RNA–Protein interactions for RNA: ENST00000319380.11

UBE2O-201, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2O, Length 5,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-201ENST00000319380 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
UBE2O-201ENST00000319380 UBE4AQ14139 1066 aa20.37■□□□□ 0.85
UBE2O-201ENST00000319380 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
UBE2O-201ENST00000319380 HMGB1P09429 215 aaKnown RBP20.36■□□□□ 0.85
UBE2O-201ENST00000319380 GIMAP7Q8NHV1 300 aa20.36■□□□□ 0.85
UBE2O-201ENST00000319380 SLC12A7Q9Y666 1083 aa20.36■□□□□ 0.85
UBE2O-201ENST00000319380 HFM1A2PYH4 1435 aa20.36■□□□□ 0.85
UBE2O-201ENST00000319380 IFIT5Q13325 482 aaKnown RBP20.36■□□□□ 0.85
UBE2O-201ENST00000319380 EXOC6BQ9Y2D4 811 aa20.36■□□□□ 0.85
UBE2O-201ENST00000319380 YEATS4O95619 227 aa20.35■□□□□ 0.85
UBE2O-201ENST00000319380 CAMK4Q16566 473 aa20.35■□□□□ 0.85
UBE2O-201ENST00000319380 ATAD2Q6PL18 1390 aa20.35■□□□□ 0.85
UBE2O-201ENST00000319380 SLC5A1P13866 664 aa20.35■□□□□ 0.85
UBE2O-201ENST00000319380 RRS1Q15050 365 aaKnown RBP20.35■□□□□ 0.85
UBE2O-201ENST00000319380 STXBP4Q6ZWJ1 553 aa20.35■□□□□ 0.85
UBE2O-201ENST00000319380 TTC21AQ8NDW8 1320 aa20.35■□□□□ 0.85
UBE2O-201ENST00000319380 KIF18AQ8NI77 898 aa20.35■□□□□ 0.85
UBE2O-201ENST00000319380 PRPF40BQ6NWY9 871 aaKnown RBP20.35■□□□□ 0.85
UBE2O-201ENST00000319380 HOMER2Q9NSB8 354 aa20.35■□□□□ 0.85
UBE2O-201ENST00000319380 ANKRD18BA2A2Z9 1011 aa20.34■□□□□ 0.85
UBE2O-201ENST00000319380 ARHGAP5Q13017 1502 aa20.34■□□□□ 0.85
UBE2O-201ENST00000319380 LIG1P18858 919 aa20.34■□□□□ 0.85
UBE2O-201ENST00000319380 NAA15Q9BXJ9 866 aaKnown RBP20.34■□□□□ 0.85
UBE2O-201ENST00000319380 SH2B1Q9NRF2 756 aaPredicted RBP20.34■□□□□ 0.85
UBE2O-201ENST00000319380 MX1P20591 662 aa20.34■□□□□ 0.85
UBE2O-201ENST00000319380 MCM4P33991 863 aa20.34■□□□□ 0.85
UBE2O-201ENST00000319380 NLRP5P59047 1200 aa20.34■□□□□ 0.85
UBE2O-201ENST00000319380 RPGRQ92834 1020 aaKnown RBP20.34■□□□□ 0.85
UBE2O-201ENST00000319380 URI1O94763 535 aaPredicted RBP20.34■□□□□ 0.85
UBE2O-201ENST00000319380 DNA2P51530 1060 aa20.34■□□□□ 0.85
UBE2O-201ENST00000319380 NFE2L2Q16236 605 aa20.34■□□□□ 0.85
UBE2O-201ENST00000319380 CCDC12Q8WUD4 166 aaPredicted RBP20.34■□□□□ 0.85
UBE2O-201ENST00000319380 DNMBPQ6XZF7 1577 aa20.33■□□□□ 0.85
UBE2O-201ENST00000319380 CCDC175P0C221 793 aa20.33■□□□□ 0.85
UBE2O-201ENST00000319380 CASQ1P31415 396 aa20.33■□□□□ 0.85
UBE2O-201ENST00000319380 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.33■□□□□ 0.85
UBE2O-201ENST00000319380 FSD2A1L4K1 749 aa20.33■□□□□ 0.84
UBE2O-201ENST00000319380 XPCQ01831 940 aaPredicted RBP20.33■□□□□ 0.84
UBE2O-201ENST00000319380 NUP88Q99567 741 aaPredicted RBP20.33■□□□□ 0.84
UBE2O-201ENST00000319380 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.84
UBE2O-201ENST00000319380 FERP16591 822 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 ACTN2P35609 894 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 A0A087WZG4 1122 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 ERICH4A6NGS2 130 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 ESPNB1AK53 854 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 ZNF213O14771 459 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 AMPD3Q01432 767 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 BOLA2Q9H3K6 86 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 SSX2IPQ9Y2D8 614 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 TCERG1LQ5VWI1 586 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 CCDC82Q8N4S0 544 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 CATIPQ7Z7H3 387 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 TSNARE1Q96NA8 513 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 ALS2CR12Q96Q35 445 aa20.32■□□□□ 0.84
UBE2O-201ENST00000319380 CTAGE5O15320 804 aa20.31■□□□□ 0.84
UBE2O-201ENST00000319380 MTIF2P46199 727 aaKnown RBP20.31■□□□□ 0.84
UBE2O-201ENST00000319380 NBPF1Q3BBV0 1214 aa20.31■□□□□ 0.84
UBE2O-201ENST00000319380 CALML4Q96GE6 196 aa20.31■□□□□ 0.84
UBE2O-201ENST00000319380 TCP11L1Q9NUJ3 509 aa20.31■□□□□ 0.84
UBE2O-201ENST00000319380 SYCE3A1L190 88 aa20.31■□□□□ 0.84
UBE2O-201ENST00000319380 TRMT112Q9UI30 125 aaKnown RBP20.31■□□□□ 0.84
UBE2O-201ENST00000319380 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
UBE2O-201ENST00000319380 LDHCP07864 332 aa20.31■□□□□ 0.84
UBE2O-201ENST00000319380 SSRP1Q08945 709 aaKnown RBP20.31■□□□□ 0.84
UBE2O-201ENST00000319380 CCDC40Q4G0X9 1142 aa20.31■□□□□ 0.84
UBE2O-201ENST00000319380 DUSP27Q5VZP5 1158 aa20.31■□□□□ 0.84
UBE2O-201ENST00000319380 MICALCLQ6ZW33 695 aa20.31■□□□□ 0.84
UBE2O-201ENST00000319380 BACH2Q9BYV9 841 aa20.31■□□□□ 0.84
UBE2O-201ENST00000319380 IFIT3O14879 490 aaKnown RBP20.3■□□□□ 0.84
UBE2O-201ENST00000319380 HLTFQ14527 1009 aaKnown RBP eCLIP20.3■□□□□ 0.842e-7■■■□□ 16.7
UBE2O-201ENST00000319380 CNNM3Q8NE01 707 aa20.3■□□□□ 0.84
UBE2O-201ENST00000319380 GOLGA8AA7E2F4 631 aa20.3■□□□□ 0.84
UBE2O-201ENST00000319380 GOLGA8BA8MQT2 603 aa20.3■□□□□ 0.84
UBE2O-201ENST00000319380 TMCO5BA8MYB1 307 aa20.3■□□□□ 0.84
UBE2O-201ENST00000319380 PSMD1Q99460 953 aa20.3■□□□□ 0.84
UBE2O-201ENST00000319380 IDEP14735 1019 aa20.3■□□□□ 0.84
UBE2O-201ENST00000319380 MYD88Q99836 296 aa20.3■□□□□ 0.84
UBE2O-201ENST00000319380 BCCIPQ9P287 314 aaKnown RBP eCLIP20.3■□□□□ 0.84
UBE2O-201ENST00000319380 CABP5Q9NP86 173 aa20.3■□□□□ 0.84
UBE2O-201ENST00000319380 TNNT1P13805 278 aa20.29■□□□□ 0.84
UBE2O-201ENST00000319380 MPHOSPH6Q99547 160 aaKnown RBP20.29■□□□□ 0.84
UBE2O-201ENST00000319380 SPTY2D1Q68D10 685 aaPredicted RBP20.29■□□□□ 0.84
UBE2O-201ENST00000319380 PRKCSHP14314 528 aaPredicted RBP20.28■□□□□ 0.84
UBE2O-201ENST00000319380 CCDC61Q9Y6R9 512 aa20.28■□□□□ 0.84
UBE2O-201ENST00000319380 C6orf229H3BNL8 230 aa20.28■□□□□ 0.84
UBE2O-201ENST00000319380 KIF5BP33176 963 aa20.28■□□□□ 0.84
UBE2O-201ENST00000319380 CCDC183Q5T5S1 534 aa20.28■□□□□ 0.84
UBE2O-201ENST00000319380 PRC1O43663 620 aa20.28■□□□□ 0.84
UBE2O-201ENST00000319380 AMOTQ4VCS5 1084 aa20.28■□□□□ 0.84
UBE2O-201ENST00000319380 GIGYF2Q6Y7W6 1299 aaKnown RBP20.27■□□□□ 0.84
UBE2O-201ENST00000319380 ZSCAN30Q86W11 494 aa20.27■□□□□ 0.84
UBE2O-201ENST00000319380 RPGRIP1LQ68CZ1 1315 aa20.27■□□□□ 0.84
UBE2O-201ENST00000319380 POGZQ7Z3K3 1410 aa20.27■□□□□ 0.84
UBE2O-201ENST00000319380 PYM1Q9BRP8 204 aaKnown RBP20.27■□□□□ 0.84
UBE2O-201ENST00000319380 SYCP3Q8IZU3 236 aa20.27■□□□□ 0.84
UBE2O-201ENST00000319380 CPLX3Q8WVH0 158 aa20.27■□□□□ 0.83
UBE2O-201ENST00000319380 FAM114A1Q8IWE2 563 aa20.26■□□□□ 0.83
UBE2O-201ENST00000319380 CCDC174Q6PII3 467 aa20.26■□□□□ 0.83
UBE2O-201ENST00000319380 TMEM57Q8N5G2 664 aa20.26■□□□□ 0.83
UBE2O-201ENST00000319380 PRPF4BQ13523 1007 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms