RNA–Protein interactions for RNA: ENST00000325222.8

CUL1-201, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 3,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-201ENST00000325222 PRIMPOLQ96LW4 560 aa17.56■□□□□ 0.4
CUL1-201ENST00000325222 KCNF1Q9H3M0 494 aa17.56■□□□□ 0.4
CUL1-201ENST00000325222 SNX14Q9Y5W7 946 aa17.56■□□□□ 0.4
CUL1-201ENST00000325222 MAP3K19Q56UN5 1328 aa17.56■□□□□ 0.4
CUL1-201ENST00000325222 KDM4AO75164 1064 aa17.55■□□□□ 0.4
CUL1-201ENST00000325222 LARGE1O95461 756 aa17.55■□□□□ 0.4
CUL1-201ENST00000325222 ZSCAN20P17040 1043 aaPredicted RBP17.55■□□□□ 0.4
CUL1-201ENST00000325222 SYT1P21579 422 aa17.55■□□□□ 0.4
CUL1-201ENST00000325222 HMGN5P82970 282 aaKnown RBP17.55■□□□□ 0.4
CUL1-201ENST00000325222 FKBP5Q13451 457 aaPredicted RBP17.55■□□□□ 0.4
CUL1-201ENST00000325222 GIMAP6Q6P9H5 292 aa17.55■□□□□ 0.4
CUL1-201ENST00000325222 SOX12O15370 315 aa17.55■□□□□ 0.4
CUL1-201ENST00000325222 CBX1P83916 185 aa17.55■□□□□ 0.4
CUL1-201ENST00000325222 DMTNQ08495 405 aa17.55■□□□□ 0.4
CUL1-201ENST00000325222 ATP2B3Q16720 1220 aa17.55■□□□□ 0.4
CUL1-201ENST00000325222 PYCARDQ9ULZ3 195 aa17.55■□□□□ 0.4
CUL1-201ENST00000325222 AK2P54819 239 aa17.54■□□□□ 0.4
CUL1-201ENST00000325222 FLIIQ13045 1269 aa17.54■□□□□ 0.4
CUL1-201ENST00000325222 RGPD1P0DJD0 1748 aa17.54■□□□□ 0.4
CUL1-201ENST00000325222 AKAP12Q02952 1782 aa17.54■□□□□ 0.4
CUL1-201ENST00000325222 NRXN3Q9Y4C0 1643 aa17.54■□□□□ 0.4
CUL1-201ENST00000325222 FIBPO43427 364 aa17.53■□□□□ 0.4
CUL1-201ENST00000325222 TTC21BQ7Z4L5 1316 aa17.53■□□□□ 0.4
CUL1-201ENST00000325222 PPP4R3BQ5MIZ7 849 aa17.53■□□□□ 0.4
CUL1-201ENST00000325222 VGLL3A8MV65 326 aa17.52■□□□□ 0.4
CUL1-201ENST00000325222 STX6O43752 255 aa17.52■□□□□ 0.4
CUL1-201ENST00000325222 UBE2HP62256 183 aa17.52■□□□□ 0.4
CUL1-201ENST00000325222 PI4K2BQ8TCG2 481 aa17.52■□□□□ 0.4
CUL1-201ENST00000325222 USP44Q9H0E7 712 aa17.52■□□□□ 0.4
CUL1-201ENST00000325222 BCL2L12Q9HB09 334 aa17.52■□□□□ 0.4
CUL1-201ENST00000325222 LSG1Q9H089 658 aaKnown RBP17.52■□□□□ 0.39
CUL1-201ENST00000325222 XRN1Q8IZH2 1706 aaKnown RBP17.51■□□□□ 0.39
CUL1-201ENST00000325222 F13A1P00488 732 aa17.51■□□□□ 0.39
CUL1-201ENST00000325222 RAD50Q92878 1312 aa17.51■□□□□ 0.39
CUL1-201ENST00000325222 SGSM2O43147 1006 aa17.51■□□□□ 0.39
CUL1-201ENST00000325222 GNAI3P08754 354 aa17.51■□□□□ 0.39
CUL1-201ENST00000325222 PLCB2Q00722 1185 aa17.51■□□□□ 0.39
CUL1-201ENST00000325222 KIAA1524Q8TCG1 905 aa17.51■□□□□ 0.39
CUL1-201ENST00000325222 OVOS2A0A0J9YW53 1432 aa17.51■□□□□ 0.39
CUL1-201ENST00000325222 OVOS2Q6IE36 1432 aa17.51■□□□□ 0.39
CUL1-201ENST00000325222 NUTM2FA1L443 756 aa17.51■□□□□ 0.39
CUL1-201ENST00000325222 DNM1Q05193 864 aaKnown RBP17.5■□□□□ 0.39
CUL1-201ENST00000325222 ST3GAL1Q11201 340 aa17.49■□□□□ 0.39
CUL1-201ENST00000325222 STK31Q9BXU1 1019 aa17.49■□□□□ 0.39
CUL1-201ENST00000325222 SPG7Q9UQ90 795 aa17.49■□□□□ 0.39
CUL1-201ENST00000325222 KIF3AQ9Y496 699 aa17.49■□□□□ 0.39
CUL1-201ENST00000325222 ITSN1Q15811 1721 aa17.49■□□□□ 0.39
CUL1-201ENST00000325222 AEBP2Q6ZN18 517 aaPredicted RBP17.49■□□□□ 0.39
CUL1-201ENST00000325222 PLCD3Q8N3E9 789 aa17.49■□□□□ 0.39
CUL1-201ENST00000325222 SPC24Q8NBT2 197 aa17.49■□□□□ 0.39
CUL1-201ENST00000325222 LIMCH1Q9UPQ0 1083 aa17.49■□□□□ 0.39
CUL1-201ENST00000325222 SSH3Q8TE77 659 aa17.48■□□□□ 0.39
CUL1-201ENST00000325222 RTF1Q92541 710 aaKnown RBP17.48■□□□□ 0.39
CUL1-201ENST00000325222 MTMR6Q9Y217 621 aa17.48■□□□□ 0.39
CUL1-201ENST00000325222 ACEP12821 1306 aa17.48■□□□□ 0.39
CUL1-201ENST00000325222 AOX1Q06278 1338 aa17.48■□□□□ 0.39
CUL1-201ENST00000325222 SOS1Q07889 1333 aaPredicted RBP17.48■□□□□ 0.39
CUL1-201ENST00000325222 ARHGEF10O15013 1369 aa17.48■□□□□ 0.39
CUL1-201ENST00000325222 IGSF3O75054 1194 aa17.48■□□□□ 0.39
CUL1-201ENST00000325222 RIOK3O14730 519 aaKnown RBP17.47■□□□□ 0.39
CUL1-201ENST00000325222 LETM1O95202 739 aaPredicted RBP17.47■□□□□ 0.39
CUL1-201ENST00000325222 COL9A3Q14050 684 aaPredicted RBP17.47■□□□□ 0.39
CUL1-201ENST00000325222 UTP14CQ5TAP6 766 aaKnown RBP17.47■□□□□ 0.39
CUL1-201ENST00000325222 CCDC83Q8IWF9 413 aa17.47■□□□□ 0.39
CUL1-201ENST00000325222 MAPK8IP2Q13387 824 aaPredicted RBP17.46■□□□□ 0.39
CUL1-201ENST00000325222 ADCK5Q3MIX3 580 aa17.46■□□□□ 0.39
CUL1-201ENST00000325222 PPP1R42Q7Z4L9 355 aa17.46■□□□□ 0.39
CUL1-201ENST00000325222 HYPKQ9NX55 129 aa17.46■□□□□ 0.39
CUL1-201ENST00000325222 SMC3Q9UQE7 1217 aa17.46■□□□□ 0.39
CUL1-201ENST00000325222 DDX54Q8TDD1 881 aaKnown RBP17.46■□□□□ 0.39
CUL1-201ENST00000325222 EPB41L2O43491 1005 aaKnown RBP17.46■□□□□ 0.38
CUL1-201ENST00000325222 SURF6O75683 361 aaKnown RBP17.46■□□□□ 0.38
CUL1-201ENST00000325222 GJB2P29033 226 aa17.46■□□□□ 0.38
CUL1-201ENST00000325222 CWC27Q6UX04 472 aaKnown RBP17.46■□□□□ 0.38
CUL1-201ENST00000325222 RHPN1Q8TCX5 695 aa17.46■□□□□ 0.38
CUL1-201ENST00000325222 CEP170BQ9Y4F5 1589 aaPredicted RBP17.45■□□□□ 0.38
CUL1-201ENST00000325222 FAM208AQ9UK61 1670 aaKnown RBP17.45■□□□□ 0.38
CUL1-201ENST00000325222 SPDYE4A6NLX3 237 aa17.45■□□□□ 0.38
CUL1-201ENST00000325222 PTH1RQ03431 593 aa17.45■□□□□ 0.38
CUL1-201ENST00000325222 PHAXQ9H814 394 aaKnown RBP17.45■□□□□ 0.38
CUL1-201ENST00000325222 CASTP20810 708 aaKnown RBP17.45■□□□□ 0.38
CUL1-201ENST00000325222 CCDC30Q5VVM6 783 aa17.45■□□□□ 0.38
CUL1-201ENST00000325222 EYA1Q99502 592 aa17.45■□□□□ 0.38
CUL1-201ENST00000325222 UBTFL1P0CB47 393 aaPredicted RBP17.44■□□□□ 0.38
CUL1-201ENST00000325222 POLA2Q14181 598 aa17.44■□□□□ 0.38
CUL1-201ENST00000325222 SPATA31D1Q6ZQQ2 1576 aa17.44■□□□□ 0.38
CUL1-201ENST00000325222 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
CUL1-201ENST00000325222 ROBO2Q9HCK4 1378 aa17.44■□□□□ 0.38
CUL1-201ENST00000325222 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.44■□□□□ 0.38
CUL1-201ENST00000325222 FAM173BQ6P4H8 233 aa17.43■□□□□ 0.38
CUL1-201ENST00000325222 PTGS1P23219 599 aa17.42■□□□□ 0.38
CUL1-201ENST00000325222 NECAB1Q8N987 351 aa17.42■□□□□ 0.38
CUL1-201ENST00000325222 ANKRD7Q92527 254 aa17.42■□□□□ 0.38
CUL1-201ENST00000325222 KDRP35968 1356 aa17.42■□□□□ 0.38
CUL1-201ENST00000325222 U2AF2P26368 475 aaKnown RBP eCLIP17.42■□□□□ 0.381e-6■■□□□ 12.1
CUL1-201ENST00000325222 NBPF7P0C2Y1 421 aaPredicted RBP17.41■□□□□ 0.38
CUL1-201ENST00000325222 LIG1P18858 919 aa17.41■□□□□ 0.38
CUL1-201ENST00000325222 TTC6Q86TZ1 520 aa17.41■□□□□ 0.38
CUL1-201ENST00000325222 IL17REQ8NFR9 667 aa17.41■□□□□ 0.38
CUL1-201ENST00000325222 CHMP3Q9Y3E7 222 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms