RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 EMILIN1Q9Y6C2 1016 aa8.96□□□□□ -0.98
CDHR3-201ENST00000317716 BLMP54132 1417 aaPredicted RBP8.96□□□□□ -0.98
CDHR3-201ENST00000317716 IFIT2P09913 472 aaKnown RBP8.95□□□□□ -0.98
CDHR3-201ENST00000317716 KRT28Q7Z3Y7 464 aa8.95□□□□□ -0.98
CDHR3-201ENST00000317716 MCM5P33992 734 aa8.95□□□□□ -0.98
CDHR3-201ENST00000317716 EVA1CP58658 441 aa8.95□□□□□ -0.98
CDHR3-201ENST00000317716 CADPS2Q86UW7 1296 aa8.95□□□□□ -0.98
CDHR3-201ENST00000317716 LRRCC1Q9C099 1032 aa8.95□□□□□ -0.98
CDHR3-201ENST00000317716 SYNMO15061 1565 aa8.95□□□□□ -0.98
CDHR3-201ENST00000317716 ARHGAP31Q2M1Z3 1444 aa8.95□□□□□ -0.98
CDHR3-201ENST00000317716 PES1O00541 588 aaKnown RBP8.95□□□□□ -0.98
CDHR3-201ENST00000317716 UBTFL1P0CB47 393 aaPredicted RBP8.95□□□□□ -0.98
CDHR3-201ENST00000317716 MCM2P49736 904 aa8.95□□□□□ -0.98
CDHR3-201ENST00000317716 MAP3K11Q16584 847 aa8.95□□□□□ -0.98
CDHR3-201ENST00000317716 CCDC73Q6ZRK6 1079 aa8.95□□□□□ -0.98
CDHR3-201ENST00000317716 PRIMPOLQ96LW4 560 aa8.95□□□□□ -0.98
CDHR3-201ENST00000317716 ZBTB22O15209 634 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 TPM4P67936 248 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 DNM1Q05193 864 aaKnown RBP8.94□□□□□ -0.98
CDHR3-201ENST00000317716 PLEKHM2Q8IWE5 1019 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 SLAIN2Q9P270 581 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 CLIP2Q9UDT6 1046 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 ZNF445P59923 1031 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 KRT85P78386 507 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 LUZP1Q86V48 1076 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 MYRIPQ8NFW9 859 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 SPATA32Q96LK8 384 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 PREX1Q8TCU6 1659 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 GNAI2P04899 355 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 PTPN14Q15678 1187 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 PRPF40BQ6NWY9 871 aaKnown RBP8.94□□□□□ -0.98
CDHR3-201ENST00000317716 C8orf58Q8NAV2 365 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 C9orf78Q9NZ63 289 aaPredicted RBP8.94□□□□□ -0.98
CDHR3-201ENST00000317716 MYO5BQ9ULV0 1848 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 NLRP1Q9C000 1473 aa8.94□□□□□ -0.98
CDHR3-201ENST00000317716 EIF2AK4Q9P2K8 1649 aaKnown RBP8.93□□□□□ -0.98
CDHR3-201ENST00000317716 TOM1O60784 492 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 CT47B1P0C2W7 299 aaPredicted RBP8.93□□□□□ -0.98
CDHR3-201ENST00000317716 IBSPP21815 317 aaPredicted RBP8.93□□□□□ -0.98
CDHR3-201ENST00000317716 GUCY1B3Q02153 619 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 USHBP1Q8N6Y0 703 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 GPATCH3Q96I76 525 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 USP26Q9BXU7 913 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 SIL1Q9H173 461 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 ZNF521Q96K83 1311 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 BCORL1Q5H9F3 1711 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 ISM2Q6H9L7 571 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 GTF3C6Q969F1 213 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 ZSWIM4Q9H7M6 989 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 MBIPQ9NS73 344 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 NLRP2Q9NX02 1062 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 LETM1O95202 739 aaPredicted RBP8.93□□□□□ -0.98
CDHR3-201ENST00000317716 MX1P20591 662 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 AIMP1Q12904 312 aaKnown RBP8.93□□□□□ -0.98
CDHR3-201ENST00000317716 GOLGA6L1Q8N7Z2 621 aa8.93□□□□□ -0.98
CDHR3-201ENST00000317716 C3P01024 1663 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 STX6O43752 255 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 CERS3Q8IU89 383 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 KINO60870 393 aaKnown RBP8.92□□□□□ -0.98
CDHR3-201ENST00000317716 LRMPQ12912 555 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 NFE2L2Q16236 605 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 RUFY2Q8WXA3 655 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 PRDM11Q9NQV5 511 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 PDRG1Q9NUG6 133 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 ARGLU1Q9NWB6 273 aaPredicted RBP8.92□□□□□ -0.98
CDHR3-201ENST00000317716 PLEKHG1Q9ULL1 1385 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 BIN1O00499 593 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 TPM3P06753 285 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 GSPT1P15170 499 aaKnown RBP8.92□□□□□ -0.98
CDHR3-201ENST00000317716 GJB2P29033 226 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 GPS2Q13227 327 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 HS1BP3Q53T59 392 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 CYP46A1Q9Y6A2 500 aa8.92□□□□□ -0.98
CDHR3-201ENST00000317716 ZNF500O60304 480 aaPredicted RBP8.91□□□□□ -0.98
CDHR3-201ENST00000317716 ATP2B1P20020 1258 aa8.91□□□□□ -0.98
CDHR3-201ENST00000317716 ME1P48163 572 aa8.91□□□□□ -0.98
CDHR3-201ENST00000317716 PHACTR3Q96KR7 559 aa8.91□□□□□ -0.98
CDHR3-201ENST00000317716 FSD1Q9BTV5 496 aa8.91□□□□□ -0.98
CDHR3-201ENST00000317716 ZNF165P49910 485 aa8.91□□□□□ -0.98
CDHR3-201ENST00000317716 ANO6Q4KMQ2 910 aa8.91□□□□□ -0.98
CDHR3-201ENST00000317716 CNTROBQ8N137 903 aa8.91□□□□□ -0.98
CDHR3-201ENST00000317716 DNAJC25Q9H1X3 360 aa8.91□□□□□ -0.98
CDHR3-201ENST00000317716 SRGAP3O43295 1099 aa8.91□□□□□ -0.98
CDHR3-201ENST00000317716 URI1O94763 535 aaPredicted RBP8.91□□□□□ -0.98
CDHR3-201ENST00000317716 NAA30Q147X3 362 aaPredicted RBP8.91□□□□□ -0.98
CDHR3-201ENST00000317716 HSP90AA4PQ58FG1 418 aa8.91□□□□□ -0.98
CDHR3-201ENST00000317716 RPAP2Q8IXW5 612 aaPredicted RBP8.91□□□□□ -0.98
CDHR3-201ENST00000317716 PYCARDQ9ULZ3 195 aa8.91□□□□□ -0.98
CDHR3-201ENST00000317716 ASXL1Q8IXJ9 1541 aa8.9□□□□□ -0.98
CDHR3-201ENST00000317716 ATP2B3Q16720 1220 aa8.9□□□□□ -0.98
CDHR3-201ENST00000317716 TRMT2AQ8IZ69 625 aaKnown RBP8.9□□□□□ -0.98
CDHR3-201ENST00000317716 PIBF1Q8WXW3 757 aa8.9□□□□□ -0.98
CDHR3-201ENST00000317716 TRIM34Q9BYJ4 488 aa8.9□□□□□ -0.98
CDHR3-201ENST00000317716 CEP170BQ9Y4F5 1589 aaPredicted RBP8.9□□□□□ -0.98
CDHR3-201ENST00000317716 PRR36Q9H6K5 1346 aa8.9□□□□□ -0.98
CDHR3-201ENST00000317716 ZBTB7BO15156 539 aaPredicted RBP8.9□□□□□ -0.98
CDHR3-201ENST00000317716 CEP135Q66GS9 1140 aa8.9□□□□□ -0.98
CDHR3-201ENST00000317716 C8orf37Q96NL8 207 aa8.9□□□□□ -0.98
CDHR3-201ENST00000317716 GTPBP4Q9BZE4 634 aaKnown RBP8.9□□□□□ -0.98
CDHR3-201ENST00000317716 SRCIN1Q9C0H9 1055 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms