RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 ZNF496Q96IT1 587 aaPredicted RBP24.9■■□□□ 1.58
PDZD3-201ENST00000322712 STRN4Q9NRL3 753 aa24.9■■□□□ 1.58
PDZD3-201ENST00000322712 MAP3K2Q9Y2U5 619 aa24.9■■□□□ 1.58
PDZD3-201ENST00000322712 PDIA6Q15084 440 aa24.89■■□□□ 1.58
PDZD3-201ENST00000322712 DCAF5Q96JK2 942 aa24.89■■□□□ 1.58
PDZD3-201ENST00000322712 PHLPP1O60346 1717 aa24.89■■□□□ 1.57
PDZD3-201ENST00000322712 AIMP1Q12904 312 aaKnown RBP24.89■■□□□ 1.57
PDZD3-201ENST00000322712 CHMP4AQ9BY43 222 aa24.89■■□□□ 1.57
PDZD3-201ENST00000322712 COL5A2P05997 1499 aaPredicted RBP24.89■■□□□ 1.57
PDZD3-201ENST00000322712 PKD1L3Q7Z443 1732 aa24.88■■□□□ 1.57
PDZD3-201ENST00000322712 C5P01031 1676 aa24.87■■□□□ 1.57
PDZD3-201ENST00000322712 PIP4K2AP48426 406 aaPredicted RBP24.87■■□□□ 1.57
PDZD3-201ENST00000322712 UBAP1LF5GYI3 381 aa24.86■■□□□ 1.57
PDZD3-201ENST00000322712 TSHZ3Q63HK5 1081 aa24.86■■□□□ 1.57
PDZD3-201ENST00000322712 LARP1Q6PKG0 1096 aaKnown RBP24.86■■□□□ 1.57
PDZD3-201ENST00000322712 MYL6BP14649 208 aa24.86■■□□□ 1.57
PDZD3-201ENST00000322712 CWF19L2Q2TBE0 894 aaKnown RBP24.86■■□□□ 1.57
PDZD3-201ENST00000322712 TBC1D2Q9BYX2 928 aa24.86■■□□□ 1.57
PDZD3-201ENST00000322712 PPP1R42Q7Z4L9 355 aa24.85■■□□□ 1.57
PDZD3-201ENST00000322712 KSR2Q6VAB6 950 aa24.85■■□□□ 1.57
PDZD3-201ENST00000322712 DDX21Q9NR30 783 aaKnown RBP eCLIP24.85■■□□□ 1.57
PDZD3-201ENST00000322712 HYPKQ9NX55 129 aa24.85■■□□□ 1.57
PDZD3-201ENST00000322712 USP16Q9Y5T5 823 aa24.85■■□□□ 1.57
PDZD3-201ENST00000322712 CABP4P57796 275 aa24.84■■□□□ 1.57
PDZD3-201ENST00000322712 COL16A1Q07092 1604 aaPredicted RBP24.84■■□□□ 1.57
PDZD3-201ENST00000322712 CDC45O75419 566 aa24.84■■□□□ 1.57
PDZD3-201ENST00000322712 EVA1CP58658 441 aa24.84■■□□□ 1.57
PDZD3-201ENST00000322712 LRRCC1Q9C099 1032 aa24.84■■□□□ 1.57
PDZD3-201ENST00000322712 USP35Q9P2H5 1018 aa24.84■■□□□ 1.57
PDZD3-201ENST00000322712 IBTKQ9P2D0 1353 aaPredicted RBP24.83■■□□□ 1.57
PDZD3-201ENST00000322712 SDSP20132 328 aa24.83■■□□□ 1.57
PDZD3-201ENST00000322712 BECN1Q14457 450 aa24.83■■□□□ 1.57
PDZD3-201ENST00000322712 ZCRB1Q8TBF4 217 aaKnown RBP24.83■■□□□ 1.57
PDZD3-201ENST00000322712 TTC5Q8N0Z6 440 aa24.82■■□□□ 1.56
PDZD3-201ENST00000322712 SSH3Q8TE77 659 aa24.82■■□□□ 1.56
PDZD3-201ENST00000322712 COL22A1Q8NFW1 1626 aaPredicted RBP24.82■■□□□ 1.56
PDZD3-201ENST00000322712 MRC1P22897 1456 aa24.82■■□□□ 1.56
PDZD3-201ENST00000322712 SRGAP3O43295 1099 aa24.81■■□□□ 1.56
PDZD3-201ENST00000322712 PDE1AP54750 535 aa24.81■■□□□ 1.56
PDZD3-201ENST00000322712 DDX54Q8TDD1 881 aaKnown RBP24.81■■□□□ 1.56
PDZD3-201ENST00000322712 BTG4Q9NY30 223 aa24.81■■□□□ 1.56
PDZD3-201ENST00000322712 HSP90AB1P08238 724 aaKnown RBP24.8■■□□□ 1.56
PDZD3-201ENST00000322712 RBM25P49756 843 aaKnown RBP24.8■■□□□ 1.56
PDZD3-201ENST00000322712 IL1RAPL2Q9NP60 686 aa24.8■■□□□ 1.56
PDZD3-201ENST00000322712 CARD10Q9BWT7 1032 aa24.79■■□□□ 1.56
PDZD3-201ENST00000322712 SLKQ9H2G2 1235 aaPredicted RBP24.79■■□□□ 1.56
PDZD3-201ENST00000322712 PCDH11XQ9BZA7 1347 aa24.79■■□□□ 1.56
PDZD3-201ENST00000322712 PCDH11YQ9BZA8 1340 aa24.79■■□□□ 1.56
PDZD3-201ENST00000322712 SURF6O75683 361 aaKnown RBP24.78■■□□□ 1.56
PDZD3-201ENST00000322712 SNRPA1P09661 255 aaKnown RBP24.78■■□□□ 1.56
PDZD3-201ENST00000322712 IL2RBP14784 551 aa24.78■■□□□ 1.56
PDZD3-201ENST00000322712 POLA2Q14181 598 aa24.78■■□□□ 1.56
PDZD3-201ENST00000322712 XAGE3Q8WTP9 111 aa24.78■■□□□ 1.56
PDZD3-201ENST00000322712 C9orf78Q9NZ63 289 aaPredicted RBP24.78■■□□□ 1.56
PDZD3-201ENST00000322712 SPRYD3Q8NCJ5 442 aa24.78■■□□□ 1.56
PDZD3-201ENST00000322712 SALL3Q9BXA9 1300 aa24.77■■□□□ 1.56
PDZD3-201ENST00000322712 PARP4Q9UKK3 1724 aaKnown RBP24.77■■□□□ 1.56
PDZD3-201ENST00000322712 COPS6Q7L5N1 327 aa24.77■■□□□ 1.56
PDZD3-201ENST00000322712 FMNL2Q96PY5 1086 aa24.77■■□□□ 1.56
PDZD3-201ENST00000322712 PLEKHG2Q9H7P9 1386 aa24.77■■□□□ 1.56
PDZD3-201ENST00000322712 RIC3Q7Z5B4 369 aa24.76■■□□□ 1.55
PDZD3-201ENST00000322712 KIF2CQ99661 725 aa24.76■■□□□ 1.55
PDZD3-201ENST00000322712 ADAMTS2O95450 1211 aa24.76■■□□□ 1.55
PDZD3-201ENST00000322712 LRP10Q7Z4F1 713 aa24.76■■□□□ 1.55
PDZD3-201ENST00000322712 OSBPL3Q9H4L5 887 aa24.76■■□□□ 1.55
PDZD3-201ENST00000322712 ALDH1L1O75891 902 aa24.75■■□□□ 1.55
PDZD3-201ENST00000322712 DDX58O95786 925 aaKnown RBP24.75■■□□□ 1.55
PDZD3-201ENST00000322712 IGKV5-2P06315 115 aa24.75■■□□□ 1.55
PDZD3-201ENST00000322712 COL14A1Q05707 1796 aaKnown RBP24.75■■□□□ 1.55
PDZD3-201ENST00000322712 MX1P20591 662 aa24.74■■□□□ 1.55
PDZD3-201ENST00000322712 NUTM2BA6NNL0 878 aaPredicted RBP24.74■■□□□ 1.55
PDZD3-201ENST00000322712 NUTM2EB1AL46 878 aaPredicted RBP24.74■■□□□ 1.55
PDZD3-201ENST00000322712 NUTM2AQ8IVF1 878 aaPredicted RBP24.74■■□□□ 1.55
PDZD3-201ENST00000322712 LINS1Q8NG48 757 aa24.74■■□□□ 1.55
PDZD3-201ENST00000322712 NUTM1Q86Y26 1132 aa24.73■■□□□ 1.55
PDZD3-201ENST00000322712 NFKBIBQ15653 356 aa24.72■■□□□ 1.55
PDZD3-201ENST00000322712 KAZALD1Q96I82 304 aa24.72■■□□□ 1.55
PDZD3-201ENST00000322712 GRM8O00222 908 aa24.71■■□□□ 1.55
PDZD3-201ENST00000322712 RBM42Q9BTD8 480 aaKnown RBP24.71■■□□□ 1.55
PDZD3-201ENST00000322712 GLI3P10071 1580 aa24.71■■□□□ 1.55
PDZD3-201ENST00000322712 SHANK3Q9BYB0 1731 aa24.71■■□□□ 1.55
PDZD3-201ENST00000322712 RHPN1Q8TCX5 695 aa24.71■■□□□ 1.55
PDZD3-201ENST00000322712 SUCLG2Q96I99 432 aa24.7■■□□□ 1.55
PDZD3-201ENST00000322712 MYD88Q99836 296 aa24.7■■□□□ 1.55
PDZD3-201ENST00000322712 PTCD1O75127 700 aaKnown RBP24.7■■□□□ 1.54
PDZD3-201ENST00000322712 PA2G4Q9UQ80 394 aaKnown RBP24.7■■□□□ 1.54
PDZD3-201ENST00000322712 NKX1-1Q15270 411 aaPredicted RBP24.69■■□□□ 1.54
PDZD3-201ENST00000322712 ANKRD13DQ6ZTN6 518 aa24.69■■□□□ 1.54
PDZD3-201ENST00000322712 CERKQ8TCT0 537 aa24.69■■□□□ 1.54
PDZD3-201ENST00000322712 JARID2Q92833 1246 aaPredicted RBP24.69■■□□□ 1.54
PDZD3-201ENST00000322712 ANTXR1Q9H6X2 564 aa24.69■■□□□ 1.54
PDZD3-201ENST00000322712 NEURL1BA8MQ27 555 aa24.68■■□□□ 1.54
PDZD3-201ENST00000322712 ERVV-2B6SEH9 535 aa24.68■■□□□ 1.54
PDZD3-201ENST00000322712 BICC1Q9H694 974 aaKnown RBP24.68■■□□□ 1.54
PDZD3-201ENST00000322712 RAB11FIP3O75154 756 aa24.67■■□□□ 1.54
PDZD3-201ENST00000322712 UNC5CLQ8IV45 518 aa24.67■■□□□ 1.54
PDZD3-201ENST00000322712 NBPF26B4DH59 902 aa24.67■■□□□ 1.54
PDZD3-201ENST00000322712 CD2BP2O95400 341 aaKnown RBP24.67■■□□□ 1.54
PDZD3-201ENST00000322712 MTX1Q13505 466 aa24.67■■□□□ 1.54
PDZD3-201ENST00000322712 NBPF14Q5TI25 921 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms