKnown RBP23.51■■□□□ 1.35
CMTM1-204ENST00000336328 PDZRN3Q9UPQ7 1066 aa23.51■■□□□ 1.35
CMTM1-204ENST00000336328 KCNQ3O43525 872 aa23.5■■□□□ 1.35
CMTM1-204ENST00000336328 TBC1D2BQ9UPU7 963 aa23.5■■□□□ 1.35
CMTM1-204ENST00000336328 USP16Q9Y5T5 823 aa23.49■■□□□ 1.35
CMTM1-204ENST00000336328 SENP3-EIF4A1A0A087X0R7 540 aa23.48■■□□□ 1.35
CMTM1-204ENST00000336328 CHRNA5P30532 468 aa23.48■■□□□ 1.35
CMTM1-204ENST00000336328 DCTN1Q14203 1278 aa23.48■■□□□ 1.35
CMTM1-204ENST00000336328 BICDL1Q6ZP65 573 aa23.48■■□□□ 1.35
CMTM1-204ENST00000336328 ZNF526Q8TF50 670 aaPredicted RBP23.48■■□□□ 1.35
CMTM1-204ENST00000336328 H0YIN7 160 aa23.47■■□□□ 1.35
CMTM1-204ENST00000336328 SETDB2Q96T68 719 aa23.47■■□□□ 1.35
CMTM1-204ENST00000336328 MAPK8IP3Q9UPT6 1336 aa23.47■■□□□ 1.35
CMTM1-204ENST00000336328 BRCA1P38398 1863 aaKnown RBP23.47■■□□□ 1.35
CMTM1-204ENST00000336328 PLEKHF1Q96S99 279 aa23.46■■□□□ 1.35
CMTM1-204ENST00000336328 ARFGEF1Q9Y6D6 1849 aa23.46■■□□□ 1.35
CMTM1-204ENST00000336328 PDE6BP35913 854 aa23.45■■□□□ 1.34
CMTM1-204ENST00000336328 NFE2L2Q16236 605 aa23.45■■□□□ 1.34
CMTM1-204ENST00000336328 TBC1D9BQ66K14 1250 aa23.45■■□□□ 1.34
CMTM1-204ENST00000336328 CLEC4GQ6UXB4 293 aa23.45■■□□□ 1.34
CMTM1-204ENST00000336328 DZIP3Q86Y13 1208 aaKnown RBP23.45■■□□□ 1.34
CMTM1-204ENST00000336328 TTLL6Q8N841 843 aa23.45■■□□□ 1.34
CMTM1-204ENST00000336328 AFDNP55196 1824 aaKnown RBP23.45■■□□□ 1.34
CMTM1-204ENST00000336328 BRIP1Q9BX63 1249 aa23.44■■□□□ 1.34
CMTM1-204ENST00000336328 ZNF652Q9Y2D9 606 aa23.44■■□□□ 1.34
CMTM1-204ENST00000336328 NPHP1O15259 732 aa23.43■■□□□ 1.34
CMTM1-204ENST00000336328 DDX10Q13206 875 aaKnown RBP23.43■■□□□ 1.34
CMTM1-204ENST00000336328 C2CD5Q86YS7 1000 aa23.43■■□□□ 1.34
CMTM1-204ENST00000336328 NRXN2Q9P2S2 1712 aa23.42■■□□□ 1.34
CMTM1-204ENST00000336328 CARMIL3Q8ND23 1372 aa23.42■■□□□ 1.34
CMTM1-204ENST00000336328 RGL2O15211 777 aa23.42■■□□□ 1.34
CMTM1-204ENST00000336328 CAMTA2O94983 1202 aa23.42■■□□□ 1.34
CMTM1-204ENST00000336328 C9orf131Q5VYM1 1079 aa23.42■■□□□ 1.34
CMTM1-204ENST00000336328 MIS18AQ9NYP9 233 aa23.4■■□□□ 1.34
CMTM1-204ENST00000336328 PRAMEF22A3QJZ6 481 aa23.39■■□□□ 1.33
CMTM1-204ENST00000336328 ST5P78524 1137 aa23.39■■□□□ 1.33
CMTM1-204ENST00000336328 PRR5LQ6MZQ0 368 aa23.38■■□□□ 1.33
CMTM1-204ENST00000336328 CNBD1Q8NA66 436 aa23.38■■□□□ 1.33
CMTM1-204ENST00000336328 ZNF622Q969S3 477 aaKnown RBP eCLIP23.37■■□□□ 1.33
CMTM1-204ENST00000336328 RNF181Q9P0P0 153 aa23.37■■□□□ 1.33
CMTM1-204ENST00000336328 DLG5Q8TDM6 1919 aa23.37■■□□□ 1.33
CMTM1-204ENST00000336328 KDM2BQ8NHM5 1336 aa23.36■■□□□ 1.33
CMTM1-204ENST00000336328 MYBBP1AQ9BQG0 1328 aaKnown RBP23.36■■□□□ 1.33
CMTM1-204ENST00000336328 PIP4K2AP48426 406 aaPredicted RBP23.36■■□□□ 1.33
CMTM1-204ENST00000336328 LMOD3Q0VAK6 560 aa23.36■■□□□ 1.33
CMTM1-204ENST00000336328 TPTE2Q6XPS3 522 aa23.36■■□□□ 1.33
CMTM1-204ENST00000336328 NBPF26B4DH59 902 aa23.35■■□□□ 1.33
CMTM1-204ENST00000336328 KIF3CO14782 793 aa23.35■■□□□ 1.33
CMTM1-204ENST00000336328 RIPK4P57078 832 aa23.35■■□□□ 1.33
CMTM1-204ENST00000336328 EIF4A1P60842 406 aaKnown RBP23.35■■□□□ 1.33
CMTM1-204ENST00000336328 NBPF10Q6P3W6 841 aaKnown RBP23.35■■□□□ 1.33
CMTM1-204ENST00000336328 NBPF15Q8N660 670 aa23.35■■□□□ 1.33
CMTM1-204ENST00000336328 SCN7AQ01118 1682 aa23.35■■□□□ 1.33
CMTM1-204ENST00000336328 NBPF5PQ86XG9 351 aaPredicted RBP23.34■■□□□ 1.33
CMTM1-204ENST00000336328 CNKSR1Q969H4 720 aa23.34■■□□□ 1.33
CMTM1-204ENST00000336328 BABAM1Q9NWV8 329 aa23.34■■□□□ 1.33
CMTM1-204ENST00000336328 ZC3H4Q9UPT8 1303 aaKnown RBP23.33■■□□□ 1.33
CMTM1-204ENST00000336328 TOMM70O94826 608 aa23.33■■□□□ 1.33
CMTM1-204ENST00000336328 LMNB1P20700 586 aa23.33■■□□□ 1.33
CMTM1-204ENST00000336328 STYK1Q6J9G0 422 aa23.32■■□□□ 1.32
CMTM1-204ENST00000336328 NIP7Q9Y221 180 aaKnown RBP eCLIP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms