RNA–Protein interactions for RNA: ENST00000335574.9

HM13-201, Transcript of histocompatibility minor 13, humanhuman

TSL 1 (best) BASIC

Gene HM13, Length 1,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-201ENST00000335574 EXOC6BQ9Y2D4 811 aa18.73■□□□□ 0.59
HM13-201ENST00000335574 LAMB4A4D0S4 1761 aa18.72■□□□□ 0.59
HM13-201ENST00000335574 PRAMEF22A3QJZ6 481 aa18.72■□□□□ 0.59
HM13-201ENST00000335574 PROSER3Q2NL68 480 aa18.72■□□□□ 0.59
HM13-201ENST00000335574 SSH3Q8TE77 659 aa18.72■□□□□ 0.59
HM13-201ENST00000335574 HSP90AB1P08238 724 aaKnown RBP18.72■□□□□ 0.59
HM13-201ENST00000335574 NFATC2IPQ8NCF5 419 aa18.72■□□□□ 0.59
HM13-201ENST00000335574 PRDM11Q9NQV5 511 aa18.72■□□□□ 0.59
HM13-201ENST00000335574 DDX21Q9NR30 783 aaKnown RBP eCLIP18.72■□□□□ 0.59
HM13-201ENST00000335574 WDR17Q8IZU2 1322 aa18.72■□□□□ 0.59
HM13-201ENST00000335574 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
HM13-201ENST00000335574 SHANK3Q9BYB0 1731 aa18.71■□□□□ 0.59
HM13-201ENST00000335574 POLA2Q14181 598 aa18.71■□□□□ 0.59
HM13-201ENST00000335574 KSR2Q6VAB6 950 aa18.71■□□□□ 0.59
HM13-201ENST00000335574 LRRCC1Q9C099 1032 aa18.71■□□□□ 0.59
HM13-201ENST00000335574 SALL3Q9BXA9 1300 aa18.71■□□□□ 0.59
HM13-201ENST00000335574 ALDH1L1O75891 902 aa18.7■□□□□ 0.58
HM13-201ENST00000335574 SLC39A6Q13433 755 aa18.7■□□□□ 0.58
HM13-201ENST00000335574 SDSP20132 328 aa18.7■□□□□ 0.58
HM13-201ENST00000335574 PDE1AP54750 535 aa18.7■□□□□ 0.58
HM13-201ENST00000335574 PDIA6Q15084 440 aa18.7■□□□□ 0.58
HM13-201ENST00000335574 GLI3P10071 1580 aa18.69■□□□□ 0.58
HM13-201ENST00000335574 NBPF7P0C2Y1 421 aaPredicted RBP18.69■□□□□ 0.58
HM13-201ENST00000335574 MAP3K2Q9Y2U5 619 aa18.69■□□□□ 0.58
HM13-201ENST00000335574 UBR2Q8IWV8 1755 aa18.68■□□□□ 0.58
HM13-201ENST00000335574 BCL11AQ9H165 835 aa18.68■□□□□ 0.58
HM13-201ENST00000335574 AK9Q5TCS8 1911 aa18.68■□□□□ 0.58
HM13-201ENST00000335574 NFKBIBQ15653 356 aa18.67■□□□□ 0.58
HM13-201ENST00000335574 PPP1R42Q7Z4L9 355 aa18.67■□□□□ 0.58
HM13-201ENST00000335574 ANTXR1Q9H6X2 564 aa18.67■□□□□ 0.58
HM13-201ENST00000335574 KIF2CQ99661 725 aa18.67■□□□□ 0.58
HM13-201ENST00000335574 RAB11FIP3O75154 756 aa18.66■□□□□ 0.58
HM13-201ENST00000335574 DDX58O95786 925 aaKnown RBP18.66■□□□□ 0.58
HM13-201ENST00000335574 SNX21Q969T3 373 aa18.66■□□□□ 0.58
HM13-201ENST00000335574 ZNF496Q96IT1 587 aaPredicted RBP18.66■□□□□ 0.58
HM13-201ENST00000335574 PAPPAQ13219 1627 aa18.66■□□□□ 0.58
HM13-201ENST00000335574 TOM1L2Q6ZVM7 507 aa18.65■□□□□ 0.58
HM13-201ENST00000335574 STAP2Q9UGK3 403 aa18.65■□□□□ 0.58
HM13-201ENST00000335574 AFDNP55196 1824 aaKnown RBP18.65■□□□□ 0.58
HM13-201ENST00000335574 MTX1Q13505 466 aa18.65■□□□□ 0.58
HM13-201ENST00000335574 CARD10Q9BWT7 1032 aa18.65■□□□□ 0.58
HM13-201ENST00000335574 PCDH11XQ9BZA7 1347 aa18.64■□□□□ 0.57
HM13-201ENST00000335574 PCDH11YQ9BZA8 1340 aa18.64■□□□□ 0.57
HM13-201ENST00000335574 SNRPA1P09661 255 aaKnown RBP18.64■□□□□ 0.57
HM13-201ENST00000335574 MX1P20591 662 aa18.64■□□□□ 0.57
HM13-201ENST00000335574 CASC1Q6TDU7 716 aa18.64■□□□□ 0.57
HM13-201ENST00000335574 TTC5Q8N0Z6 440 aa18.64■□□□□ 0.57
HM13-201ENST00000335574 LINS1Q8NG48 757 aa18.64■□□□□ 0.57
HM13-201ENST00000335574 HDAC5Q9UQL6 1122 aa18.64■□□□□ 0.57
HM13-201ENST00000335574 ARFGEF2Q9Y6D5 1785 aa18.64■□□□□ 0.57
HM13-201ENST00000335574 AOX1Q06278 1338 aa18.64■□□□□ 0.57
HM13-201ENST00000335574 SRGAP3O43295 1099 aa18.63■□□□□ 0.57
HM13-201ENST00000335574 CABP4P57796 275 aa18.63■□□□□ 0.57
HM13-201ENST00000335574 HSCBQ8IWL3 235 aa18.63■□□□□ 0.57
HM13-201ENST00000335574 ZCRB1Q8TBF4 217 aaKnown RBP18.63■□□□□ 0.57
HM13-201ENST00000335574 FMNL2Q96PY5 1086 aa18.63■□□□□ 0.57
HM13-201ENST00000335574 UTYO14607 1347 aa18.63■□□□□ 0.57
HM13-201ENST00000335574 SURF6O75683 361 aaKnown RBP18.63■□□□□ 0.57
HM13-201ENST00000335574 SLKQ9H2G2 1235 aaPredicted RBP18.63■□□□□ 0.57
HM13-201ENST00000335574 C9orf78Q9NZ63 289 aaPredicted RBP18.62■□□□□ 0.57
HM13-201ENST00000335574 NKX1-1Q15270 411 aaPredicted RBP18.61■□□□□ 0.57
HM13-201ENST00000335574 CWF19L2Q2TBE0 894 aaKnown RBP18.61■□□□□ 0.57
HM13-201ENST00000335574 LRP10Q7Z4F1 713 aa18.61■□□□□ 0.57
HM13-201ENST00000335574 USP26Q9BXU7 913 aa18.61■□□□□ 0.57
HM13-201ENST00000335574 IL2RBP14784 551 aa18.6■□□□□ 0.57
HM13-201ENST00000335574 AIMP1Q12904 312 aaKnown RBP18.6■□□□□ 0.57
HM13-201ENST00000335574 HSP90AB4PQ58FF6 505 aa18.6■□□□□ 0.57
HM13-201ENST00000335574 LARP1Q6PKG0 1096 aaKnown RBP18.6■□□□□ 0.57
HM13-201ENST00000335574 RHPN1Q8TCX5 695 aa18.6■□□□□ 0.57
HM13-201ENST00000335574 USP16Q9Y5T5 823 aa18.6■□□□□ 0.57
HM13-201ENST00000335574 XAGE3Q8WTP9 111 aa18.6■□□□□ 0.57
HM13-201ENST00000335574 KIF1BPQ96EK5 621 aa18.6■□□□□ 0.57
HM13-201ENST00000335574 TOGARAM1Q9Y4F4 1720 aa18.59■□□□□ 0.57
HM13-201ENST00000335574 ERVV-2B6SEH9 535 aa18.59■□□□□ 0.57
HM13-201ENST00000335574 GRM8O00222 908 aa18.59■□□□□ 0.57
HM13-201ENST00000335574 MYL6BP14649 208 aa18.59■□□□□ 0.57
HM13-201ENST00000335574 RIC3Q7Z5B4 369 aa18.59■□□□□ 0.57
HM13-201ENST00000335574 TSHZ3Q63HK5 1081 aa18.58■□□□□ 0.57
HM13-201ENST00000335574 IL1RAPL2Q9NP60 686 aa18.58■□□□□ 0.57
HM13-201ENST00000335574 COL14A1Q05707 1796 aaKnown RBP18.58■□□□□ 0.57
HM13-201ENST00000335574 ROBO1Q9Y6N7 1651 aa18.58■□□□□ 0.57
HM13-201ENST00000335574 KCPQ6ZWJ8 1503 aa18.58■□□□□ 0.56
HM13-201ENST00000335574 ERC2O15083 957 aa18.58■□□□□ 0.56
HM13-201ENST00000335574 REC8O95072 547 aa18.58■□□□□ 0.56
HM13-201ENST00000335574 IGKV5-2P06315 115 aa18.58■□□□□ 0.56
HM13-201ENST00000335574 COPS6Q7L5N1 327 aa18.58■□□□□ 0.56
HM13-201ENST00000335574 COL22A1Q8NFW1 1626 aaPredicted RBP18.57■□□□□ 0.56
HM13-201ENST00000335574 FRAT2O75474 233 aaPredicted RBP18.57■□□□□ 0.56
HM13-201ENST00000335574 DEKP35659 375 aaKnown RBP18.57■□□□□ 0.56
HM13-201ENST00000335574 METTL22Q9BUU2 404 aaPredicted RBP18.57■□□□□ 0.56
HM13-201ENST00000335574 NUP188Q5SRE5 1749 aa18.57■□□□□ 0.56
HM13-201ENST00000335574 EVA1CP58658 441 aa18.56■□□□□ 0.56
HM13-201ENST00000335574 NEXNQ0ZGT2 675 aa18.56■□□□□ 0.56
HM13-201ENST00000335574 STRN4Q9NRL3 753 aa18.56■□□□□ 0.56
HM13-201ENST00000335574 NEURL1BA8MQ27 555 aa18.56■□□□□ 0.56
HM13-201ENST00000335574 KAZALD1Q96I82 304 aa18.56■□□□□ 0.56
HM13-201ENST00000335574 SUCLG2Q96I99 432 aa18.56■□□□□ 0.56
HM13-201ENST00000335574 AHDC1Q5TGY3 1603 aaPredicted RBP18.56■□□□□ 0.56
HM13-201ENST00000335574 ERBB4Q15303 1308 aa18.55■□□□□ 0.56
HM13-201ENST00000335574 ANKRD13DQ6ZTN6 518 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms