RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 GADD45BO75293 160 aaPredicted RBP23.09■■□□□ 1.29
RTN4-201ENST00000317610 POLA2Q14181 598 aa23.09■■□□□ 1.29
RTN4-201ENST00000317610 ESF1Q9H501 851 aaKnown RBP23.09■■□□□ 1.29
RTN4-201ENST00000317610 RAD50Q92878 1312 aa23.09■■□□□ 1.29
RTN4-201ENST00000317610 UBTFL1P0CB47 393 aaPredicted RBP23.09■■□□□ 1.29
RTN4-201ENST00000317610 UVSSAQ2YD98 709 aa23.09■■□□□ 1.29
RTN4-201ENST00000317610 FAM184AQ8NB25 1140 aa23.09■■□□□ 1.29
RTN4-201ENST00000317610 AMPHP49418 695 aa23.08■■□□□ 1.29
RTN4-201ENST00000317610 MAP7D2Q96T17 732 aa23.08■■□□□ 1.29
RTN4-201ENST00000317610 PI4K2BQ8TCG2 481 aa23.08■■□□□ 1.28
RTN4-201ENST00000317610 TTC14Q96N46 770 aa23.08■■□□□ 1.28
RTN4-201ENST00000317610 MAP3K5Q99683 1374 aa23.08■■□□□ 1.28
RTN4-201ENST00000317610 SGSM2O43147 1006 aa23.07■■□□□ 1.28
RTN4-201ENST00000317610 CYB5RLQ6IPT4 315 aa23.07■■□□□ 1.28
RTN4-201ENST00000317610 IL1RAPL2Q9NP60 686 aa23.07■■□□□ 1.28
RTN4-201ENST00000317610 UQCRHLA0A096LP55 91 aa23.06■■□□□ 1.28
RTN4-201ENST00000317610 UQCRHP07919 91 aa23.06■■□□□ 1.28
RTN4-201ENST00000317610 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
RTN4-201ENST00000317610 USP54Q70EL1 1684 aa23.06■■□□□ 1.28
RTN4-201ENST00000317610 GDPD2Q9HCC8 539 aa23.05■■□□□ 1.28
RTN4-201ENST00000317610 MARF1Q9Y4F3 1742 aaKnown RBP23.05■■□□□ 1.28
RTN4-201ENST00000317610 TAF7Q15545 349 aaPredicted RBP23.05■■□□□ 1.28
RTN4-201ENST00000317610 SASS6Q6UVJ0 657 aa23.05■■□□□ 1.28
RTN4-201ENST00000317610 NUTM1Q86Y26 1132 aa23.05■■□□□ 1.28
RTN4-201ENST00000317610 KLHL34Q8N239 644 aa23.05■■□□□ 1.28
RTN4-201ENST00000317610 NECTIN2Q92692 538 aa23.05■■□□□ 1.28
RTN4-201ENST00000317610 SNX14Q9Y5W7 946 aa23.05■■□□□ 1.28
RTN4-201ENST00000317610 RGPD8O14715 1765 aaPredicted RBP23.05■■□□□ 1.28
RTN4-201ENST00000317610 LSG1Q9H089 658 aaKnown RBP23.04■■□□□ 1.28
RTN4-201ENST00000317610 DYNC1I1O14576 645 aa23.04■■□□□ 1.28
RTN4-201ENST00000317610 CCDC183Q5T5S1 534 aa23.04■■□□□ 1.28
RTN4-201ENST00000317610 PPP1R42Q7Z4L9 355 aa23.04■■□□□ 1.28
RTN4-201ENST00000317610 RHPN1Q8TCX5 695 aa23.04■■□□□ 1.28
RTN4-201ENST00000317610 DIP2AQ14689 1571 aa23.04■■□□□ 1.28
RTN4-201ENST00000317610 LTKP29376 864 aa23.03■■□□□ 1.28
RTN4-201ENST00000317610 ZSCAN22P10073 491 aaPredicted RBP23.03■■□□□ 1.28
RTN4-201ENST00000317610 ZMYND15Q9H091 742 aa23.03■■□□□ 1.28
RTN4-201ENST00000317610 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.03■■□□□ 1.285e-9■■■□□ 14.6
RTN4-201ENST00000317610 SURF6O75683 361 aaKnown RBP23.02■■□□□ 1.28
RTN4-201ENST00000317610 LETM1O95202 739 aaPredicted RBP23.02■■□□□ 1.28
RTN4-201ENST00000317610 KIAA2012Q0VF49 1180 aa23.02■■□□□ 1.28
RTN4-201ENST00000317610 USP42Q9H9J4 1324 aaKnown RBP23.02■■□□□ 1.28
RTN4-201ENST00000317610 KIF1BPQ96EK5 621 aa23.02■■□□□ 1.28
RTN4-201ENST00000317610 PTMAP06454 111 aaKnown RBP23.01■■□□□ 1.27
RTN4-201ENST00000317610 RBM10P98175 930 aaKnown RBP23.01■■□□□ 1.27
RTN4-201ENST00000317610 HOXC9P31274 260 aa23■■□□□ 1.27
RTN4-201ENST00000317610 CNTROBQ8N137 903 aa23■■□□□ 1.27
RTN4-201ENST00000317610 LIMCH1Q9UPQ0 1083 aa23■■□□□ 1.27
RTN4-201ENST00000317610 AK2P54819 239 aa23■■□□□ 1.27
RTN4-201ENST00000317610 FOXD4L6Q3SYB3 417 aaPredicted RBP23■■□□□ 1.27
RTN4-201ENST00000317610 HDGFL1Q5TGJ6 251 aa23■■□□□ 1.27
RTN4-201ENST00000317610 FOXD4L3Q6VB84 417 aaPredicted RBP23■■□□□ 1.27
RTN4-201ENST00000317610 UBE2HP62256 183 aa22.99■■□□□ 1.27
RTN4-201ENST00000317610 RUFY3Q7L099 469 aa22.99■■□□□ 1.27
RTN4-201ENST00000317610 NGDNQ8NEJ9 315 aaKnown RBP22.99■■□□□ 1.27
RTN4-201ENST00000317610 PHAXQ9H814 394 aaKnown RBP22.99■■□□□ 1.27
RTN4-201ENST00000317610 CNPY2Q9Y2B0 182 aa22.99■■□□□ 1.27
RTN4-201ENST00000317610 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.99■■□□□ 1.27
RTN4-201ENST00000317610 MED1Q15648 1581 aaPredicted RBP22.99■■□□□ 1.27
RTN4-201ENST00000317610 STX6O43752 255 aa22.98■■□□□ 1.27
RTN4-201ENST00000317610 MTERF4Q7Z6M4 381 aaKnown RBP22.98■■□□□ 1.27
RTN4-201ENST00000317610 RASEFQ8IZ41 740 aa22.98■■□□□ 1.27
RTN4-201ENST00000317610 MAP4K4O95819 1239 aaPredicted RBP22.98■■□□□ 1.27
RTN4-201ENST00000317610 SYT1P21579 422 aa22.98■■□□□ 1.27
RTN4-201ENST00000317610 FAM13BQ9NYF5 915 aa22.98■■□□□ 1.27
RTN4-201ENST00000317610 CEMIPQ8WUJ3 1361 aa22.97■■□□□ 1.27
RTN4-201ENST00000317610 SRGAP3O43295 1099 aa22.97■■□□□ 1.27
RTN4-201ENST00000317610 F13A1P00488 732 aa22.97■■□□□ 1.27
RTN4-201ENST00000317610 KDM3BQ7LBC6 1761 aa22.96■■□□□ 1.27
RTN4-201ENST00000317610 ATP6V1DQ9Y5K8 247 aa22.96■■□□□ 1.27
RTN4-201ENST00000317610 TTC41PQ6P2S7 1318 aa22.96■■□□□ 1.27
RTN4-201ENST00000317610 HSP90AB4PQ58FF6 505 aa22.96■■□□□ 1.27
RTN4-201ENST00000317610 PIBF1Q8WXW3 757 aa22.96■■□□□ 1.27
RTN4-201ENST00000317610 AMOTL2Q9Y2J4 779 aa22.96■■□□□ 1.27
RTN4-201ENST00000317610 HOXB7P09629 217 aa22.95■■□□□ 1.26
RTN4-201ENST00000317610 NLRP6P59044 892 aa22.94■■□□□ 1.26
RTN4-201ENST00000317610 BEND3Q5T5X7 828 aa22.94■■□□□ 1.26
RTN4-201ENST00000317610 KCNB2Q92953 911 aa22.94■■□□□ 1.26
RTN4-201ENST00000317610 SLC26A8Q96RN1 970 aa22.94■■□□□ 1.26
RTN4-201ENST00000317610 FUCA2Q9BTY2 467 aa22.94■■□□□ 1.26
RTN4-201ENST00000317610 USP25Q9UHP3 1055 aa22.94■■□□□ 1.26
RTN4-201ENST00000317610 SMC3Q9UQE7 1217 aa22.94■■□□□ 1.26
RTN4-201ENST00000317610 ANKARQ7Z5J8 1434 aa22.94■■□□□ 1.26
RTN4-201ENST00000317610 NBPF7P0C2Y1 421 aaPredicted RBP22.94■■□□□ 1.26
RTN4-201ENST00000317610 PKNOX2Q96KN3 472 aa22.93■■□□□ 1.26
RTN4-201ENST00000317610 HYPKQ9NX55 129 aa22.93■■□□□ 1.26
RTN4-201ENST00000317610 GLRX3O76003 335 aaKnown RBP22.93■■□□□ 1.26
RTN4-201ENST00000317610 ADCY5O95622 1261 aa22.93■■□□□ 1.26
RTN4-201ENST00000317610 SLIT1O75093 1534 aa22.92■■□□□ 1.26
RTN4-201ENST00000317610 TM6SF1Q9BZW5 370 aa22.92■■□□□ 1.26
RTN4-201ENST00000317610 TBX22Q9Y458 520 aa22.92■■□□□ 1.26
RTN4-201ENST00000317610 ARHGAP23Q9P227 1491 aa22.92■■□□□ 1.26
RTN4-201ENST00000317610 CHD2O14647 1828 aaKnown RBP22.92■■□□□ 1.26
RTN4-201ENST00000317610 VPS53Q5VIR6 699 aa22.92■■□□□ 1.26
RTN4-201ENST00000317610 CWC27Q6UX04 472 aaKnown RBP22.92■■□□□ 1.26
RTN4-201ENST00000317610 DNAAF4Q8WXU2 420 aa22.92■■□□□ 1.26
RTN4-201ENST00000317610 HCLS1P14317 486 aaPredicted RBP22.91■■□□□ 1.26
RTN4-201ENST00000317610 EIF4A1P60842 406 aaKnown RBP22.91■■□□□ 1.26
RTN4-201ENST00000317610 MTX1Q13505 466 aa22.91■■□□□ 1.26
RTN4-201ENST00000317610 MYRIPQ8NFW9 859 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 382 ms