RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 SFPQP23246 707 aaKnown RBP eCLIP15.18■□□□□ 0.02
AFF3-201ENST00000317233 BLOC1S2Q6QNY1 142 aa15.18■□□□□ 0.02
AFF3-201ENST00000317233 CEP120Q8N960 986 aa15.18■□□□□ 0.02
AFF3-201ENST00000317233 NUP62CLQ9H1M0 184 aa15.18■□□□□ 0.02
AFF3-201ENST00000317233 CCDC196A0A1B0GTZ2 297 aa15.18■□□□□ 0.02
AFF3-201ENST00000317233 ZFYP08048 801 aaPredicted RBP15.18■□□□□ 0.02
AFF3-201ENST00000317233 PTPN14Q15678 1187 aa15.18■□□□□ 0.02
AFF3-201ENST00000317233 PHAXQ9H814 394 aaKnown RBP15.18■□□□□ 0.02
AFF3-201ENST00000317233 CALCOCO1Q9P1Z2 691 aa15.18■□□□□ 0.02
AFF3-201ENST00000317233 APAF1O14727 1248 aa15.18■□□□□ 0.02
AFF3-201ENST00000317233 SARNPP82979 210 aaKnown RBP15.17■□□□□ 0.02
AFF3-201ENST00000317233 MIPOL1Q8TD10 442 aa15.17■□□□□ 0.02
AFF3-201ENST00000317233 TATP17735 454 aaPredicted RBP15.17■□□□□ 0.02
AFF3-201ENST00000317233 CNGA1P29973 690 aa15.17■□□□□ 0.02
AFF3-201ENST00000317233 GAS2L2Q8NHY3 880 aa15.17■□□□□ 0.02
AFF3-201ENST00000317233 NLRP5P59047 1200 aa15.17■□□□□ 0.02
AFF3-201ENST00000317233 SLF2Q8IX21 1173 aa15.17■□□□□ 0.02
AFF3-201ENST00000317233 CKAP2LQ8IYA6 745 aa15.17■□□□□ 0.02
AFF3-201ENST00000317233 SMARCC1Q92922 1105 aaPredicted RBP15.17■□□□□ 0.02
AFF3-201ENST00000317233 AIDAQ96BJ3 306 aa15.17■□□□□ 0.02
AFF3-201ENST00000317233 CAVIN4Q5BKX8 364 aa15.17■□□□□ 0.02
AFF3-201ENST00000317233 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
AFF3-201ENST00000317233 ZPR1O75312 459 aa15.17■□□□□ 0.02
AFF3-201ENST00000317233 VIMP08670 466 aaKnown RBP15.16■□□□□ 0.02
AFF3-201ENST00000317233 XPCQ01831 940 aaPredicted RBP15.16■□□□□ 0.02
AFF3-201ENST00000317233 KRT32Q14532 448 aa15.16■□□□□ 0.02
AFF3-201ENST00000317233 CFAP157Q5JU67 520 aa15.16■□□□□ 0.02
AFF3-201ENST00000317233 USP37Q86T82 979 aa15.16■□□□□ 0.02
AFF3-201ENST00000317233 A0A087WZG4 1122 aa15.16■□□□□ 0.02
AFF3-201ENST00000317233 ZNF444Q8N0Y2 327 aaPredicted RBP15.16■□□□□ 0.02
AFF3-201ENST00000317233 ATP2A1O14983 1001 aa15.16■□□□□ 0.02
AFF3-201ENST00000317233 DDX54Q8TDD1 881 aaKnown RBP15.16■□□□□ 0.02
AFF3-201ENST00000317233 MNAT1P51948 309 aa15.16■□□□□ 0.02
AFF3-201ENST00000317233 AMPD3Q01432 767 aa15.16■□□□□ 0.02
AFF3-201ENST00000317233 TACC3Q9Y6A5 838 aa15.16■□□□□ 0.02
AFF3-201ENST00000317233 FLIIQ13045 1269 aa15.16■□□□□ 0.02
AFF3-201ENST00000317233 PPFIA2O75334 1257 aa15.15■□□□□ 0.02
AFF3-201ENST00000317233 TOM1L2Q6ZVM7 507 aa15.15■□□□□ 0.02
AFF3-201ENST00000317233 TRMT1LQ7Z2T5 733 aaKnown RBP15.15■□□□□ 0.02
AFF3-201ENST00000317233 CALML4Q96GE6 196 aa15.15■□□□□ 0.02
AFF3-201ENST00000317233 YEATS4O95619 227 aa15.15■□□□□ 0.02
AFF3-201ENST00000317233 TOP1P11387 765 aaKnown RBP15.15■□□□□ 0.02
AFF3-201ENST00000317233 HNRNPMP52272 730 aaKnown RBP eCLIP15.15■□□□□ 0.02
AFF3-201ENST00000317233 DNAAF4Q8WXU2 420 aa15.15■□□□□ 0.02
AFF3-201ENST00000317233 SWAP70Q9UH65 585 aa15.15■□□□□ 0.02
AFF3-201ENST00000317233 GRM1Q13255 1194 aa15.15■□□□□ 0.02
AFF3-201ENST00000317233 HSF2BPO75031 334 aa15.15■□□□□ 0.02
AFF3-201ENST00000317233 MYL6BP14649 208 aa15.15■□□□□ 0.02
AFF3-201ENST00000317233 TBC1D31Q96DN5 1066 aa15.15■□□□□ 0.02
AFF3-201ENST00000317233 ZBTB24O43167 697 aaPredicted RBP15.14■□□□□ 0.01
AFF3-201ENST00000317233 ATF7IPQ6VMQ6 1270 aa15.14■□□□□ 0.01
AFF3-201ENST00000317233 EXOC6Q8TAG9 804 aa15.14■□□□□ 0.01
AFF3-201ENST00000317233 WHAMMQ8TF30 809 aa15.14■□□□□ 0.01
AFF3-201ENST00000317233 MINDY4BA8MYZ0 360 aa15.14■□□□□ 0.01
AFF3-201ENST00000317233 PHACTR2O75167 634 aa15.14■□□□□ 0.01
AFF3-201ENST00000317233 RFC1P35251 1148 aaPredicted RBP15.14■□□□□ 0.01
AFF3-201ENST00000317233 SIRT1Q96EB6 747 aa15.14■□□□□ 0.01
AFF3-201ENST00000317233 RAB3IPQ96QF0 476 aaPredicted RBP15.14■□□□□ 0.01
AFF3-201ENST00000317233 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
AFF3-201ENST00000317233 POTEB2H3BUK9 544 aa15.14■□□□□ 0.01
AFF3-201ENST00000317233 IDH1O75874 414 aaKnown RBP15.14■□□□□ 0.01
AFF3-201ENST00000317233 NLRP6P59044 892 aa15.14■□□□□ 0.01
AFF3-201ENST00000317233 MTIF2P46199 727 aaKnown RBP15.14■□□□□ 0.01
AFF3-201ENST00000317233 STMN4Q9H169 189 aaPredicted RBP15.14■□□□□ 0.01
AFF3-201ENST00000317233 GSTA5Q7RTV2 222 aa15.13■□□□□ 0.01
AFF3-201ENST00000317233 STIM2Q9P246 746 aa15.13■□□□□ 0.01
AFF3-201ENST00000317233 RASAL2Q9UJF2 1139 aa15.13■□□□□ 0.01
AFF3-201ENST00000317233 GIPC1O14908 333 aa15.13■□□□□ 0.01
AFF3-201ENST00000317233 TACC1O75410 805 aa15.13■□□□□ 0.01
AFF3-201ENST00000317233 ANKFY1Q9P2R3 1169 aa15.13■□□□□ 0.01
AFF3-201ENST00000317233 MGEA5O60502 916 aa15.13■□□□□ 0.01
AFF3-201ENST00000317233 URI1O94763 535 aaPredicted RBP15.13■□□□□ 0.01
AFF3-201ENST00000317233 TRIM7Q9C029 511 aa15.13■□□□□ 0.01
AFF3-201ENST00000317233 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
AFF3-201ENST00000317233 MAP3K11Q16584 847 aa15.13■□□□□ 0.01
AFF3-201ENST00000317233 IQCA1Q86XH1 822 aa15.13■□□□□ 0.01
AFF3-201ENST00000317233 CTCFLQ8NI51 663 aaPredicted RBP15.13■□□□□ 0.01
AFF3-201ENST00000317233 JADE2Q9NQC1 790 aa15.12■□□□□ 0.01
AFF3-201ENST00000317233 CEP126Q9P2H0 1117 aa15.12■□□□□ 0.01
AFF3-201ENST00000317233 CGNQ9P2M7 1197 aaKnown RBP15.12■□□□□ 0.01
AFF3-201ENST00000317233 MPNDQ8N594 471 aa15.12■□□□□ 0.01
AFF3-201ENST00000317233 SELENOOQ9BVL4 669 aa15.12■□□□□ 0.01
AFF3-201ENST00000317233 U3KPZ7 1027 aaPredicted RBP15.12■□□□□ 0.01
AFF3-201ENST00000317233 KMT5BQ4FZB7 885 aa15.12■□□□□ 0.01
AFF3-201ENST00000317233 STMN1P16949 149 aa15.12■□□□□ 0.01
AFF3-201ENST00000317233 PRR16Q569H4 304 aa15.12■□□□□ 0.01
AFF3-201ENST00000317233 SRCIN1Q9C0H9 1055 aa15.12■□□□□ 0.01
AFF3-201ENST00000317233 BICDL1Q6ZP65 573 aa15.12■□□□□ 0.01
AFF3-201ENST00000317233 MSL1Q68DK7 614 aa15.11■□□□□ 0.01
AFF3-201ENST00000317233 ERCC3P19447 782 aa15.11■□□□□ 0.01
AFF3-201ENST00000317233 SEPT14Q6ZU15 432 aa15.11■□□□□ 0.01
AFF3-201ENST00000317233 CCDC77Q9BR77 488 aa15.11■□□□□ 0.01
AFF3-201ENST00000317233 VPS52Q8N1B4 723 aa15.11■□□□□ 0.01
AFF3-201ENST00000317233 TTC14Q96N46 770 aa15.11■□□□□ 0.01
AFF3-201ENST00000317233 CCDC40Q4G0X9 1142 aa15.11■□□□□ 0.01
AFF3-201ENST00000317233 PPFIBP2Q8ND30 876 aa15.11■□□□□ 0.01
AFF3-201ENST00000317233 GSDMBQ8TAX9 411 aa15.11■□□□□ 0.01
AFF3-201ENST00000317233 NUF2Q9BZD4 464 aa15.11■□□□□ 0.01
AFF3-201ENST00000317233 MYO1BO43795 1136 aa15.11■□□□□ 0.01
AFF3-201ENST00000317233 IMPG2Q9BZV3 1241 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms