RNA–Protein interactions for RNA: ENST00000333722.9

C12orf56-201, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best) BASIC

Gene C12orf56, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-201ENST00000333722 KDM4AO75164 1064 aa15.85■□□□□ 0.13
C12orf56-201ENST00000333722 IFNL2Q8IZJ0 200 aa15.85■□□□□ 0.13
C12orf56-201ENST00000333722 TCEANC2Q96MN5 208 aa15.85■□□□□ 0.13
C12orf56-201ENST00000333722 NDUFB9Q9Y6M9 179 aa15.85■□□□□ 0.13
C12orf56-201ENST00000333722 STK3Q13188 491 aa15.84■□□□□ 0.13
C12orf56-201ENST00000333722 CHAMP1Q96JM3 812 aa15.84■□□□□ 0.13
C12orf56-201ENST00000333722 IQSEC2Q5JU85 1478 aa15.84■□□□□ 0.13
C12orf56-201ENST00000333722 CDK12Q9NYV4 1490 aaPredicted RBP15.84■□□□□ 0.13
C12orf56-201ENST00000333722 ZGPATQ8N5A5 531 aaKnown RBP15.84■□□□□ 0.13
C12orf56-201ENST00000333722 RNF214Q8ND24 703 aa15.84■□□□□ 0.13
C12orf56-201ENST00000333722 CPA1P15085 419 aa15.83■□□□□ 0.13
C12orf56-201ENST00000333722 GPTP24298 496 aa15.83■□□□□ 0.13
C12orf56-201ENST00000333722 GDPD2Q9HCC8 539 aa15.83■□□□□ 0.13
C12orf56-201ENST00000333722 ZKSCAN1P17029 563 aaPredicted RBP15.83■□□□□ 0.12
C12orf56-201ENST00000333722 RUFY2Q8WXA3 655 aa15.83■□□□□ 0.12
C12orf56-201ENST00000333722 ZNF496Q96IT1 587 aaPredicted RBP15.83■□□□□ 0.12
C12orf56-201ENST00000333722 RICTORQ6R327 1708 aa15.83■□□□□ 0.12
C12orf56-201ENST00000333722 HTATSF1O43719 755 aaKnown RBP15.83■□□□□ 0.12
C12orf56-201ENST00000333722 ARHGEF10O15013 1369 aa15.83■□□□□ 0.12
C12orf56-201ENST00000333722 GOLGA6L4A6NEF3 574 aa15.82■□□□□ 0.12
C12orf56-201ENST00000333722 MPNDQ8N594 471 aa15.82■□□□□ 0.12
C12orf56-201ENST00000333722 USP16Q9Y5T5 823 aa15.82■□□□□ 0.12
C12orf56-201ENST00000333722 PRPF40BQ6NWY9 871 aaKnown RBP15.82■□□□□ 0.12
C12orf56-201ENST00000333722 ARHGEF28Q8N1W1 1705 aaKnown RBP15.82■□□□□ 0.12
C12orf56-201ENST00000333722 ANKRD13DQ6ZTN6 518 aa15.82■□□□□ 0.12
C12orf56-201ENST00000333722 ARHGEF25Q86VW2 580 aa15.82■□□□□ 0.12
C12orf56-201ENST00000333722 LARP1Q6PKG0 1096 aaKnown RBP15.81■□□□□ 0.12
C12orf56-201ENST00000333722 UNC5CLQ8IV45 518 aa15.81■□□□□ 0.12
C12orf56-201ENST00000333722 ZNF790Q6PG37 636 aa15.81■□□□□ 0.12
C12orf56-201ENST00000333722 KSR2Q6VAB6 950 aa15.81■□□□□ 0.12
C12orf56-201ENST00000333722 JAKMIP1Q96N16 626 aaKnown RBP15.81■□□□□ 0.12
C12orf56-201ENST00000333722 NAP1L5Q96NT1 182 aaPredicted RBP15.81■□□□□ 0.12
C12orf56-201ENST00000333722 HYPKQ9NX55 129 aa15.81■□□□□ 0.12
C12orf56-201ENST00000333722 NPHP3Q7Z494 1330 aa15.8■□□□□ 0.12
C12orf56-201ENST00000333722 GTF2E1P29083 439 aaPredicted RBP15.8■□□□□ 0.12
C12orf56-201ENST00000333722 USP26Q9BXU7 913 aa15.8■□□□□ 0.12
C12orf56-201ENST00000333722 FMNL2Q96PY5 1086 aa15.8■□□□□ 0.12
C12orf56-201ENST00000333722 TMEM94Q12767 1356 aa15.8■□□□□ 0.12
C12orf56-201ENST00000333722 GRM8O00222 908 aa15.79■□□□□ 0.12
C12orf56-201ENST00000333722 NUCB2P80303 420 aa15.79■□□□□ 0.12
C12orf56-201ENST00000333722 FKBP4Q02790 459 aaKnown RBP eCLIP15.79■□□□□ 0.12
C12orf56-201ENST00000333722 WASHC4Q2M389 1173 aa15.79■□□□□ 0.12
C12orf56-201ENST00000333722 STK11IPQ8N1F8 1099 aa15.79■□□□□ 0.12
C12orf56-201ENST00000333722 TOMM22Q9NS69 142 aa15.79■□□□□ 0.12
C12orf56-201ENST00000333722 SMC3Q9UQE7 1217 aa15.79■□□□□ 0.12
C12orf56-201ENST00000333722 CASTP20810 708 aaKnown RBP15.79■□□□□ 0.12
C12orf56-201ENST00000333722 BICC1Q9H694 974 aaKnown RBP15.79■□□□□ 0.12
C12orf56-201ENST00000333722 SNRKQ9NRH2 765 aa15.79■□□□□ 0.12
C12orf56-201ENST00000333722 GIGYF1O75420 1035 aaPredicted RBP15.78■□□□□ 0.12
C12orf56-201ENST00000333722 A1BGP04217 495 aa15.78■□□□□ 0.12
C12orf56-201ENST00000333722 ESYT1Q9BSJ8 1104 aa15.78■□□□□ 0.12
C12orf56-201ENST00000333722 SOS1Q07889 1333 aaPredicted RBP15.78■□□□□ 0.12
C12orf56-201ENST00000333722 KIAA0232Q92628 1395 aa15.78■□□□□ 0.12
C12orf56-201ENST00000333722 APPP05067 770 aa15.78■□□□□ 0.12
C12orf56-201ENST00000333722 SNRPA1P09661 255 aaKnown RBP15.78■□□□□ 0.12
C12orf56-201ENST00000333722 EDC3Q96F86 508 aaKnown RBP15.78■□□□□ 0.12
C12orf56-201ENST00000333722 FIBPO43427 364 aa15.77■□□□□ 0.12
C12orf56-201ENST00000333722 AGLP35573 1532 aa15.77■□□□□ 0.12
C12orf56-201ENST00000333722 GLRX3O76003 335 aaKnown RBP15.77■□□□□ 0.12
C12orf56-201ENST00000333722 FERMT3Q86UX7 667 aa15.77■□□□□ 0.11
C12orf56-201ENST00000333722 ZCRB1Q8TBF4 217 aaKnown RBP15.77■□□□□ 0.11
C12orf56-201ENST00000333722 PANK2Q9BZ23 570 aa15.77■□□□□ 0.11
C12orf56-201ENST00000333722 BRPF1P55201 1214 aaPredicted RBP15.76■□□□□ 0.11
C12orf56-201ENST00000333722 LMBR1LQ6UX01 489 aa15.76■□□□□ 0.11
C12orf56-201ENST00000333722 ECHDC1Q9NTX5 307 aa15.76■□□□□ 0.11
C12orf56-201ENST00000333722 CHMLP26374 656 aa15.76■□□□□ 0.11
C12orf56-201ENST00000333722 PKP1Q13835 747 aa15.76■□□□□ 0.11
C12orf56-201ENST00000333722 SUCLG2Q96I99 432 aa15.76■□□□□ 0.11
C12orf56-201ENST00000333722 TMOD3Q9NYL9 352 aa15.76■□□□□ 0.11
C12orf56-201ENST00000333722 COL3A1P02461 1466 aaPredicted RBP15.76■□□□□ 0.11
C12orf56-201ENST00000333722 RAB11FIP3O75154 756 aa15.75■□□□□ 0.11
C12orf56-201ENST00000333722 RBM25P49756 843 aaKnown RBP15.75■□□□□ 0.11
C12orf56-201ENST00000333722 DDX46Q7L014 1031 aaKnown RBP15.75■□□□□ 0.11
C12orf56-201ENST00000333722 CCDC83Q8IWF9 413 aa15.75■□□□□ 0.11
C12orf56-201ENST00000333722 ERC1Q8IUD2 1116 aa15.75■□□□□ 0.11
C12orf56-201ENST00000333722 TMX3Q96JJ7 454 aa15.75■□□□□ 0.11
C12orf56-201ENST00000333722 PALD1Q9ULE6 856 aa15.75■□□□□ 0.11
C12orf56-201ENST00000333722 LINS1Q8NG48 757 aa15.75■□□□□ 0.11
C12orf56-201ENST00000333722 MED14O60244 1454 aa15.74■□□□□ 0.11
C12orf56-201ENST00000333722 ACSBG1Q96GR2 724 aa15.74■□□□□ 0.11
C12orf56-201ENST00000333722 SPATA31D1Q6ZQQ2 1576 aa15.74■□□□□ 0.11
C12orf56-201ENST00000333722 DDX21Q9NR30 783 aaKnown RBP eCLIP15.74■□□□□ 0.11
C12orf56-201ENST00000333722 CEBPZQ03701 1054 aaKnown RBP15.74■□□□□ 0.11
C12orf56-201ENST00000333722 RBM27Q9P2N5 1060 aaKnown RBP15.74■□□□□ 0.11
C12orf56-201ENST00000333722 BEND3Q5T5X7 828 aa15.73■□□□□ 0.11
C12orf56-201ENST00000333722 NPHP4O75161 1426 aaPredicted RBP15.73■□□□□ 0.11
C12orf56-201ENST00000333722 NECAB1Q8N987 351 aa15.73■□□□□ 0.11
C12orf56-201ENST00000333722 OVOS2A0A0J9YW53 1432 aa15.73■□□□□ 0.11
C12orf56-201ENST00000333722 OVOS2Q6IE36 1432 aa15.73■□□□□ 0.11
C12orf56-201ENST00000333722 LRRC2Q9BYS8 371 aa15.73■□□□□ 0.11
C12orf56-201ENST00000333722 SLC52A2Q9HAB3 445 aa15.73■□□□□ 0.11
C12orf56-201ENST00000333722 MAP2P11137 1827 aaKnown RBP15.72■□□□□ 0.11
C12orf56-201ENST00000333722 CCDC57Q2TAC2 916 aa15.72■□□□□ 0.11
C12orf56-201ENST00000333722 BICDL1Q6ZP65 573 aa15.72■□□□□ 0.11
C12orf56-201ENST00000333722 NEURL4Q96JN8 1562 aa15.72■□□□□ 0.11
C12orf56-201ENST00000333722 BAG4O95429 457 aaKnown RBP15.72■□□□□ 0.11
C12orf56-201ENST00000333722 DNTTIP2Q5QJE6 756 aaKnown RBP15.72■□□□□ 0.11
C12orf56-201ENST00000333722 FBXW7Q969H0 707 aa15.72■□□□□ 0.11
C12orf56-201ENST00000333722 ZNF594Q96JF6 807 aaPredicted RBP15.72■□□□□ 0.11
C12orf56-201ENST00000333722 SKOR2Q2VWA4 1001 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms