RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 NOB1Q9ULX3 412 aaKnown RBP19.74■□□□□ 0.75
PDLIM5-202ENST00000318007 CCNL1Q9UK58 526 aaPredicted RBP19.73■□□□□ 0.75
PDLIM5-202ENST00000318007 RRP1P56182 461 aaKnown RBP19.72■□□□□ 0.75
PDLIM5-202ENST00000318007 AIMP1Q12904 312 aaKnown RBP19.72■□□□□ 0.75
PDLIM5-202ENST00000318007 MRPL50Q8N5N7 158 aaKnown RBP19.72■□□□□ 0.75
PDLIM5-202ENST00000318007 C20orf194Q5TEA3 1177 aa19.72■□□□□ 0.75
PDLIM5-202ENST00000318007 ARXQ96QS3 562 aa19.72■□□□□ 0.75
PDLIM5-202ENST00000318007 ALDH1L2Q3SY69 923 aa19.71■□□□□ 0.75
PDLIM5-202ENST00000318007 SMIM5Q71RC9 77 aa19.71■□□□□ 0.75
PDLIM5-202ENST00000318007 HOXB7P09629 217 aa19.7■□□□□ 0.74
PDLIM5-202ENST00000318007 TJP1Q07157 1748 aa19.7■□□□□ 0.74
PDLIM5-202ENST00000318007 ZNF428Q96B54 188 aa19.7■□□□□ 0.74
PDLIM5-202ENST00000318007 LAMB4A4D0S4 1761 aa19.69■□□□□ 0.74
PDLIM5-202ENST00000318007 LINC00116Q8NCU8 138 aa19.69■□□□□ 0.74
PDLIM5-202ENST00000318007 LRRC4BQ9NT99 713 aa19.69■□□□□ 0.74
PDLIM5-202ENST00000318007 DBF4Q9UBU7 674 aaPredicted RBP19.69■□□□□ 0.74
PDLIM5-202ENST00000318007 ZBTB1Q9Y2K1 713 aa19.69■□□□□ 0.74
PDLIM5-202ENST00000318007 NBPF26B4DH59 902 aa19.68■□□□□ 0.74
PDLIM5-202ENST00000318007 STARD3NLO95772 234 aa19.68■□□□□ 0.74
PDLIM5-202ENST00000318007 CYP19A1P11511 503 aaPredicted RBP19.68■□□□□ 0.74
PDLIM5-202ENST00000318007 PDIA6Q15084 440 aa19.68■□□□□ 0.74
PDLIM5-202ENST00000318007 NBPF14Q5TI25 921 aa19.68■□□□□ 0.74
PDLIM5-202ENST00000318007 NBPF10Q6P3W6 841 aaKnown RBP19.68■□□□□ 0.74
PDLIM5-202ENST00000318007 VSIG10Q8N0Z9 540 aa19.68■□□□□ 0.74
PDLIM5-202ENST00000318007 NBPF15Q8N660 670 aa19.68■□□□□ 0.74
PDLIM5-202ENST00000318007 FKBP5Q13451 457 aaPredicted RBP19.68■□□□□ 0.74
PDLIM5-202ENST00000318007 F6X3S4 739 aa19.67■□□□□ 0.74
PDLIM5-202ENST00000318007 CRKLP46109 303 aaKnown RBP19.67■□□□□ 0.74
PDLIM5-202ENST00000318007 EN1Q05925 392 aaPredicted RBP19.67■□□□□ 0.74
PDLIM5-202ENST00000318007 FLIIQ13045 1269 aa19.67■□□□□ 0.74
PDLIM5-202ENST00000318007 TNS1Q9HBL0 1735 aaKnown RBP19.67■□□□□ 0.74
PDLIM5-202ENST00000318007 DEFB132Q7Z7B7 95 aa19.66■□□□□ 0.74
PDLIM5-202ENST00000318007 PANK1Q8TE04 598 aa19.66■□□□□ 0.74
PDLIM5-202ENST00000318007 KIF16BQ96L93 1317 aa19.66■□□□□ 0.74
PDLIM5-202ENST00000318007 TRIM27P14373 513 aa19.66■□□□□ 0.74
PDLIM5-202ENST00000318007 TXNRD1Q16881 649 aa19.65■□□□□ 0.74
PDLIM5-202ENST00000318007 PROM2Q8N271 834 aa19.65■□□□□ 0.74
PDLIM5-202ENST00000318007 DDX21Q9NR30 783 aaKnown RBP eCLIP19.65■□□□□ 0.74
PDLIM5-202ENST00000318007 LY75O60449 1722 aa19.65■□□□□ 0.74
PDLIM5-202ENST00000318007 SOS1Q07889 1333 aaPredicted RBP19.65■□□□□ 0.74
PDLIM5-202ENST00000318007 SF3B2Q13435 895 aaKnown RBP19.64■□□□□ 0.74
PDLIM5-202ENST00000318007 ZKSCAN2Q63HK3 967 aa19.64■□□□□ 0.74
PDLIM5-202ENST00000318007 SLC4A10Q6U841 1118 aa19.64■□□□□ 0.74
PDLIM5-202ENST00000318007 COPS6Q7L5N1 327 aa19.64■□□□□ 0.74
PDLIM5-202ENST00000318007 XAGE3Q8WTP9 111 aa19.64■□□□□ 0.74
PDLIM5-202ENST00000318007 TEX13AQ9BXU3 409 aaPredicted RBP19.64■□□□□ 0.74
PDLIM5-202ENST00000318007 RLBP1P12271 317 aa19.64■□□□□ 0.73
PDLIM5-202ENST00000318007 EZH2Q15910 746 aaKnown RBP19.64■□□□□ 0.73
PDLIM5-202ENST00000318007 FTSJ3Q8IY81 847 aaKnown RBP19.64■□□□□ 0.73
PDLIM5-202ENST00000318007 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.64■□□□□ 0.73
PDLIM5-202ENST00000318007 ATF7IPQ6VMQ6 1270 aa19.63■□□□□ 0.73
PDLIM5-202ENST00000318007 PHF14O94880 888 aa19.63■□□□□ 0.73
PDLIM5-202ENST00000318007 INTS5Q6P9B9 1019 aaKnown RBP19.63■□□□□ 0.73
PDLIM5-202ENST00000318007 CCDC87Q9NVE4 849 aa19.63■□□□□ 0.73
PDLIM5-202ENST00000318007 FKBP8Q14318 412 aa19.62■□□□□ 0.73
PDLIM5-202ENST00000318007 TTLL7Q6ZT98 887 aa19.62■□□□□ 0.73
PDLIM5-202ENST00000318007 HYPKQ9NX55 129 aa19.62■□□□□ 0.73
PDLIM5-202ENST00000318007 MYH14Q7Z406 1995 aaKnown RBP19.61■□□□□ 0.73
PDLIM5-202ENST00000318007 GNPATO15228 680 aa19.61■□□□□ 0.73
PDLIM5-202ENST00000318007 NEFLP07196 543 aa19.61■□□□□ 0.73
PDLIM5-202ENST00000318007 AMIGO3Q86WK7 504 aa19.61■□□□□ 0.73
PDLIM5-202ENST00000318007 ZBTB3Q9H5J0 574 aa19.61■□□□□ 0.73
PDLIM5-202ENST00000318007 COL5A3P25940 1745 aaPredicted RBP19.61■□□□□ 0.73
PDLIM5-202ENST00000318007 PI4KAP2A4QPH2 592 aa19.61■□□□□ 0.73
PDLIM5-202ENST00000318007 ILDR2Q71H61 639 aa19.61■□□□□ 0.73
PDLIM5-202ENST00000318007 LRP10Q7Z4F1 713 aa19.61■□□□□ 0.73
PDLIM5-202ENST00000318007 PI4KAP1Q8N8J0 262 aa19.61■□□□□ 0.73
PDLIM5-202ENST00000318007 COG6Q9Y2V7 657 aa19.61■□□□□ 0.73
PDLIM5-202ENST00000318007 IPO8O15397 1037 aaKnown RBP19.6■□□□□ 0.73
PDLIM5-202ENST00000318007 NPM2Q86SE8 214 aaKnown RBP19.6■□□□□ 0.73
PDLIM5-202ENST00000318007 TBC1D2BQ9UPU7 963 aa19.6■□□□□ 0.73
PDLIM5-202ENST00000318007 RNF123Q5XPI4 1314 aa19.6■□□□□ 0.73
PDLIM5-202ENST00000318007 DZIP1LQ8IYY4 767 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-202ENST00000318007 CHMP4AQ9BY43 222 aa19.59■□□□□ 0.73
PDLIM5-202ENST00000318007 PLSCR1O15162 318 aa19.59■□□□□ 0.73
PDLIM5-202ENST00000318007 AK7Q96M32 723 aa19.59■□□□□ 0.73
PDLIM5-202ENST00000318007 MAP3K2Q9Y2U5 619 aa19.59■□□□□ 0.73
PDLIM5-202ENST00000318007 TAF1LQ8IZX4 1826 aa19.58■□□□□ 0.73
PDLIM5-202ENST00000318007 RIC3Q7Z5B4 369 aa19.58■□□□□ 0.73
PDLIM5-202ENST00000318007 ITPRIPQ8IWB1 547 aa19.58■□□□□ 0.73
PDLIM5-202ENST00000318007 TMEM57Q8N5G2 664 aa19.58■□□□□ 0.73
PDLIM5-202ENST00000318007 CRBNQ96SW2 442 aa19.58■□□□□ 0.73
PDLIM5-202ENST00000318007 C4BP0C0L5 1744 aa19.58■□□□□ 0.72
PDLIM5-202ENST00000318007 PTPRCP08575 1304 aa19.57■□□□□ 0.72
PDLIM5-202ENST00000318007 BRPF1P55201 1214 aaPredicted RBP19.57■□□□□ 0.72
PDLIM5-202ENST00000318007 BAG6P46379 1132 aa19.57■□□□□ 0.72
PDLIM5-202ENST00000318007 SLC27A3Q5K4L6 730 aa19.57■□□□□ 0.72
PDLIM5-202ENST00000318007 ADCY9O60503 1353 aa19.56■□□□□ 0.72
PDLIM5-202ENST00000318007 API5Q9BZZ5 524 aaKnown RBP19.56■□□□□ 0.72
PDLIM5-202ENST00000318007 ERBB4Q15303 1308 aa19.56■□□□□ 0.72
PDLIM5-202ENST00000318007 ZNF827Q17R98 1081 aa19.55■□□□□ 0.72
PDLIM5-202ENST00000318007 ANKRD13DQ6ZTN6 518 aa19.55■□□□□ 0.72
PDLIM5-202ENST00000318007 EXOC6Q8TAG9 804 aa19.55■□□□□ 0.72
PDLIM5-202ENST00000318007 CAMKK2Q96RR4 588 aa19.55■□□□□ 0.72
PDLIM5-202ENST00000318007 GTF3C3Q9Y5Q9 886 aa19.55■□□□□ 0.72
PDLIM5-202ENST00000318007 DZIP3Q86Y13 1208 aaKnown RBP19.55■□□□□ 0.72
PDLIM5-202ENST00000318007 COL15A1P39059 1388 aa19.54■□□□□ 0.72
PDLIM5-202ENST00000318007 CNTNAP4Q9C0A0 1308 aa19.54■□□□□ 0.72
PDLIM5-202ENST00000318007 DDX58O95786 925 aaKnown RBP19.54■□□□□ 0.72
PDLIM5-202ENST00000318007 IL6STP40189 918 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms