RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 CCDC8Q9H0W5 538 aaPredicted RBP17.35■□□□□ 0.37
SYNGR1-203ENST00000328933 CLEC11AQ9Y240 323 aa17.35■□□□□ 0.37
SYNGR1-203ENST00000328933 KDM4AO75164 1064 aa17.34■□□□□ 0.37
SYNGR1-203ENST00000328933 PER1O15534 1290 aaPredicted RBP17.34■□□□□ 0.37
SYNGR1-203ENST00000328933 A1BGP04217 495 aa17.34■□□□□ 0.37
SYNGR1-203ENST00000328933 CNBD1Q8NA66 436 aa17.34■□□□□ 0.37
SYNGR1-203ENST00000328933 POLR3AO14802 1390 aaPredicted RBP17.34■□□□□ 0.37
SYNGR1-203ENST00000328933 JDP2Q8WYK2 163 aa17.33■□□□□ 0.37
SYNGR1-203ENST00000328933 CDC42BPAQ5VT25 1732 aa17.33■□□□□ 0.37
SYNGR1-203ENST00000328933 PTPRCP08575 1304 aa17.33■□□□□ 0.36
SYNGR1-203ENST00000328933 PTPRMP28827 1452 aa17.33■□□□□ 0.36
SYNGR1-203ENST00000328933 PDE4AP27815 886 aa17.33■□□□□ 0.36
SYNGR1-203ENST00000328933 CRACR2BQ8N4Y2 399 aaPredicted RBP17.33■□□□□ 0.36
SYNGR1-203ENST00000328933 AIDAQ96BJ3 306 aa17.33■□□□□ 0.36
SYNGR1-203ENST00000328933 KSR2Q6VAB6 950 aa17.33■□□□□ 0.36
SYNGR1-203ENST00000328933 RSPH6AQ9H0K4 717 aa17.33■□□□□ 0.36
SYNGR1-203ENST00000328933 BOLA2Q9H3K6 86 aa17.33■□□□□ 0.36
SYNGR1-203ENST00000328933 PTPRTO14522 1441 aa17.32■□□□□ 0.36
SYNGR1-203ENST00000328933 CARD10Q9BWT7 1032 aa17.32■□□□□ 0.36
SYNGR1-203ENST00000328933 ZC3H12CQ9C0D7 883 aaKnown RBP17.32■□□□□ 0.36
SYNGR1-203ENST00000328933 USP5P45974 858 aa17.32■□□□□ 0.36
SYNGR1-203ENST00000328933 FOSBP53539 338 aa17.32■□□□□ 0.36
SYNGR1-203ENST00000328933 IL16Q14005 1332 aa17.32■□□□□ 0.36
SYNGR1-203ENST00000328933 SPATA31E1Q6ZUB1 1445 aa17.32■□□□□ 0.36
SYNGR1-203ENST00000328933 GRM1Q13255 1194 aa17.32■□□□□ 0.36
SYNGR1-203ENST00000328933 LMBR1LQ6UX01 489 aa17.32■□□□□ 0.36
SYNGR1-203ENST00000328933 MSL1Q68DK7 614 aa17.31■□□□□ 0.36
SYNGR1-203ENST00000328933 CCDC24Q8N4L8 307 aa17.31■□□□□ 0.36
SYNGR1-203ENST00000328933 GBP4Q96PP9 640 aa17.31■□□□□ 0.36
SYNGR1-203ENST00000328933 SLC52A2Q9HAB3 445 aa17.31■□□□□ 0.36
SYNGR1-203ENST00000328933 NOP58Q9Y2X3 529 aaKnown RBP17.31■□□□□ 0.36
SYNGR1-203ENST00000328933 TRIM27P14373 513 aa17.31■□□□□ 0.36
SYNGR1-203ENST00000328933 SPATA31A3Q5VYP0 1347 aa17.31■□□□□ 0.36
SYNGR1-203ENST00000328933 WDHD1O75717 1129 aaPredicted RBP17.31■□□□□ 0.36
SYNGR1-203ENST00000328933 SNRKQ9NRH2 765 aa17.31■□□□□ 0.36
SYNGR1-203ENST00000328933 IQSEC3Q9UPP2 1182 aaPredicted RBP17.31■□□□□ 0.36
SYNGR1-203ENST00000328933 ZNF496Q96IT1 587 aaPredicted RBP17.31■□□□□ 0.36
SYNGR1-203ENST00000328933 MAP3K4Q9Y6R4 1608 aa17.3■□□□□ 0.36
SYNGR1-203ENST00000328933 CCDC43Q96MW1 224 aaKnown RBP17.3■□□□□ 0.36
SYNGR1-203ENST00000328933 CCDC87Q9NVE4 849 aa17.3■□□□□ 0.36
SYNGR1-203ENST00000328933 KDM5CP41229 1560 aa17.3■□□□□ 0.36
SYNGR1-203ENST00000328933 KDM4FA0A1W2PPD8 638 aa17.3■□□□□ 0.36
SYNGR1-203ENST00000328933 POLR3DP05423 398 aaPredicted RBP17.29■□□□□ 0.36
SYNGR1-203ENST00000328933 OGFOD1Q8N543 542 aa17.29■□□□□ 0.36
SYNGR1-203ENST00000328933 TRIM44Q96DX7 344 aaPredicted RBP17.29■□□□□ 0.36
SYNGR1-203ENST00000328933 IRS4O14654 1257 aaPredicted RBP17.29■□□□□ 0.36
SYNGR1-203ENST00000328933 MAP3K12Q12852 859 aa17.29■□□□□ 0.36
SYNGR1-203ENST00000328933 CREBRFQ8IUR6 639 aa17.29■□□□□ 0.36
SYNGR1-203ENST00000328933 SAFBQ15424 915 aaKnown RBP eCLIP17.28■□□□□ 0.36
SYNGR1-203ENST00000328933 DDX21Q9NR30 783 aaKnown RBP eCLIP17.28■□□□□ 0.36
SYNGR1-203ENST00000328933 MPHOSPH10O00566 681 aaKnown RBP17.28■□□□□ 0.36
SYNGR1-203ENST00000328933 WDR17Q8IZU2 1322 aa17.28■□□□□ 0.36
SYNGR1-203ENST00000328933 ADGRL3Q9HAR2 1447 aa17.28■□□□□ 0.36
SYNGR1-203ENST00000328933 F8W031 263 aaPredicted RBP17.28■□□□□ 0.36
SYNGR1-203ENST00000328933 GRM8O00222 908 aa17.28■□□□□ 0.36
SYNGR1-203ENST00000328933 SMARCA5O60264 1052 aaPredicted RBP17.28■□□□□ 0.36
SYNGR1-203ENST00000328933 LINS1Q8NG48 757 aa17.28■□□□□ 0.36
SYNGR1-203ENST00000328933 MINDY4BA8MYZ0 360 aa17.27■□□□□ 0.36
SYNGR1-203ENST00000328933 PSMA5P28066 241 aa17.27■□□□□ 0.36
SYNGR1-203ENST00000328933 GPR162Q16538 588 aa17.27■□□□□ 0.36
SYNGR1-203ENST00000328933 CWF19L2Q2TBE0 894 aaKnown RBP17.27■□□□□ 0.36
SYNGR1-203ENST00000328933 TSPYL6Q8N831 410 aa17.27■□□□□ 0.36
SYNGR1-203ENST00000328933 PARD3Q8TEW0 1356 aa17.27■□□□□ 0.35
SYNGR1-203ENST00000328933 PHKG2P15735 406 aa17.26■□□□□ 0.35
SYNGR1-203ENST00000328933 RBM26Q5T8P6 1007 aaKnown RBP17.26■□□□□ 0.35
SYNGR1-203ENST00000328933 CWC27Q6UX04 472 aaKnown RBP17.26■□□□□ 0.35
SYNGR1-203ENST00000328933 CHD1LQ86WJ1 897 aa17.26■□□□□ 0.35
SYNGR1-203ENST00000328933 FAM89AQ96GI7 184 aa17.26■□□□□ 0.35
SYNGR1-203ENST00000328933 ERVV-2B6SEH9 535 aa17.26■□□□□ 0.35
SYNGR1-203ENST00000328933 SLF2Q8IX21 1173 aa17.26■□□□□ 0.35
SYNGR1-203ENST00000328933 VPS37CA5D8V6 355 aaPredicted RBP17.26■□□□□ 0.35
SYNGR1-203ENST00000328933 HELBQ8NG08 1087 aaPredicted RBP17.26■□□□□ 0.35
SYNGR1-203ENST00000328933 NKTRP30414 1462 aaKnown RBP17.25■□□□□ 0.35
SYNGR1-203ENST00000328933 RIMBP2O15034 1052 aa17.25■□□□□ 0.35
SYNGR1-203ENST00000328933 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
SYNGR1-203ENST00000328933 KCNQ4P56696 695 aa17.25■□□□□ 0.35
SYNGR1-203ENST00000328933 RBM6P78332 1123 aaKnown RBP17.25■□□□□ 0.35
SYNGR1-203ENST00000328933 C16orf71Q8IYS4 520 aaPredicted RBP17.25■□□□□ 0.35
SYNGR1-203ENST00000328933 HCLS1P14317 486 aaPredicted RBP17.25■□□□□ 0.35
SYNGR1-203ENST00000328933 PHAXQ9H814 394 aaKnown RBP17.25■□□□□ 0.35
SYNGR1-203ENST00000328933 FAM135BQ49AJ0 1406 aa17.25■□□□□ 0.35
SYNGR1-203ENST00000328933 DIP2BQ9P265 1576 aa17.25■□□□□ 0.35
SYNGR1-203ENST00000328933 RAB11FIP3O75154 756 aa17.25■□□□□ 0.35
SYNGR1-203ENST00000328933 MYO1BO43795 1136 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 LDHCP07864 332 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 ATP2B1P20020 1258 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 NRDCO43847 1150 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 WDR78Q5VTH9 848 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 SH3TC1Q8TE82 1336 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 RBM19Q9Y4C8 960 aaKnown RBP17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 SHROOM2Q13796 1616 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 NUP133Q8WUM0 1156 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 MKNK2Q9HBH9 465 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 PLA2R1Q13018 1463 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 SBNO2Q9Y2G9 1366 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 ERBB3P21860 1342 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 LOC102724428A0A0B4J2F2 783 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 GOLGA6L6A8MZA4 724 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 SIK1P57059 783 aa17.24■□□□□ 0.35
SYNGR1-203ENST00000328933 MEIS3Q99687 375 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms