RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 ADAMTS7Q9UKP4 1686 aa11.24□□□□□ -0.61
TREM1-202ENST00000334475 CAMKK2Q96RR4 588 aa11.23□□□□□ -0.61
TREM1-202ENST00000334475 SPATA31A5Q5VU36 1347 aa11.23□□□□□ -0.61
TREM1-202ENST00000334475 SPATA31A7Q8IWB4 1347 aa11.23□□□□□ -0.61
TREM1-202ENST00000334475 CEMIPQ8WUJ3 1361 aa11.23□□□□□ -0.61
TREM1-202ENST00000334475 SIPA1L3O60292 1781 aaPredicted RBP11.22□□□□□ -0.61
TREM1-202ENST00000334475 NUTM2GQ5VZR2 741 aa11.22□□□□□ -0.61
TREM1-202ENST00000334475 ARHGEF25Q86VW2 580 aa11.22□□□□□ -0.61
TREM1-202ENST00000334475 CHD1LQ86WJ1 897 aa11.22□□□□□ -0.61
TREM1-202ENST00000334475 RPAP2Q8IXW5 612 aaPredicted RBP11.22□□□□□ -0.61
TREM1-202ENST00000334475 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
TREM1-202ENST00000334475 COL14A1Q05707 1796 aaKnown RBP11.21□□□□□ -0.61
TREM1-202ENST00000334475 DISP2A7MBM2 1401 aa11.21□□□□□ -0.61
TREM1-202ENST00000334475 ATP10DQ9P241 1426 aa11.21□□□□□ -0.61
TREM1-202ENST00000334475 HOXB7P09629 217 aa11.21□□□□□ -0.61
TREM1-202ENST00000334475 CCT4P50991 539 aaKnown RBP11.21□□□□□ -0.61
TREM1-202ENST00000334475 SF3B2Q13435 895 aaKnown RBP11.21□□□□□ -0.61
TREM1-202ENST00000334475 TAF7Q15545 349 aaPredicted RBP11.21□□□□□ -0.61
TREM1-202ENST00000334475 AMOTQ4VCS5 1084 aa11.21□□□□□ -0.61
TREM1-202ENST00000334475 CCDC30Q5VVM6 783 aa11.21□□□□□ -0.61
TREM1-202ENST00000334475 STK31Q9BXU1 1019 aa11.21□□□□□ -0.61
TREM1-202ENST00000334475 BAG6P46379 1132 aa11.2□□□□□ -0.62
TREM1-202ENST00000334475 BECN1Q14457 450 aa11.2□□□□□ -0.62
TREM1-202ENST00000334475 CHRNA2Q15822 529 aa11.2□□□□□ -0.62
TREM1-202ENST00000334475 PLEKHO1Q53GL0 409 aaPredicted RBP11.2□□□□□ -0.62
TREM1-202ENST00000334475 COL18A1P39060 1754 aa11.2□□□□□ -0.62
TREM1-202ENST00000334475 RGPD5Q99666 1765 aa11.2□□□□□ -0.62
TREM1-202ENST00000334475 A0A0G2JS52 829 aa11.19□□□□□ -0.62
TREM1-202ENST00000334475 TRIM37O94972 964 aa11.19□□□□□ -0.62
TREM1-202ENST00000334475 GCP02774 474 aa11.19□□□□□ -0.62
TREM1-202ENST00000334475 CLCN6P51797 869 aa11.19□□□□□ -0.62
TREM1-202ENST00000334475 BMP2KLQ5H9B9 411 aa11.19□□□□□ -0.62
TREM1-202ENST00000334475 AKAP4Q5JQC9 854 aa11.19□□□□□ -0.62
TREM1-202ENST00000334475 ANKRD44Q8N8A2 993 aa11.19□□□□□ -0.62
TREM1-202ENST00000334475 USP35Q9P2H5 1018 aa11.19□□□□□ -0.62
TREM1-202ENST00000334475 NUP188Q5SRE5 1749 aa11.18□□□□□ -0.62
TREM1-202ENST00000334475 RREB1Q92766 1687 aa11.18□□□□□ -0.62
TREM1-202ENST00000334475 HMMRO75330 724 aa11.18□□□□□ -0.62
TREM1-202ENST00000334475 GABBR2O75899 941 aa11.18□□□□□ -0.62
TREM1-202ENST00000334475 KRT24Q2M2I5 525 aa11.18□□□□□ -0.62
TREM1-202ENST00000334475 IL17REQ8NFR9 667 aa11.18□□□□□ -0.62
TREM1-202ENST00000334475 LTV1Q96GA3 475 aaPredicted RBP11.18□□□□□ -0.62
TREM1-202ENST00000334475 TBC1D32Q96NH3 1257 aa11.18□□□□□ -0.62
TREM1-202ENST00000334475 DCTPP1Q9H773 170 aa11.18□□□□□ -0.62
TREM1-202ENST00000334475 SCN11AQ9UI33 1791 aa11.18□□□□□ -0.62
TREM1-202ENST00000334475 SPATA31A1Q5TZJ5 1347 aa11.17□□□□□ -0.62
TREM1-202ENST00000334475 NBPF6Q5VWK0 638 aa11.17□□□□□ -0.62
TREM1-202ENST00000334475 ZNF579Q8NAF0 562 aaKnown RBP11.17□□□□□ -0.62
TREM1-202ENST00000334475 NBPF4Q96M43 638 aa11.17□□□□□ -0.62
TREM1-202ENST00000334475 FBXO3Q9UK99 471 aa11.17□□□□□ -0.62
TREM1-202ENST00000334475 PKD1L3Q7Z443 1732 aa11.16□□□□□ -0.62
TREM1-202ENST00000334475 RTL5Q5HYW3 569 aaPredicted RBP11.16□□□□□ -0.62
TREM1-202ENST00000334475 PTF1AQ7RTS3 328 aa11.16□□□□□ -0.62
TREM1-202ENST00000334475 SIRT2Q8IXJ6 389 aa11.16□□□□□ -0.62
TREM1-202ENST00000334475 LNPKQ9C0E8 428 aa11.16□□□□□ -0.62
TREM1-202ENST00000334475 PARP4Q9UKK3 1724 aaKnown RBP11.15□□□□□ -0.62
TREM1-202ENST00000334475 SEC24BO95487 1268 aa11.15□□□□□ -0.62
TREM1-202ENST00000334475 GNAI3P08754 354 aa11.15□□□□□ -0.62
TREM1-202ENST00000334475 ANKRD45Q5TZF3 282 aa11.15□□□□□ -0.62
TREM1-202ENST00000334475 CEP85Q6P2H3 762 aa11.15□□□□□ -0.62
TREM1-202ENST00000334475 ANKRD24Q8TF21 1146 aa11.15□□□□□ -0.62
TREM1-202ENST00000334475 PDGFDQ9GZP0 370 aaPredicted RBP11.15□□□□□ -0.62
TREM1-202ENST00000334475 C1orf115Q9H7X2 142 aa11.15□□□□□ -0.62
TREM1-202ENST00000334475 FLIIQ13045 1269 aa11.14□□□□□ -0.63
TREM1-202ENST00000334475 C1orf141Q5JVX7 400 aa11.14□□□□□ -0.63
TREM1-202ENST00000334475 ZNF530Q6P9A1 599 aaPredicted RBP11.14□□□□□ -0.63
TREM1-202ENST00000334475 PLCD3Q8N3E9 789 aa11.14□□□□□ -0.63
TREM1-202ENST00000334475 USHBP1Q8N6Y0 703 aa11.14□□□□□ -0.63
TREM1-202ENST00000334475 MIS18AQ9NYP9 233 aa11.14□□□□□ -0.63
TREM1-202ENST00000334475 UTRNP46939 3433 aa11.13□□□□□ -0.63
TREM1-202ENST00000334475 ERBB3P21860 1342 aa11.13□□□□□ -0.63
TREM1-202ENST00000334475 APBA3O96018 575 aa11.13□□□□□ -0.63
TREM1-202ENST00000334475 ZC3H6P61129 1189 aaKnown RBP11.13□□□□□ -0.63
TREM1-202ENST00000334475 TEFQ10587 303 aa11.13□□□□□ -0.63
TREM1-202ENST00000334475 G2E3Q7L622 706 aa11.13□□□□□ -0.63
TREM1-202ENST00000334475 STRN4Q9NRL3 753 aa11.13□□□□□ -0.63
TREM1-202ENST00000334475 CPDO75976 1380 aa11.13□□□□□ -0.63
TREM1-202ENST00000334475 TUBGCP6Q96RT7 1819 aa11.12□□□□□ -0.63
TREM1-202ENST00000334475 RNMTO43148 476 aaKnown RBP11.12□□□□□ -0.63
TREM1-202ENST00000334475 GNAI2P04899 355 aa11.12□□□□□ -0.63
TREM1-202ENST00000334475 EIF4A1P60842 406 aaKnown RBP11.12□□□□□ -0.63
TREM1-202ENST00000334475 HDGFL1Q5TGJ6 251 aa11.12□□□□□ -0.63
TREM1-202ENST00000334475 LARP1Q6PKG0 1096 aaKnown RBP11.12□□□□□ -0.63
TREM1-202ENST00000334475 MEIS3Q99687 375 aa11.12□□□□□ -0.63
TREM1-202ENST00000334475 C22orf23Q9BZE7 217 aa11.12□□□□□ -0.63
TREM1-202ENST00000334475 PRDM11Q9NQV5 511 aa11.12□□□□□ -0.63
TREM1-202ENST00000334475 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.12□□□□□ -0.63
TREM1-202ENST00000334475 MRC1P22897 1456 aa11.12□□□□□ -0.63
TREM1-202ENST00000334475 CDC45O75419 566 aa11.11□□□□□ -0.63
TREM1-202ENST00000334475 RBM25P49756 843 aaKnown RBP11.11□□□□□ -0.63
TREM1-202ENST00000334475 FKBP5Q13451 457 aaPredicted RBP11.11□□□□□ -0.63
TREM1-202ENST00000334475 IBTKQ9P2D0 1353 aaPredicted RBP11.11□□□□□ -0.63
TREM1-202ENST00000334475 HEG1Q9ULI3 1381 aa11.11□□□□□ -0.63
TREM1-202ENST00000334475 ZBTB7CA1YPR0 619 aa11.1□□□□□ -0.63
TREM1-202ENST00000334475 YY1P25490 414 aa11.1□□□□□ -0.63
TREM1-202ENST00000334475 FAM196AQ6ZSG2 479 aa11.1□□□□□ -0.63
TREM1-202ENST00000334475 ANO8Q9HCE9 1232 aaPredicted RBP11.1□□□□□ -0.63
TREM1-202ENST00000334475 LAMB4A4D0S4 1761 aa11.1□□□□□ -0.63
TREM1-202ENST00000334475 BTBD11A6QL63 1104 aa11.09□□□□□ -0.63
TREM1-202ENST00000334475 MFAP1P55081 439 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms