RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 MRVI1Q9Y6F6 885 aa15.27■□□□□ 0.03
CCDC60-201ENST00000327554 NRBP1Q9UHY1 535 aa15.26■□□□□ 0.03
CCDC60-201ENST00000327554 SMC3Q9UQE7 1217 aa15.26■□□□□ 0.03
CCDC60-201ENST00000327554 MTMR6Q9Y217 621 aa15.26■□□□□ 0.03
CCDC60-201ENST00000327554 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.26■□□□□ 0.03
CCDC60-201ENST00000327554 PAXBP1Q9Y5B6 917 aa15.26■□□□□ 0.03
CCDC60-201ENST00000327554 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
CCDC60-201ENST00000327554 ZSCAN25Q6NSZ9 544 aa15.26■□□□□ 0.03
CCDC60-201ENST00000327554 LARP6Q9BRS8 491 aaKnown RBP15.26■□□□□ 0.03
CCDC60-201ENST00000327554 LIMCH1Q9UPQ0 1083 aa15.26■□□□□ 0.03
CCDC60-201ENST00000327554 RAD50Q92878 1312 aa15.26■□□□□ 0.03
CCDC60-201ENST00000327554 LUZP1Q86V48 1076 aa15.25■□□□□ 0.03
CCDC60-201ENST00000327554 CCDC112Q8NEF3 446 aa15.25■□□□□ 0.03
CCDC60-201ENST00000327554 F6X3S4 739 aa15.25■□□□□ 0.03
CCDC60-201ENST00000327554 LARGE1O95461 756 aa15.25■□□□□ 0.03
CCDC60-201ENST00000327554 GNAI2P04899 355 aa15.25■□□□□ 0.03
CCDC60-201ENST00000327554 CCT4P50991 539 aaKnown RBP15.25■□□□□ 0.03
CCDC60-201ENST00000327554 TYRO3Q06418 890 aa15.25■□□□□ 0.03
CCDC60-201ENST00000327554 G2E3Q7L622 706 aa15.25■□□□□ 0.03
CCDC60-201ENST00000327554 FAM53CQ9NYF3 392 aa15.25■□□□□ 0.03
CCDC60-201ENST00000327554 AATKQ6ZMQ8 1374 aa15.25■□□□□ 0.03
CCDC60-201ENST00000327554 SLC4A10Q6U841 1118 aa15.24■□□□□ 0.03
CCDC60-201ENST00000327554 PLA2G4DQ86XP0 818 aa15.24■□□□□ 0.03
CCDC60-201ENST00000327554 PNMA6EA0A0J9YXQ4 647 aa15.24■□□□□ 0.03
CCDC60-201ENST00000327554 IRX5P78411 483 aaPredicted RBP15.24■□□□□ 0.03
CCDC60-201ENST00000327554 AOX1Q06278 1338 aa15.24■□□□□ 0.03
CCDC60-201ENST00000327554 RASEFQ8IZ41 740 aa15.24■□□□□ 0.03
CCDC60-201ENST00000327554 ZNF75DP51815 510 aa15.23■□□□□ 0.03
CCDC60-201ENST00000327554 MAP3K11Q16584 847 aa15.23■□□□□ 0.03
CCDC60-201ENST00000327554 KRT222Q8N1A0 295 aa15.23■□□□□ 0.03
CCDC60-201ENST00000327554 CBX8Q9HC52 389 aa15.23■□□□□ 0.03
CCDC60-201ENST00000327554 NAP1L2Q9ULW6 460 aaPredicted RBP15.23■□□□□ 0.03
CCDC60-201ENST00000327554 NRKQ7Z2Y5 1582 aa15.23■□□□□ 0.03
CCDC60-201ENST00000327554 GJB2P29033 226 aa15.23■□□□□ 0.03
CCDC60-201ENST00000327554 KMT5BQ4FZB7 885 aa15.23■□□□□ 0.03
CCDC60-201ENST00000327554 ZRANB1Q9UGI0 708 aa15.23■□□□□ 0.03
CCDC60-201ENST00000327554 XRN1Q8IZH2 1706 aaKnown RBP15.22■□□□□ 0.03
CCDC60-201ENST00000327554 CCDC66A2RUB6 948 aa15.22■□□□□ 0.03
CCDC60-201ENST00000327554 KCNJ4P48050 445 aa15.22■□□□□ 0.03
CCDC60-201ENST00000327554 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.22■□□□□ 0.03
CCDC60-201ENST00000327554 NME9Q86XW9 330 aa15.22■□□□□ 0.03
CCDC60-201ENST00000327554 ZNF397Q8NF99 534 aaPredicted RBP15.22■□□□□ 0.03
CCDC60-201ENST00000327554 NUP62CLQ9H1M0 184 aa15.22■□□□□ 0.03
CCDC60-201ENST00000327554 SGSM2O43147 1006 aa15.22■□□□□ 0.03
CCDC60-201ENST00000327554 DTNBO60941 627 aa15.22■□□□□ 0.03
CCDC60-201ENST00000327554 LIG1P18858 919 aa15.22■□□□□ 0.03
CCDC60-201ENST00000327554 IDI1Q13907 227 aa15.22■□□□□ 0.03
CCDC60-201ENST00000327554 MCM10Q7L590 875 aa15.22■□□□□ 0.03
CCDC60-201ENST00000327554 TTC6Q86TZ1 520 aa15.22■□□□□ 0.03
CCDC60-201ENST00000327554 CACTINQ8WUQ7 758 aaKnown RBP15.22■□□□□ 0.03
CCDC60-201ENST00000327554 LSG1Q9H089 658 aaKnown RBP15.22■□□□□ 0.03
CCDC60-201ENST00000327554 ATP8B2P98198 1209 aa15.21■□□□□ 0.03
CCDC60-201ENST00000327554 RTF1Q92541 710 aaKnown RBP15.21■□□□□ 0.03
CCDC60-201ENST00000327554 EDC4Q6P2E9 1401 aaKnown RBP15.21■□□□□ 0.03
CCDC60-201ENST00000327554 VGLL3A8MV65 326 aa15.21■□□□□ 0.02
CCDC60-201ENST00000327554 CAMK4Q16566 473 aa15.21■□□□□ 0.02
CCDC60-201ENST00000327554 TPD52L1Q16890 204 aaPredicted RBP15.21■□□□□ 0.02
CCDC60-201ENST00000327554 ANO6Q4KMQ2 910 aa15.21■□□□□ 0.02
CCDC60-201ENST00000327554 AEBP1Q8IUX7 1158 aa15.21■□□□□ 0.02
CCDC60-201ENST00000327554 CCDC83Q8IWF9 413 aa15.21■□□□□ 0.02
CCDC60-201ENST00000327554 DRC7Q8IY82 874 aa15.21■□□□□ 0.02
CCDC60-201ENST00000327554 TDRD7Q8NHU6 1098 aaKnown RBP15.21■□□□□ 0.02
CCDC60-201ENST00000327554 HYPKQ9NX55 129 aa15.21■□□□□ 0.02
CCDC60-201ENST00000327554 TMEM131LA2VDJ0 1609 aa15.21■□□□□ 0.02
CCDC60-201ENST00000327554 N4BP2Q86UW6 1770 aaPredicted RBP15.2■□□□□ 0.02
CCDC60-201ENST00000327554 CPA1P15085 419 aa15.2■□□□□ 0.02
CCDC60-201ENST00000327554 RRS1Q15050 365 aaKnown RBP15.2■□□□□ 0.02
CCDC60-201ENST00000327554 CEP135Q66GS9 1140 aa15.2■□□□□ 0.02
CCDC60-201ENST00000327554 TRIM5Q9C035 493 aa15.2■□□□□ 0.02
CCDC60-201ENST00000327554 SETD1AO15047 1707 aaKnown RBP15.2■□□□□ 0.02
CCDC60-201ENST00000327554 CRYBG1Q9Y4K1 1723 aa15.2■□□□□ 0.02
CCDC60-201ENST00000327554 ALKQ9UM73 1620 aa15.2■□□□□ 0.02
CCDC60-201ENST00000327554 ST3GAL1Q11201 340 aa15.2■□□□□ 0.02
CCDC60-201ENST00000327554 CCDC144BQ3MJ40 725 aa15.2■□□□□ 0.02
CCDC60-201ENST00000327554 CCDC144CPQ8IYA2 1237 aa15.2■□□□□ 0.02
CCDC60-201ENST00000327554 CRB1P82279 1406 aa15.2■□□□□ 0.02
CCDC60-201ENST00000327554 ZNF215Q9UL58 517 aaPredicted RBP15.19■□□□□ 0.02
CCDC60-201ENST00000327554 ELP1O95163 1332 aa15.19■□□□□ 0.02
CCDC60-201ENST00000327554 CHD2O14647 1828 aaKnown RBP15.19■□□□□ 0.02
CCDC60-201ENST00000327554 RBM6P78332 1123 aaKnown RBP15.19■□□□□ 0.02
CCDC60-201ENST00000327554 RBM43Q6ZSC3 357 aaKnown RBP15.19■□□□□ 0.02
CCDC60-201ENST00000327554 CKAP2LQ8IYA6 745 aa15.19■□□□□ 0.02
CCDC60-201ENST00000327554 TIGD1Q96MW7 591 aa15.19■□□□□ 0.02
CCDC60-201ENST00000327554 MLH3Q9UHC1 1453 aa15.18■□□□□ 0.02
CCDC60-201ENST00000327554 ERBB3P21860 1342 aa15.18■□□□□ 0.02
CCDC60-201ENST00000327554 VPS37CA5D8V6 355 aaPredicted RBP15.18■□□□□ 0.02
CCDC60-201ENST00000327554 MAP4K4O95819 1239 aaPredicted RBP15.18■□□□□ 0.02
CCDC60-201ENST00000327554 IPO4Q8TEX9 1081 aaKnown RBP15.18■□□□□ 0.02
CCDC60-201ENST00000327554 CHMP3Q9Y3E7 222 aa15.18■□□□□ 0.02
CCDC60-201ENST00000327554 MON2Q7Z3U7 1717 aa15.18■□□□□ 0.02
CCDC60-201ENST00000327554 CASTP20810 708 aaKnown RBP15.18■□□□□ 0.02
CCDC60-201ENST00000327554 FBXO38Q6PIJ6 1188 aa15.18■□□□□ 0.02
CCDC60-201ENST00000327554 PI4K2BQ8TCG2 481 aa15.18■□□□□ 0.02
CCDC60-201ENST00000327554 ZNF592Q92610 1267 aa15.18■□□□□ 0.02
CCDC60-201ENST00000327554 ARHGEF10O15013 1369 aa15.18■□□□□ 0.02
CCDC60-201ENST00000327554 TTC21AQ8NDW8 1320 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 CPS1P31327 1500 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 DLC1Q96QB1 1528 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 FAM208AQ9UK61 1670 aaKnown RBP15.17■□□□□ 0.02
CCDC60-201ENST00000327554 USP27XA6NNY8 438 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms