RNA–Protein interactions for RNA: ENST00000321517.3

LINC00476-201, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 1,269 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-201ENST00000321517 IL17REQ8NFR9 667 aa22.07■■□□□ 1.12
LINC00476-201ENST00000321517 BRCA1P38398 1863 aaKnown RBP22.07■■□□□ 1.12
LINC00476-201ENST00000321517 POLRMTO00411 1230 aaKnown RBP22.06■■□□□ 1.12
LINC00476-201ENST00000321517 ZBTB1Q9Y2K1 713 aa22.06■■□□□ 1.12
LINC00476-201ENST00000321517 U2SURPO15042 1029 aaKnown RBP22.05■■□□□ 1.12
LINC00476-201ENST00000321517 FCHSD2O94868 740 aa22.05■■□□□ 1.12
LINC00476-201ENST00000321517 ARHGAP27Q6ZUM4 889 aa22.05■■□□□ 1.12
LINC00476-201ENST00000321517 BCL2L12Q9HB09 334 aa22.05■■□□□ 1.12
LINC00476-201ENST00000321517 KIF3CO14782 793 aa22.04■■□□□ 1.12
LINC00476-201ENST00000321517 CHRNA5P30532 468 aa22.04■■□□□ 1.12
LINC00476-201ENST00000321517 NUDCQ9Y266 331 aa22.04■■□□□ 1.12
LINC00476-201ENST00000321517 ZPR1O75312 459 aa22.02■■□□□ 1.12
LINC00476-201ENST00000321517 PHACTR3Q96KR7 559 aa22.02■■□□□ 1.12
LINC00476-201ENST00000321517 NARFQ9UHQ1 456 aa22.02■■□□□ 1.12
LINC00476-201ENST00000321517 CCER2I3L3R5 266 aa22.01■■□□□ 1.11
LINC00476-201ENST00000321517 NFIXQ14938 502 aa22.01■■□□□ 1.11
LINC00476-201ENST00000321517 VSIG10Q8N0Z9 540 aa22.01■■□□□ 1.11
LINC00476-201ENST00000321517 PIM2Q9P1W9 311 aa22.01■■□□□ 1.11
LINC00476-201ENST00000321517 UBR2Q8IWV8 1755 aa22■■□□□ 1.11
LINC00476-201ENST00000321517 CANXP27824 592 aaKnown RBP22■■□□□ 1.11
LINC00476-201ENST00000321517 ZNF496Q96IT1 587 aaPredicted RBP22■■□□□ 1.11
LINC00476-201ENST00000321517 COL15A1P39059 1388 aa21.99■■□□□ 1.11
LINC00476-201ENST00000321517 GNAT3A8MTJ3 354 aa21.99■■□□□ 1.11
LINC00476-201ENST00000321517 KCNQ3O43525 872 aa21.98■■□□□ 1.11
LINC00476-201ENST00000321517 AFDNP55196 1824 aaKnown RBP21.98■■□□□ 1.11
LINC00476-201ENST00000321517 ARFGEF1Q9Y6D6 1849 aa21.98■■□□□ 1.11
LINC00476-201ENST00000321517 EIF5P55010 431 aaKnown RBP21.97■■□□□ 1.11
LINC00476-201ENST00000321517 DALRD3Q5D0E6 543 aaKnown RBP21.97■■□□□ 1.11
LINC00476-201ENST00000321517 ZNF790Q6PG37 636 aa21.97■■□□□ 1.11
LINC00476-201ENST00000321517 RSPH6AQ9H0K4 717 aa21.97■■□□□ 1.11
LINC00476-201ENST00000321517 C9orf131Q5VYM1 1079 aa21.96■■□□□ 1.11
LINC00476-201ENST00000321517 GAS2L2Q8NHY3 880 aa21.96■■□□□ 1.11
LINC00476-201ENST00000321517 SIPA1L3O60292 1781 aaPredicted RBP21.96■■□□□ 1.11
LINC00476-201ENST00000321517 PRKAR2BP31323 418 aa21.95■■□□□ 1.1
LINC00476-201ENST00000321517 TEFQ10587 303 aa21.95■■□□□ 1.1
LINC00476-201ENST00000321517 TTC5Q8N0Z6 440 aa21.95■■□□□ 1.1
LINC00476-201ENST00000321517 SERPINB2P05120 415 aa21.94■■□□□ 1.1
LINC00476-201ENST00000321517 HSPA6P17066 643 aa21.94■■□□□ 1.1
LINC00476-201ENST00000321517 PNNQ9H307 717 aaKnown RBP21.94■■□□□ 1.1
LINC00476-201ENST00000321517 NMRK2Q9NPI5 230 aa21.94■■□□□ 1.1
LINC00476-201ENST00000321517 HEG1Q9ULI3 1381 aa21.94■■□□□ 1.1
LINC00476-201ENST00000321517 NRXN2Q9P2S2 1712 aa21.94■■□□□ 1.1
LINC00476-201ENST00000321517 STARD3NLO95772 234 aa21.93■■□□□ 1.1
LINC00476-201ENST00000321517 CEMIPQ8WUJ3 1361 aa21.93■■□□□ 1.1
LINC00476-201ENST00000321517 A1BGP04217 495 aa21.92■■□□□ 1.1
LINC00476-201ENST00000321517 BICDL1Q6ZP65 573 aa21.92■■□□□ 1.1
LINC00476-201ENST00000321517 MRS2Q9HD23 443 aa21.92■■□□□ 1.1
LINC00476-201ENST00000321517 CARMIL3Q8ND23 1372 aa21.91■■□□□ 1.1
LINC00476-201ENST00000321517 TBC1D2BQ9UPU7 963 aa21.91■■□□□ 1.1
LINC00476-201ENST00000321517 SBF1O95248 1867 aa21.9■■□□□ 1.1
LINC00476-201ENST00000321517 PRELPP51888 382 aa21.9■■□□□ 1.1
LINC00476-201ENST00000321517 WDR43Q15061 677 aaKnown RBP eCLIP21.9■■□□□ 1.1
LINC00476-201ENST00000321517 TBC1D9BQ66K14 1250 aa21.9■■□□□ 1.1
LINC00476-201ENST00000321517 PRAMEF22A3QJZ6 481 aa21.89■■□□□ 1.09
LINC00476-201ENST00000321517 U2AF1L5P0DN76 240 aaPredicted RBP21.88■■□□□ 1.09
LINC00476-201ENST00000321517 U2AF1Q01081 240 aaKnown RBP eCLIP21.88■■□□□ 1.09
LINC00476-201ENST00000321517 MIER1Q8N108 512 aa21.88■■□□□ 1.09
LINC00476-201ENST00000321517 CCDC24Q8N4L8 307 aa21.88■■□□□ 1.09
LINC00476-201ENST00000321517 FMNL2Q96PY5 1086 aa21.88■■□□□ 1.09
LINC00476-201ENST00000321517 RNF181Q9P0P0 153 aa21.88■■□□□ 1.09
LINC00476-201ENST00000321517 USP16Q9Y5T5 823 aa21.88■■□□□ 1.09
LINC00476-201ENST00000321517 BTBD11A6QL63 1104 aa21.87■■□□□ 1.09
LINC00476-201ENST00000321517 PIP4K2AP48426 406 aaPredicted RBP21.87■■□□□ 1.09
LINC00476-201ENST00000321517 RASSF7Q02833 373 aa21.87■■□□□ 1.09
LINC00476-201ENST00000321517 DCTN1Q14203 1278 aa21.87■■□□□ 1.09
LINC00476-201ENST00000321517 MCM10Q7L590 875 aa21.87■■□□□ 1.09
LINC00476-201ENST00000321517 TEX13AQ9BXU3 409 aaPredicted RBP21.87■■□□□ 1.09
LINC00476-201ENST00000321517 ZNF330Q9Y3S2 320 aaPredicted RBP21.87■■□□□ 1.09
LINC00476-201ENST00000321517 A0A087WZG4 1122 aa21.86■■□□□ 1.09
LINC00476-201ENST00000321517 TOMM70O94826 608 aa21.86■■□□□ 1.09
LINC00476-201ENST00000321517 IL6STP40189 918 aaPredicted RBP21.86■■□□□ 1.09
LINC00476-201ENST00000321517 C2CD5Q86YS7 1000 aa21.86■■□□□ 1.09
LINC00476-201ENST00000321517 NEFMP07197 916 aa21.85■■□□□ 1.09
LINC00476-201ENST00000321517 ANKRD31Q8N7Z5 1873 aa21.84■■□□□ 1.09
LINC00476-201ENST00000321517 CAMTA2O94983 1202 aa21.84■■□□□ 1.09
LINC00476-201ENST00000321517 PNISRQ8TF01 805 aaKnown RBP21.84■■□□□ 1.09
LINC00476-201ENST00000321517 PRR5LQ6MZQ0 368 aa21.83■■□□□ 1.09
LINC00476-201ENST00000321517 TTLL6Q8N841 843 aa21.83■■□□□ 1.09
LINC00476-201ENST00000321517 DLEC1Q9Y238 1755 aa21.83■■□□□ 1.09
LINC00476-201ENST00000321517 H0YIN7 160 aa21.82■■□□□ 1.08
LINC00476-201ENST00000321517 RRAGCQ9HB90 399 aa21.82■■□□□ 1.08
LINC00476-201ENST00000321517 SCN7AQ01118 1682 aa21.81■■□□□ 1.08
LINC00476-201ENST00000321517 NFKBIEO00221 500 aa21.8■■□□□ 1.08
LINC00476-201ENST00000321517 CCDC184Q52MB2 194 aa21.8■■□□□ 1.08
LINC00476-201ENST00000321517 MIS18AQ9NYP9 233 aa21.8■■□□□ 1.08
LINC00476-201ENST00000321517 NBPF26B4DH59 902 aa21.79■■□□□ 1.08
LINC00476-201ENST00000321517 NBPF10Q6P3W6 841 aaKnown RBP21.79■■□□□ 1.08
LINC00476-201ENST00000321517 DZIP3Q86Y13 1208 aaKnown RBP21.79■■□□□ 1.08
LINC00476-201ENST00000321517 NBPF15Q8N660 670 aa21.79■■□□□ 1.08
LINC00476-201ENST00000321517 DNAJC5GQ8N7S2 189 aa21.79■■□□□ 1.08
LINC00476-201ENST00000321517 BRIP1Q9BX63 1249 aa21.79■■□□□ 1.08
LINC00476-201ENST00000321517 ADAMTS8Q9UP79 889 aa21.79■■□□□ 1.08
LINC00476-201ENST00000321517 CCDC88AQ3V6T2 1871 aa21.79■■□□□ 1.08
LINC00476-201ENST00000321517 RTF1Q92541 710 aaKnown RBP21.78■■□□□ 1.08
LINC00476-201ENST00000321517 ZNF622Q969S3 477 aaKnown RBP eCLIP21.78■■□□□ 1.08
LINC00476-201ENST00000321517 SNRPA1P09661 255 aaKnown RBP21.77■■□□□ 1.08
LINC00476-201ENST00000321517 LMNB1P20700 586 aa21.77■■□□□ 1.08
LINC00476-201ENST00000321517 RBM46Q8TBY0 533 aaKnown RBP21.77■■□□□ 1.08
LINC00476-201ENST00000321517 SETDB2Q96T68 719 aa21.77■■□□□ 1.08
LINC00476-201ENST00000321517 ZNF219Q9P2Y4 722 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms