RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 POLRMTO00411 1230 aaKnown RBP10.94□□□□□ -0.66
CCNC-201ENST00000326298 DCTN1Q14203 1278 aa10.94□□□□□ -0.66
CCNC-201ENST00000326298 GNAT3A8MTJ3 354 aa10.93□□□□□ -0.66
CCNC-201ENST00000326298 CANXP27824 592 aaKnown RBP10.93□□□□□ -0.66
CCNC-201ENST00000326298 PIP4K2AP48426 406 aaPredicted RBP10.93□□□□□ -0.66
CCNC-201ENST00000326298 PARP3Q9Y6F1 533 aa10.93□□□□□ -0.66
CCNC-201ENST00000326298 SIPA1L3O60292 1781 aaPredicted RBP10.93□□□□□ -0.66
CCNC-201ENST00000326298 BRCA1P38398 1863 aaKnown RBP10.93□□□□□ -0.66
CCNC-201ENST00000326298 COL15A1P39059 1388 aa10.93□□□□□ -0.66
CCNC-201ENST00000326298 NFIXQ14938 502 aa10.93□□□□□ -0.66
CCNC-201ENST00000326298 ZNF790Q6PG37 636 aa10.93□□□□□ -0.66
CCNC-201ENST00000326298 MCM10Q7L590 875 aa10.93□□□□□ -0.66
CCNC-201ENST00000326298 CEMIPQ8WUJ3 1361 aa10.92□□□□□ -0.66
CCNC-201ENST00000326298 GIGYF1O75420 1035 aaPredicted RBP10.92□□□□□ -0.66
CCNC-201ENST00000326298 TGFB2P61812 414 aa10.92□□□□□ -0.66
CCNC-201ENST00000326298 U2AF1L5P0DN76 240 aaPredicted RBP10.92□□□□□ -0.66
CCNC-201ENST00000326298 U2AF1Q01081 240 aaKnown RBP eCLIP10.92□□□□□ -0.66
CCNC-201ENST00000326298 CARMIL3Q8ND23 1372 aa10.91□□□□□ -0.66
CCNC-201ENST00000326298 SENP3-EIF4A1A0A087X0R7 540 aa10.91□□□□□ -0.66
CCNC-201ENST00000326298 A1BGP04217 495 aa10.91□□□□□ -0.66
CCNC-201ENST00000326298 TEFQ10587 303 aa10.91□□□□□ -0.66
CCNC-201ENST00000326298 CCDC24Q8N4L8 307 aa10.91□□□□□ -0.66
CCNC-201ENST00000326298 GAS2L2Q8NHY3 880 aa10.91□□□□□ -0.66
CCNC-201ENST00000326298 NARFQ9UHQ1 456 aa10.91□□□□□ -0.66
CCNC-201ENST00000326298 AFDNP55196 1824 aaKnown RBP10.91□□□□□ -0.66
CCNC-201ENST00000326298 FCHSD2O94868 740 aa10.9□□□□□ -0.66
CCNC-201ENST00000326298 EIF5P55010 431 aaKnown RBP10.9□□□□□ -0.66
CCNC-201ENST00000326298 TBC1D2BQ9UPU7 963 aa10.9□□□□□ -0.66
CCNC-201ENST00000326298 USP16Q9Y5T5 823 aa10.9□□□□□ -0.66
CCNC-201ENST00000326298 HEG1Q9ULI3 1381 aa10.9□□□□□ -0.66
CCNC-201ENST00000326298 ZPR1O75312 459 aa10.9□□□□□ -0.66
CCNC-201ENST00000326298 BICDL1Q6ZP65 573 aa10.9□□□□□ -0.66
CCNC-201ENST00000326298 VSIG10Q8N0Z9 540 aa10.9□□□□□ -0.66
CCNC-201ENST00000326298 MIS18AQ9NYP9 233 aa10.9□□□□□ -0.66
CCNC-201ENST00000326298 ARHGAP27Q6ZUM4 889 aa10.89□□□□□ -0.67
CCNC-201ENST00000326298 TTC5Q8N0Z6 440 aa10.89□□□□□ -0.67
CCNC-201ENST00000326298 ZNF330Q9Y3S2 320 aaPredicted RBP10.89□□□□□ -0.67
CCNC-201ENST00000326298 PRELPP51888 382 aa10.89□□□□□ -0.67
CCNC-201ENST00000326298 TBC1D9BQ66K14 1250 aa10.89□□□□□ -0.67
CCNC-201ENST00000326298 GPBP1L1Q9HC44 474 aaPredicted RBP10.89□□□□□ -0.67
CCNC-201ENST00000326298 BTBD11A6QL63 1104 aa10.88□□□□□ -0.67
CCNC-201ENST00000326298 CFAP53Q96M91 514 aa10.88□□□□□ -0.67
CCNC-201ENST00000326298 NRXN2Q9P2S2 1712 aa10.88□□□□□ -0.67
CCNC-201ENST00000326298 KIF3CO14782 793 aa10.88□□□□□ -0.67
CCNC-201ENST00000326298 SERPINB2P05120 415 aa10.88□□□□□ -0.67
CCNC-201ENST00000326298 THUMPD2Q9BTF0 503 aaKnown RBP10.88□□□□□ -0.67
CCNC-201ENST00000326298 PIM2Q9P1W9 311 aa10.87□□□□□ -0.67
CCNC-201ENST00000326298 STARD3NLO95772 234 aa10.86□□□□□ -0.67
CCNC-201ENST00000326298 NBPF26B4DH59 902 aa10.86□□□□□ -0.67
CCNC-201ENST00000326298 RASSF7Q02833 373 aa10.86□□□□□ -0.67
CCNC-201ENST00000326298 NBPF10Q6P3W6 841 aaKnown RBP10.86□□□□□ -0.67
CCNC-201ENST00000326298 NBPF15Q8N660 670 aa10.86□□□□□ -0.67
CCNC-201ENST00000326298 FMNL2Q96PY5 1086 aa10.86□□□□□ -0.67
CCNC-201ENST00000326298 PLEKHF1Q96S99 279 aa10.86□□□□□ -0.67
CCNC-201ENST00000326298 NMRK2Q9NPI5 230 aa10.86□□□□□ -0.67
CCNC-201ENST00000326298 NUDCQ9Y266 331 aa10.86□□□□□ -0.67
CCNC-201ENST00000326298 CAMTA2O94983 1202 aa10.85□□□□□ -0.67
CCNC-201ENST00000326298 DALRD3Q5D0E6 543 aaKnown RBP10.85□□□□□ -0.67
CCNC-201ENST00000326298 C9orf131Q5VYM1 1079 aa10.85□□□□□ -0.67
CCNC-201ENST00000326298 ARFGEF1Q9Y6D6 1849 aa10.85□□□□□ -0.67
CCNC-201ENST00000326298 ANKRD31Q8N7Z5 1873 aa10.85□□□□□ -0.67
CCNC-201ENST00000326298 IL6STP40189 918 aaPredicted RBP10.84□□□□□ -0.67
CCNC-201ENST00000326298 PRR5LQ6MZQ0 368 aa10.84□□□□□ -0.67
CCNC-201ENST00000326298 DLG5Q8TDM6 1919 aa10.84□□□□□ -0.67
CCNC-201ENST00000326298 SCN7AQ01118 1682 aa10.84□□□□□ -0.67
CCNC-201ENST00000326298 SBF1O95248 1867 aa10.83□□□□□ -0.68
CCNC-201ENST00000326298 COL11A2P13942 1736 aaPredicted RBP10.83□□□□□ -0.68
CCNC-201ENST00000326298 DDX10Q13206 875 aaKnown RBP10.82□□□□□ -0.68
CCNC-201ENST00000326298 C2CD5Q86YS7 1000 aa10.82□□□□□ -0.68
CCNC-201ENST00000326298 RTF1Q92541 710 aaKnown RBP10.82□□□□□ -0.68
CCNC-201ENST00000326298 ZNF219Q9P2Y4 722 aaPredicted RBP10.82□□□□□ -0.68
CCNC-201ENST00000326298 DZIP3Q86Y13 1208 aaKnown RBP10.82□□□□□ -0.68
CCNC-201ENST00000326298 TEX13AQ9BXU3 409 aaPredicted RBP10.82□□□□□ -0.68
CCNC-201ENST00000326298 RNF181Q9P0P0 153 aa10.82□□□□□ -0.68
CCNC-201ENST00000326298 TAF7Q15545 349 aaPredicted RBP10.81□□□□□ -0.68
CCNC-201ENST00000326298 HLFQ16534 295 aa10.81□□□□□ -0.68
CCNC-201ENST00000326298 DLEC1Q9Y238 1755 aa10.81□□□□□ -0.68
CCNC-201ENST00000326298 NFKBIEO00221 500 aa10.81□□□□□ -0.68
CCNC-201ENST00000326298 SNRPA1P09661 255 aaKnown RBP10.81□□□□□ -0.68
CCNC-201ENST00000326298 BCORQ6W2J9 1755 aa10.8□□□□□ -0.68
CCNC-201ENST00000326298 A0A087WZG4 1122 aa10.8□□□□□ -0.68
CCNC-201ENST00000326298 SLC51AQ86UW1 340 aa10.8□□□□□ -0.68
CCNC-201ENST00000326298 NFE2L2Q16236 605 aa10.8□□□□□ -0.68
CCNC-201ENST00000326298 NGEFQ8N5V2 710 aa10.8□□□□□ -0.68
CCNC-201ENST00000326298 TTLL6Q8N841 843 aa10.8□□□□□ -0.68
CCNC-201ENST00000326298 FAM177BA6PVY3 158 aa10.79□□□□□ -0.68
CCNC-201ENST00000326298 H0YIN7 160 aa10.79□□□□□ -0.68
CCNC-201ENST00000326298 HTATSF1O43719 755 aaKnown RBP10.79□□□□□ -0.68
CCNC-201ENST00000326298 C21orf2O43822 256 aa10.79□□□□□ -0.68
CCNC-201ENST00000326298 HSPA6P17066 643 aa10.79□□□□□ -0.68
CCNC-201ENST00000326298 HTRA3P83110 453 aa10.79□□□□□ -0.68
CCNC-201ENST00000326298 OLFM4Q6UX06 510 aa10.79□□□□□ -0.68
CCNC-201ENST00000326298 ZNF622Q969S3 477 aaKnown RBP eCLIP10.79□□□□□ -0.68
CCNC-201ENST00000326298 SETDB2Q96T68 719 aa10.79□□□□□ -0.68
CCNC-201ENST00000326298 RRP7AQ9Y3A4 280 aaKnown RBP10.79□□□□□ -0.68
CCNC-201ENST00000326298 KDM3BQ7LBC6 1761 aa10.79□□□□□ -0.68
CCNC-201ENST00000326298 SLX4Q8IY92 1834 aa10.79□□□□□ -0.68
CCNC-201ENST00000326298 EIF4A1P60842 406 aaKnown RBP10.78□□□□□ -0.68
CCNC-201ENST00000326298 BRIP1Q9BX63 1249 aa10.78□□□□□ -0.68
CCNC-201ENST00000326298 TTLL7Q6ZT98 887 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms