RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 LRSAM1Q6UWE0 723 aa11.66□□□□□ -0.54
CSGALNACT1-201ENST00000332246 ARHGAP45Q92619 1136 aa11.66□□□□□ -0.54
CSGALNACT1-201ENST00000332246 TTC21BQ7Z4L5 1316 aa11.65□□□□□ -0.54
CSGALNACT1-201ENST00000332246 IL13P35225 146 aa11.65□□□□□ -0.54
CSGALNACT1-201ENST00000332246 DDX46Q7L014 1031 aaKnown RBP11.65□□□□□ -0.54
CSGALNACT1-201ENST00000332246 GLRX3O76003 335 aaKnown RBP11.65□□□□□ -0.54
CSGALNACT1-201ENST00000332246 STK38Q15208 465 aa11.65□□□□□ -0.54
CSGALNACT1-201ENST00000332246 TRERF1Q96PN7 1200 aa11.65□□□□□ -0.54
CSGALNACT1-201ENST00000332246 AK2P54819 239 aa11.65□□□□□ -0.54
CSGALNACT1-201ENST00000332246 TRDNQ13061 729 aa11.64□□□□□ -0.55
CSGALNACT1-201ENST00000332246 CHMLP26374 656 aa11.64□□□□□ -0.55
CSGALNACT1-201ENST00000332246 MAP3K11Q16584 847 aa11.64□□□□□ -0.55
CSGALNACT1-201ENST00000332246 PLEKHF1Q96S99 279 aa11.64□□□□□ -0.55
CSGALNACT1-201ENST00000332246 NSFL1CQ9UNZ2 370 aaKnown RBP11.64□□□□□ -0.55
CSGALNACT1-201ENST00000332246 UNC5CLQ8IV45 518 aa11.64□□□□□ -0.55
CSGALNACT1-201ENST00000332246 UBE2Q2Q8WVN8 375 aa11.64□□□□□ -0.55
CSGALNACT1-201ENST00000332246 EDC3Q96F86 508 aaKnown RBP11.64□□□□□ -0.55
CSGALNACT1-201ENST00000332246 LMBRD1Q9NUN5 540 aa11.64□□□□□ -0.55
CSGALNACT1-201ENST00000332246 NBPF7P0C2Y1 421 aaPredicted RBP11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 PDCP20941 246 aa11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 HSP90AB3PQ58FF7 597 aa11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 CCDC183Q5T5S1 534 aa11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 UBE3BQ7Z3V4 1068 aa11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 ERCC4Q92889 916 aaPredicted RBP11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 MAP3K19Q56UN5 1328 aa11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 PPIP5K1Q6PFW1 1433 aa11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 POLR3DP05423 398 aaPredicted RBP11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 CHRNA2Q15822 529 aa11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 CCDC144CPQ8IYA2 1237 aa11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 ERBB4Q15303 1308 aa11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 ERICH4A6NGS2 130 aa11.63□□□□□ -0.55
CSGALNACT1-201ENST00000332246 ZBTB3Q9H5J0 574 aa11.62□□□□□ -0.55
CSGALNACT1-201ENST00000332246 LGR6Q9HBX8 967 aa11.62□□□□□ -0.55
CSGALNACT1-201ENST00000332246 ECHDC1Q9NTX5 307 aa11.62□□□□□ -0.55
CSGALNACT1-201ENST00000332246 ERCC6L2Q5T890 1561 aa11.62□□□□□ -0.55
CSGALNACT1-201ENST00000332246 LRRIQ1Q96JM4 1722 aa11.62□□□□□ -0.55
CSGALNACT1-201ENST00000332246 ERVK-7P63135 1459 aa11.62□□□□□ -0.55
CSGALNACT1-201ENST00000332246 ATP8B2P98198 1209 aa11.62□□□□□ -0.55
CSGALNACT1-201ENST00000332246 PROSER2Q86WR7 435 aaPredicted RBP11.62□□□□□ -0.55
CSGALNACT1-201ENST00000332246 DACT1Q9NYF0 836 aa11.62□□□□□ -0.55
CSGALNACT1-201ENST00000332246 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
CSGALNACT1-201ENST00000332246 PTPRCP08575 1304 aa11.62□□□□□ -0.55
CSGALNACT1-201ENST00000332246 KCNQ3O43525 872 aa11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 SYT1P21579 422 aa11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 ZKSCAN5Q9Y2L8 839 aa11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 RAD21O60216 631 aa11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 TRIM29Q14134 588 aa11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 CCDC186Q7Z3E2 898 aa11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 CCDC112Q8NEF3 446 aa11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 BRF1Q92994 677 aa11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 RBM8AQ9Y5S9 174 aaKnown RBP11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 GOLIM4O00461 696 aa11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 ZSCAN22P10073 491 aaPredicted RBP11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 LUZP1Q86V48 1076 aa11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 PDCL2Q8N4E4 241 aa11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 GPT2Q8TD30 523 aa11.61□□□□□ -0.55
CSGALNACT1-201ENST00000332246 NSD2O96028 1365 aa11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 A0A087WZG4 1122 aa11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 CPLX2Q6PUV4 134 aaKnown RBP11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 IDH1O75874 414 aaKnown RBP11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 ZNF165P49910 485 aa11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 NOLC1Q14978 699 aaKnown RBP eCLIP11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 PPP4R3BQ5MIZ7 849 aa11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 MNS1Q8NEH6 495 aa11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 PDCL3Q9H2J4 239 aa11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 TNNT3P45378 269 aaPredicted RBP11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 CABP4P57796 275 aa11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 HMGN5P82970 282 aaKnown RBP11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 AKAP17AQ02040 695 aaKnown RBP11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 CCDC129Q6ZRS4 1044 aa11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 CABLES1Q8TDN4 633 aa11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 FAM227BQ96M60 508 aa11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 DNAJC25Q9H1X3 360 aa11.6□□□□□ -0.55
CSGALNACT1-201ENST00000332246 SAMD9LQ8IVG5 1584 aa11.59□□□□□ -0.55
CSGALNACT1-201ENST00000332246 NPC1L1Q9UHC9 1359 aa11.59□□□□□ -0.55
CSGALNACT1-201ENST00000332246 A0A087WWV3 80 aa11.59□□□□□ -0.55
CSGALNACT1-201ENST00000332246 ATP10AO60312 1499 aa11.59□□□□□ -0.55
CSGALNACT1-201ENST00000332246 SERPINC1P01008 464 aa11.59□□□□□ -0.55
CSGALNACT1-201ENST00000332246 PTGS1P23219 599 aa11.59□□□□□ -0.55
CSGALNACT1-201ENST00000332246 ERC1Q8IUD2 1116 aa11.59□□□□□ -0.55
CSGALNACT1-201ENST00000332246 NUP133Q8WUM0 1156 aa11.59□□□□□ -0.55
CSGALNACT1-201ENST00000332246 TNNT1P13805 278 aa11.58□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ZNF518AQ6AHZ1 1483 aa11.58□□□□□ -0.56
CSGALNACT1-201ENST00000332246 LETM1O95202 739 aaPredicted RBP11.58□□□□□ -0.56
CSGALNACT1-201ENST00000332246 GPTP24298 496 aa11.58□□□□□ -0.56
CSGALNACT1-201ENST00000332246 NMIQ13287 307 aaPredicted RBP11.58□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ANO6Q4KMQ2 910 aa11.58□□□□□ -0.56
CSGALNACT1-201ENST00000332246 COPS6Q7L5N1 327 aa11.58□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CLIP2Q9UDT6 1046 aa11.58□□□□□ -0.56
CSGALNACT1-201ENST00000332246 PPP6R1Q9UPN7 881 aa11.58□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CHL1O00533 1208 aa11.58□□□□□ -0.56
CSGALNACT1-201ENST00000332246 PHF8Q9UPP1 1060 aa11.58□□□□□ -0.56
CSGALNACT1-201ENST00000332246 FSD2A1L4K1 749 aa11.57□□□□□ -0.56
CSGALNACT1-201ENST00000332246 OFD1O75665 1012 aa11.57□□□□□ -0.56
CSGALNACT1-201ENST00000332246 TATP17735 454 aaPredicted RBP11.57□□□□□ -0.56
CSGALNACT1-201ENST00000332246 UBE2HP62256 183 aa11.57□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CNNM1Q9NRU3 951 aa11.57□□□□□ -0.56
CSGALNACT1-201ENST00000332246 DBF4Q9UBU7 674 aaPredicted RBP11.57□□□□□ -0.56
CSGALNACT1-201ENST00000332246 TTC37Q6PGP7 1564 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms