RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 TTC5Q8N0Z6 440 aa33.74■■■□□ 2.99
PPP4R4-202ENST00000328839 CEP350Q5VT06 3117 aa33.73■■■□□ 2.99
PPP4R4-202ENST00000328839 KIF3CO14782 793 aa33.73■■■□□ 2.99
PPP4R4-202ENST00000328839 TM4SF1P30408 202 aa33.73■■■□□ 2.99
PPP4R4-202ENST00000328839 CHRNA5P30532 468 aa33.73■■■□□ 2.99
PPP4R4-202ENST00000328839 DALRD3Q5D0E6 543 aaKnown RBP33.73■■■□□ 2.99
PPP4R4-202ENST00000328839 HSPA6P17066 643 aa33.72■■■□□ 2.99
PPP4R4-202ENST00000328839 VSIG10Q8N0Z9 540 aa33.72■■■□□ 2.99
PPP4R4-202ENST00000328839 NARFQ9UHQ1 456 aa33.72■■■□□ 2.99
PPP4R4-202ENST00000328839 CANXP27824 592 aaKnown RBP33.7■■■□□ 2.99
PPP4R4-202ENST00000328839 TEFQ10587 303 aa33.7■■■□□ 2.99
PPP4R4-202ENST00000328839 GAS2L2Q8NHY3 880 aa33.69■■■□□ 2.98
PPP4R4-202ENST00000328839 SIPA1L3O60292 1781 aaPredicted RBP33.68■■■□□ 2.98
PPP4R4-202ENST00000328839 GNAT3A8MTJ3 354 aa33.68■■■□□ 2.98
PPP4R4-202ENST00000328839 NFIXQ14938 502 aa33.68■■■□□ 2.98
PPP4R4-202ENST00000328839 C9orf131Q5VYM1 1079 aa33.68■■■□□ 2.98
PPP4R4-202ENST00000328839 NRXN2Q9P2S2 1712 aa33.65■■■□□ 2.98
PPP4R4-202ENST00000328839 STARD3NLO95772 234 aa33.65■■■□□ 2.98
PPP4R4-202ENST00000328839 IL17REQ8NFR9 667 aa33.65■■■□□ 2.98
PPP4R4-202ENST00000328839 CFAP53Q96M91 514 aa33.64■■■□□ 2.98
PPP4R4-202ENST00000328839 ZNF496Q96IT1 587 aaPredicted RBP33.63■■■□□ 2.97
PPP4R4-202ENST00000328839 BCL2L12Q9HB09 334 aa33.63■■■□□ 2.97
PPP4R4-202ENST00000328839 SBF1O95248 1867 aa33.63■■■□□ 2.97
PPP4R4-202ENST00000328839 ZNF790Q6PG37 636 aa33.62■■■□□ 2.97
PPP4R4-202ENST00000328839 NMRK2Q9NPI5 230 aa33.62■■■□□ 2.97
PPP4R4-202ENST00000328839 ZNF330Q9Y3S2 320 aaPredicted RBP33.62■■■□□ 2.97
PPP4R4-202ENST00000328839 SERPINB2P05120 415 aa33.61■■■□□ 2.97
PPP4R4-202ENST00000328839 BICDL1Q6ZP65 573 aa33.61■■■□□ 2.97
PPP4R4-202ENST00000328839 RNF181Q9P0P0 153 aa33.61■■■□□ 2.97
PPP4R4-202ENST00000328839 DLEC1Q9Y238 1755 aa33.61■■■□□ 2.97
PPP4R4-202ENST00000328839 HEG1Q9ULI3 1381 aa33.6■■■□□ 2.97
PPP4R4-202ENST00000328839 PRKAR2BP31323 418 aa33.59■■■□□ 2.97
PPP4R4-202ENST00000328839 A0A087WZG4 1122 aa33.58■■■□□ 2.97
PPP4R4-202ENST00000328839 TOMM70O94826 608 aa33.58■■■□□ 2.97
PPP4R4-202ENST00000328839 EIF5P55010 431 aaKnown RBP33.58■■■□□ 2.97
PPP4R4-202ENST00000328839 PHACTR3Q96KR7 559 aa33.57■■■□□ 2.96
PPP4R4-202ENST00000328839 TEX13AQ9BXU3 409 aaPredicted RBP33.57■■■□□ 2.96
PPP4R4-202ENST00000328839 SCN7AQ01118 1682 aa33.57■■■□□ 2.96
PPP4R4-202ENST00000328839 FMNL2Q96PY5 1086 aa33.55■■■□□ 2.96
PPP4R4-202ENST00000328839 RSPH6AQ9H0K4 717 aa33.55■■■□□ 2.96
PPP4R4-202ENST00000328839 NUDCQ9Y266 331 aa33.55■■■□□ 2.96
PPP4R4-202ENST00000328839 CARMIL3Q8ND23 1372 aa33.53■■■□□ 2.96
PPP4R4-202ENST00000328839 CEMIPQ8WUJ3 1361 aa33.53■■■□□ 2.96
PPP4R4-202ENST00000328839 BTBD11A6QL63 1104 aa33.53■■■□□ 2.96
PPP4R4-202ENST00000328839 C2CD5Q86YS7 1000 aa33.53■■■□□ 2.96
PPP4R4-202ENST00000328839 C16orf71Q8IYS4 520 aaPredicted RBP33.53■■■□□ 2.96
PPP4R4-202ENST00000328839 TBC1D2BQ9UPU7 963 aa33.53■■■□□ 2.96
PPP4R4-202ENST00000328839 RASSF7Q02833 373 aa33.52■■■□□ 2.96
PPP4R4-202ENST00000328839 NPM2Q86SE8 214 aaKnown RBP33.52■■■□□ 2.96
PPP4R4-202ENST00000328839 KDM2BQ8NHM5 1336 aa33.52■■■□□ 2.96
PPP4R4-202ENST00000328839 U2AF1L5P0DN76 240 aaPredicted RBP33.51■■■□□ 2.95
PPP4R4-202ENST00000328839 U2AF1Q01081 240 aaKnown RBP eCLIP33.51■■■□□ 2.95
PPP4R4-202ENST00000328839 TBC1D9BQ66K14 1250 aa33.51■■■□□ 2.95
PPP4R4-202ENST00000328839 ANKRD31Q8N7Z5 1873 aa33.5■■■□□ 2.95
PPP4R4-202ENST00000328839 H0YIN7 160 aa33.5■■■□□ 2.95
PPP4R4-202ENST00000328839 TTLL6Q8N841 843 aa33.5■■■□□ 2.95
PPP4R4-202ENST00000328839 CCDC88AQ3V6T2 1871 aa33.5■■■□□ 2.95
PPP4R4-202ENST00000328839 TNRC6CQ9HCJ0 1690 aaKnown RBP33.49■■■□□ 2.95
PPP4R4-202ENST00000328839 KCNQ3O43525 872 aa33.49■■■□□ 2.95
PPP4R4-202ENST00000328839 IL6STP40189 918 aaPredicted RBP33.49■■■□□ 2.95
PPP4R4-202ENST00000328839 APLP1P51693 650 aa33.49■■■□□ 2.95
PPP4R4-202ENST00000328839 A1BGP04217 495 aa33.48■■■□□ 2.95
PPP4R4-202ENST00000328839 PPP2R1AP30153 589 aa33.48■■■□□ 2.95
PPP4R4-202ENST00000328839 RTF1Q92541 710 aaKnown RBP33.47■■■□□ 2.95
PPP4R4-202ENST00000328839 BCORQ6W2J9 1755 aa33.44■■■□□ 2.94
PPP4R4-202ENST00000328839 MCM10Q7L590 875 aa33.44■■■□□ 2.94
PPP4R4-202ENST00000328839 CCDC24Q8N4L8 307 aa33.44■■■□□ 2.94
PPP4R4-202ENST00000328839 RBM46Q8TBY0 533 aaKnown RBP33.44■■■□□ 2.94
PPP4R4-202ENST00000328839 RRAGCQ9HB90 399 aa33.44■■■□□ 2.94
PPP4R4-202ENST00000328839 TIAM2Q8IVF5 1701 aa33.44■■■□□ 2.94
PPP4R4-202ENST00000328839 COL11A2P13942 1736 aaPredicted RBP33.43■■■□□ 2.94
PPP4R4-202ENST00000328839 NPHP1O15259 732 aa33.43■■■□□ 2.94
PPP4R4-202ENST00000328839 ZNF622Q969S3 477 aaKnown RBP eCLIP33.43■■■□□ 2.94
PPP4R4-202ENST00000328839 LMNB1P20700 586 aa33.42■■■□□ 2.94
PPP4R4-202ENST00000328839 WDR90Q96KV7 1748 aa33.42■■■□□ 2.94
PPP4R4-202ENST00000328839 CACNA1SQ13698 1873 aa33.42■■■□□ 2.94
PPP4R4-202ENST00000328839 PIP4K2AP48426 406 aaPredicted RBP33.41■■■□□ 2.94
PPP4R4-202ENST00000328839 PRR5LQ6MZQ0 368 aa33.41■■■□□ 2.94
PPP4R4-202ENST00000328839 PDE6BP35913 854 aa33.4■■■□□ 2.94
PPP4R4-202ENST00000328839 DZIP3Q86Y13 1208 aaKnown RBP33.4■■■□□ 2.94
PPP4R4-202ENST00000328839 SETDB2Q96T68 719 aa33.4■■■□□ 2.94
PPP4R4-202ENST00000328839 BRIP1Q9BX63 1249 aa33.4■■■□□ 2.94
PPP4R4-202ENST00000328839 USP16Q9Y5T5 823 aa33.4■■■□□ 2.94
PPP4R4-202ENST00000328839 CAMTA2O94983 1202 aa33.39■■■□□ 2.94
PPP4R4-202ENST00000328839 ZNF219Q9P2Y4 722 aaPredicted RBP33.39■■■□□ 2.94
PPP4R4-202ENST00000328839 ZC3H4Q9UPT8 1303 aaKnown RBP33.38■■■□□ 2.93
PPP4R4-202ENST00000328839 PRAMEF22A3QJZ6 481 aa33.38■■■□□ 2.93
PPP4R4-202ENST00000328839 DCTN1Q14203 1278 aa33.38■■■□□ 2.93
PPP4R4-202ENST00000328839 CNBD1Q8NA66 436 aa33.38■■■□□ 2.93
PPP4R4-202ENST00000328839 PRELPP51888 382 aa33.37■■■□□ 2.93
PPP4R4-202ENST00000328839 PDZRN3Q9UPQ7 1066 aa33.37■■■□□ 2.93
PPP4R4-202ENST00000328839 SNRPA1P09661 255 aaKnown RBP33.35■■■□□ 2.93
PPP4R4-202ENST00000328839 NFKBIEO00221 500 aa33.34■■■□□ 2.93
PPP4R4-202ENST00000328839 ST5P78524 1137 aa33.34■■■□□ 2.93
PPP4R4-202ENST00000328839 FSTL1Q12841 308 aa33.34■■■□□ 2.93
PPP4R4-202ENST00000328839 DLG5Q8TDM6 1919 aa33.34■■■□□ 2.93
PPP4R4-202ENST00000328839 C21orf2O43822 256 aa33.33■■■□□ 2.93
PPP4R4-202ENST00000328839 FER1L6Q2WGJ9 1857 aa33.33■■■□□ 2.93
PPP4R4-202ENST00000328839 GLTPD2A6NH11 291 aa33.31■■■□□ 2.92
PPP4R4-202ENST00000328839 IFFO2Q5TF58 517 aa33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms