RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 PTPRCP08575 1304 aa28.41■■■□□ 2.14
PACS2-201ENST00000325438 RAB11FIP3O75154 756 aa28.4■■■□□ 2.14
PACS2-201ENST00000325438 PPP1R42Q7Z4L9 355 aa28.4■■■□□ 2.14
PACS2-201ENST00000325438 CLASRPQ8N2M8 674 aaKnown RBP28.4■■■□□ 2.14
PACS2-201ENST00000325438 GPATCH3Q96I76 525 aa28.4■■■□□ 2.14
PACS2-201ENST00000325438 KIAA1524Q8TCG1 905 aa28.39■■■□□ 2.14
PACS2-201ENST00000325438 ANXA1P04083 346 aa28.39■■■□□ 2.14
PACS2-201ENST00000325438 CUL4AQ13619 759 aa28.39■■■□□ 2.14
PACS2-201ENST00000325438 GNL2Q13823 731 aaKnown RBP28.39■■■□□ 2.14
PACS2-201ENST00000325438 PTPN14Q15678 1187 aa28.39■■■□□ 2.14
PACS2-201ENST00000325438 HDGFL1Q5TGJ6 251 aa28.39■■■□□ 2.14
PACS2-201ENST00000325438 KIF20AO95235 890 aa28.39■■■□□ 2.13
PACS2-201ENST00000325438 RASEFQ8IZ41 740 aa28.39■■■□□ 2.13
PACS2-201ENST00000325438 NUDT16Q96DE0 195 aaKnown RBP28.38■■■□□ 2.13
PACS2-201ENST00000325438 SNX14Q9Y5W7 946 aa28.38■■■□□ 2.13
PACS2-201ENST00000325438 IQGAP1P46940 1657 aa28.38■■■□□ 2.13
PACS2-201ENST00000325438 FAM177A1Q8N128 213 aaPredicted RBP28.38■■■□□ 2.13
PACS2-201ENST00000325438 ZBTB22O15209 634 aa28.37■■■□□ 2.13
PACS2-201ENST00000325438 CEP135Q66GS9 1140 aa28.37■■■□□ 2.13
PACS2-201ENST00000325438 SIL1Q9H173 461 aa28.37■■■□□ 2.13
PACS2-201ENST00000325438 HTATSF1O43719 755 aaKnown RBP28.36■■■□□ 2.13
PACS2-201ENST00000325438 LIG1P18858 919 aa28.36■■■□□ 2.13
PACS2-201ENST00000325438 BRPF1P55201 1214 aaPredicted RBP28.36■■■□□ 2.13
PACS2-201ENST00000325438 SF3A1Q15459 793 aaKnown RBP28.36■■■□□ 2.13
PACS2-201ENST00000325438 RIMS2Q9UQ26 1411 aa28.36■■■□□ 2.13
PACS2-201ENST00000325438 EIF4A2Q14240 407 aaKnown RBP28.35■■■□□ 2.13
PACS2-201ENST00000325438 NGDNQ8NEJ9 315 aaKnown RBP28.35■■■□□ 2.13
PACS2-201ENST00000325438 SDF4Q9BRK5 362 aa28.35■■■□□ 2.13
PACS2-201ENST00000325438 PLCD3Q8N3E9 789 aa28.34■■■□□ 2.13
PACS2-201ENST00000325438 FSD1Q9BTV5 496 aa28.34■■■□□ 2.13
PACS2-201ENST00000325438 SMC2O95347 1197 aa28.34■■■□□ 2.13
PACS2-201ENST00000325438 UTP14CQ5TAP6 766 aaKnown RBP28.34■■■□□ 2.13
PACS2-201ENST00000325438 CCDC66A2RUB6 948 aa28.34■■■□□ 2.13
PACS2-201ENST00000325438 LARGE1O95461 756 aa28.33■■■□□ 2.13
PACS2-201ENST00000325438 ZNF853P0CG23 659 aa28.33■■■□□ 2.13
PACS2-201ENST00000325438 RUFY3Q7L099 469 aa28.33■■■□□ 2.13
PACS2-201ENST00000325438 POLR3GO15318 223 aaPredicted RBP28.33■■■□□ 2.13
PACS2-201ENST00000325438 RHPN1Q8TCX5 695 aa28.33■■■□□ 2.13
PACS2-201ENST00000325438 ATP8B2P98198 1209 aa28.32■■■□□ 2.12
PACS2-201ENST00000325438 BLOC1S2Q6QNY1 142 aa28.32■■■□□ 2.12
PACS2-201ENST00000325438 CCDC73Q6ZRK6 1079 aa28.32■■■□□ 2.12
PACS2-201ENST00000325438 OGFRQ9NZT2 677 aa28.32■■■□□ 2.12
PACS2-201ENST00000325438 A0A087WWV3 80 aa28.32■■■□□ 2.12
PACS2-201ENST00000325438 CEP152O94986 1710 aa28.31■■■□□ 2.12
PACS2-201ENST00000325438 RNF17Q9BXT8 1623 aaKnown RBP28.31■■■□□ 2.12
PACS2-201ENST00000325438 PDCP20941 246 aa28.31■■■□□ 2.12
PACS2-201ENST00000325438 CBX8Q9HC52 389 aa28.31■■■□□ 2.12
PACS2-201ENST00000325438 IL25Q9H293 177 aa28.31■■■□□ 2.12
PACS2-201ENST00000325438 PTCH1Q13635 1447 aa28.3■■■□□ 2.12
PACS2-201ENST00000325438 GUCY1B3Q02153 619 aa28.3■■■□□ 2.12
PACS2-201ENST00000325438 AIMP1Q12904 312 aaKnown RBP28.3■■■□□ 2.12
PACS2-201ENST00000325438 KCNF1Q9H3M0 494 aa28.3■■■□□ 2.12
PACS2-201ENST00000325438 PUS7Q96PZ0 661 aaKnown RBP28.3■■■□□ 2.12
PACS2-201ENST00000325438 SKILP12757 684 aa28.29■■■□□ 2.12
PACS2-201ENST00000325438 AACSQ86V21 672 aa28.29■■■□□ 2.12
PACS2-201ENST00000325438 ERCC4Q92889 916 aaPredicted RBP28.29■■■□□ 2.12
PACS2-201ENST00000325438 CHL1O00533 1208 aa28.29■■■□□ 2.12
PACS2-201ENST00000325438 HSPA4P34932 840 aa28.29■■■□□ 2.12
PACS2-201ENST00000325438 TAF7Q15545 349 aaPredicted RBP28.29■■■□□ 2.12
PACS2-201ENST00000325438 CCDC61Q9Y6R9 512 aa28.29■■■□□ 2.12
PACS2-201ENST00000325438 LMOD2Q6P5Q4 547 aa28.29■■■□□ 2.12
PACS2-201ENST00000325438 CCDC8Q9H0W5 538 aaPredicted RBP28.29■■■□□ 2.12
PACS2-201ENST00000325438 MYOM1P52179 1685 aa28.28■■■□□ 2.12
PACS2-201ENST00000325438 KIF1BPQ96EK5 621 aa28.28■■■□□ 2.12
PACS2-201ENST00000325438 ABCA6Q8N139 1617 aa28.28■■■□□ 2.12
PACS2-201ENST00000325438 CFAP74Q9C0B2 1584 aa28.28■■■□□ 2.12
PACS2-201ENST00000325438 BOLA2Q9H3K6 86 aa28.28■■■□□ 2.12
PACS2-201ENST00000325438 USP16Q9Y5T5 823 aa28.28■■■□□ 2.12
PACS2-201ENST00000325438 CDC37L1Q7L3B6 337 aa28.28■■■□□ 2.12
PACS2-201ENST00000325438 TTC6Q86TZ1 520 aa28.28■■■□□ 2.12
PACS2-201ENST00000325438 SLC52A1Q9NWF4 448 aa28.28■■■□□ 2.12
PACS2-201ENST00000325438 KINO60870 393 aaKnown RBP28.27■■■□□ 2.12
PACS2-201ENST00000325438 KRT222Q8N1A0 295 aa28.27■■■□□ 2.12
PACS2-201ENST00000325438 SMTNL1A8MU46 457 aa28.27■■■□□ 2.12
PACS2-201ENST00000325438 RNF20Q5VTR2 975 aa28.27■■■□□ 2.12
PACS2-201ENST00000325438 ZFP91Q96JP5 570 aaPredicted RBP28.27■■■□□ 2.12
PACS2-201ENST00000325438 ZSCAN31Q96LW9 406 aaPredicted RBP28.27■■■□□ 2.12
PACS2-201ENST00000325438 LRRC2Q9BYS8 371 aa28.27■■■□□ 2.12
PACS2-201ENST00000325438 GTF2F1P35269 517 aaKnown RBP eCLIP28.26■■■□□ 2.11
PACS2-201ENST00000325438 ADCK5Q3MIX3 580 aa28.26■■■□□ 2.11
PACS2-201ENST00000325438 MNS1Q8NEH6 495 aa28.26■■■□□ 2.11
PACS2-201ENST00000325438 GTF3C6Q969F1 213 aa28.26■■■□□ 2.11
PACS2-201ENST00000325438 MAP3K4Q9Y6R4 1608 aa28.26■■■□□ 2.11
PACS2-201ENST00000325438 AP5Z1O43299 807 aa28.26■■■□□ 2.11
PACS2-201ENST00000325438 ME1P48163 572 aa28.26■■■□□ 2.11
PACS2-201ENST00000325438 FEZ1Q99689 392 aa28.26■■■□□ 2.11
PACS2-201ENST00000325438 TMX1Q9H3N1 280 aa28.26■■■□□ 2.11
PACS2-201ENST00000325438 MTMR6Q9Y217 621 aa28.26■■■□□ 2.11
PACS2-201ENST00000325438 ELF2Q15723 593 aa28.26■■■□□ 2.11
PACS2-201ENST00000325438 SGSM2O43147 1006 aa28.25■■■□□ 2.11
PACS2-201ENST00000325438 NCBP1Q09161 790 aaKnown RBP28.25■■■□□ 2.11
PACS2-201ENST00000325438 MTHFSDQ2M296 383 aaKnown RBP28.25■■■□□ 2.11
PACS2-201ENST00000325438 PHAXQ9H814 394 aaKnown RBP28.25■■■□□ 2.11
PACS2-201ENST00000325438 PPP6R1Q9UPN7 881 aa28.25■■■□□ 2.11
PACS2-201ENST00000325438 KIF18AQ8NI77 898 aa28.24■■■□□ 2.11
PACS2-201ENST00000325438 PSMA5P28066 241 aa28.24■■■□□ 2.11
PACS2-201ENST00000325438 ARID5BQ14865 1188 aa28.24■■■□□ 2.11
PACS2-201ENST00000325438 CHMP4AQ9BY43 222 aa28.24■■■□□ 2.11
PACS2-201ENST00000325438 SCAND2PQ9GZW5 306 aaPredicted RBP28.24■■■□□ 2.11
PACS2-201ENST00000325438 ZNF215Q9UL58 517 aaPredicted RBP28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms