RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 MINDY4BA8MYZ0 360 aa19.46■□□□□ 0.71
CLIP4-201ENST00000320081 HSP90AB3PQ58FF7 597 aa19.46■□□□□ 0.71
CLIP4-201ENST00000320081 ZBTB9Q96C00 473 aa19.46■□□□□ 0.71
CLIP4-201ENST00000320081 PRDM10Q9NQV6 1147 aa19.46■□□□□ 0.71
CLIP4-201ENST00000320081 CNPY2Q9Y2B0 182 aa19.46■□□□□ 0.71
CLIP4-201ENST00000320081 NAT10Q9H0A0 1025 aaKnown RBP19.46■□□□□ 0.71
CLIP4-201ENST00000320081 STX6O43752 255 aa19.46■□□□□ 0.71
CLIP4-201ENST00000320081 POLR3DP05423 398 aaPredicted RBP19.46■□□□□ 0.71
CLIP4-201ENST00000320081 PIP4K2BP78356 416 aa19.46■□□□□ 0.71
CLIP4-201ENST00000320081 ANKRD1Q15327 319 aa19.46■□□□□ 0.71
CLIP4-201ENST00000320081 IQSEC3Q9UPP2 1182 aaPredicted RBP19.46■□□□□ 0.71
CLIP4-201ENST00000320081 NDUFB9Q9Y6M9 179 aa19.46■□□□□ 0.71
CLIP4-201ENST00000320081 SART3Q15020 963 aaKnown RBP19.45■□□□□ 0.7
CLIP4-201ENST00000320081 MAP3K11Q16584 847 aa19.45■□□□□ 0.7
CLIP4-201ENST00000320081 ZSCAN23Q3MJ62 389 aa19.45■□□□□ 0.7
CLIP4-201ENST00000320081 XAGE3Q8WTP9 111 aa19.45■□□□□ 0.7
CLIP4-201ENST00000320081 LRP2BPQ9P2M1 347 aa19.45■□□□□ 0.7
CLIP4-201ENST00000320081 IPO7O95373 1038 aaKnown RBP19.45■□□□□ 0.7
CLIP4-201ENST00000320081 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
CLIP4-201ENST00000320081 PRIM1P49642 420 aaKnown RBP19.45■□□□□ 0.7
CLIP4-201ENST00000320081 NAP1L1P55209 391 aaKnown RBP19.45■□□□□ 0.7
CLIP4-201ENST00000320081 KRT28Q7Z3Y7 464 aa19.45■□□□□ 0.7
CLIP4-201ENST00000320081 UHRF1BP1Q6BDS2 1440 aa19.45■□□□□ 0.7
CLIP4-201ENST00000320081 AMOTL1Q8IY63 956 aa19.45■□□□□ 0.7
CLIP4-201ENST00000320081 DCTPP1Q9H773 170 aa19.45■□□□□ 0.7
CLIP4-201ENST00000320081 TRMT1Q9NXH9 659 aaKnown RBP19.45■□□□□ 0.7
CLIP4-201ENST00000320081 HSP90AA4PQ58FG1 418 aa19.44■□□□□ 0.7
CLIP4-201ENST00000320081 FAM173BQ6P4H8 233 aa19.44■□□□□ 0.7
CLIP4-201ENST00000320081 GOLGA6L1Q8N7Z2 621 aa19.44■□□□□ 0.7
CLIP4-201ENST00000320081 ESYT1Q9BSJ8 1104 aa19.44■□□□□ 0.7
CLIP4-201ENST00000320081 RAI14Q9P0K7 980 aa19.44■□□□□ 0.7
CLIP4-201ENST00000320081 ZNF396Q96N95 335 aaPredicted RBP19.44■□□□□ 0.7
CLIP4-201ENST00000320081 DUOX2Q9NRD8 1548 aa19.44■□□□□ 0.7
CLIP4-201ENST00000320081 KLHL34Q8N239 644 aa19.44■□□□□ 0.7
CLIP4-201ENST00000320081 BRF1Q92994 677 aa19.44■□□□□ 0.7
CLIP4-201ENST00000320081 NSD2O96028 1365 aa19.44■□□□□ 0.7
CLIP4-201ENST00000320081 ARHGAP45Q92619 1136 aa19.43■□□□□ 0.7
CLIP4-201ENST00000320081 KCNA6P17658 529 aa19.43■□□□□ 0.7
CLIP4-201ENST00000320081 PIK3C2GO75747 1445 aa19.43■□□□□ 0.7
CLIP4-201ENST00000320081 HOOK1Q9UJC3 728 aaKnown RBP19.42■□□□□ 0.7
CLIP4-201ENST00000320081 NFATC2IPQ8NCF5 419 aa19.42■□□□□ 0.7
CLIP4-201ENST00000320081 ZSCAN31Q96LW9 406 aaPredicted RBP19.42■□□□□ 0.7
CLIP4-201ENST00000320081 ADAMTS12P58397 1594 aa19.42■□□□□ 0.7
CLIP4-201ENST00000320081 KLHL10Q6JEL2 608 aa19.42■□□□□ 0.7
CLIP4-201ENST00000320081 TMX1Q9H3N1 280 aa19.42■□□□□ 0.7
CLIP4-201ENST00000320081 ABCC10Q5T3U5 1492 aa19.42■□□□□ 0.7
CLIP4-201ENST00000320081 IKQ13123 557 aaPredicted RBP19.42■□□□□ 0.7
CLIP4-201ENST00000320081 KLHL40Q2TBA0 621 aa19.42■□□□□ 0.7
CLIP4-201ENST00000320081 LETM1O95202 739 aaPredicted RBP19.41■□□□□ 0.7
CLIP4-201ENST00000320081 ANKRD20A12PQ8NF67 263 aa19.41■□□□□ 0.7
CLIP4-201ENST00000320081 C16orf45Q96MC5 204 aaPredicted RBP19.41■□□□□ 0.7
CLIP4-201ENST00000320081 AIDAQ96BJ3 306 aa19.41■□□□□ 0.7
CLIP4-201ENST00000320081 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.41■□□□□ 0.7
CLIP4-201ENST00000320081 PNMA6EA0A0J9YXQ4 647 aa19.41■□□□□ 0.7
CLIP4-201ENST00000320081 DNM1Q05193 864 aaKnown RBP19.41■□□□□ 0.7
CLIP4-201ENST00000320081 ZMYND15Q9H091 742 aa19.41■□□□□ 0.7
CLIP4-201ENST00000320081 TTC12Q9H892 705 aaPredicted RBP19.4■□□□□ 0.7
CLIP4-201ENST00000320081 CCDC69A6NI79 296 aa19.4■□□□□ 0.7
CLIP4-201ENST00000320081 ANKRD13DQ6ZTN6 518 aa19.4■□□□□ 0.7
CLIP4-201ENST00000320081 LGR6Q9HBX8 967 aa19.4■□□□□ 0.7
CLIP4-201ENST00000320081 MAGI2Q86UL8 1455 aa19.4■□□□□ 0.7
CLIP4-201ENST00000320081 LMBR1LQ6UX01 489 aa19.39■□□□□ 0.7
CLIP4-201ENST00000320081 TRMT112Q9UI30 125 aaKnown RBP19.39■□□□□ 0.69
CLIP4-201ENST00000320081 ADCY5O95622 1261 aa19.39■□□□□ 0.69
CLIP4-201ENST00000320081 USP48Q86UV5 1035 aa19.39■□□□□ 0.69
CLIP4-201ENST00000320081 MICU3Q86XE3 530 aa19.39■□□□□ 0.69
CLIP4-201ENST00000320081 RBM8AQ9Y5S9 174 aaKnown RBP19.39■□□□□ 0.69
CLIP4-201ENST00000320081 TRIM34Q9BYJ4 488 aa19.39■□□□□ 0.69
CLIP4-201ENST00000320081 CFAP45Q9UL16 551 aa19.39■□□□□ 0.69
CLIP4-201ENST00000320081 DHX8Q14562 1220 aaKnown RBP19.38■□□□□ 0.69
CLIP4-201ENST00000320081 AMOTQ4VCS5 1084 aa19.38■□□□□ 0.69
CLIP4-201ENST00000320081 DNMT1P26358 1616 aaKnown RBP19.38■□□□□ 0.69
CLIP4-201ENST00000320081 NUP160Q12769 1436 aa19.38■□□□□ 0.69
CLIP4-201ENST00000320081 ATP8B2P98198 1209 aa19.38■□□□□ 0.69
CLIP4-201ENST00000320081 CCDC183Q5T5S1 534 aa19.38■□□□□ 0.69
CLIP4-201ENST00000320081 MEX3CQ5U5Q3 659 aaKnown RBP19.38■□□□□ 0.69
CLIP4-201ENST00000320081 TRIM22Q8IYM9 498 aa19.38■□□□□ 0.69
CLIP4-201ENST00000320081 CCDC112Q8NEF3 446 aa19.38■□□□□ 0.69
CLIP4-201ENST00000320081 MSH6P52701 1360 aa19.38■□□□□ 0.69
CLIP4-201ENST00000320081 IL13P35225 146 aa19.38■□□□□ 0.69
CLIP4-201ENST00000320081 IMMTQ16891 758 aaKnown RBP19.38■□□□□ 0.69
CLIP4-201ENST00000320081 LDHAL6AQ6ZMR3 332 aa19.38■□□□□ 0.69
CLIP4-201ENST00000320081 RRAGDQ9NQL2 400 aaPredicted RBP19.38■□□□□ 0.69
CLIP4-201ENST00000320081 TMOD3Q9NYL9 352 aa19.38■□□□□ 0.69
CLIP4-201ENST00000320081 IFIT5Q13325 482 aaKnown RBP19.37■□□□□ 0.69
CLIP4-201ENST00000320081 CFAP100Q494V2 611 aa19.37■□□□□ 0.69
CLIP4-201ENST00000320081 HYPKQ9NX55 129 aa19.37■□□□□ 0.69
CLIP4-201ENST00000320081 XBP1P17861 261 aa19.37■□□□□ 0.69
CLIP4-201ENST00000320081 KRT32Q14532 448 aa19.37■□□□□ 0.69
CLIP4-201ENST00000320081 UBAC1Q9BSL1 405 aa19.37■□□□□ 0.69
CLIP4-201ENST00000320081 U3KPZ7 1027 aaPredicted RBP19.37■□□□□ 0.69
CLIP4-201ENST00000320081 TPM2P07951 284 aa19.37■□□□□ 0.69
CLIP4-201ENST00000320081 NBPF7P0C2Y1 421 aaPredicted RBP19.37■□□□□ 0.69
CLIP4-201ENST00000320081 CEP57L1Q8IYX8 460 aa19.37■□□□□ 0.69
CLIP4-201ENST00000320081 DDX17Q92841 729 aaKnown RBP19.37■□□□□ 0.69
CLIP4-201ENST00000320081 PKP1Q13835 747 aa19.36■□□□□ 0.69
CLIP4-201ENST00000320081 USP26Q9BXU7 913 aa19.36■□□□□ 0.69
CLIP4-201ENST00000320081 GOLGA8BA8MQT2 603 aa19.36■□□□□ 0.69
CLIP4-201ENST00000320081 EVI5LQ96CN4 794 aa19.36■□□□□ 0.69
CLIP4-201ENST00000320081 C8orf76Q96K31 380 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms