RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 PNMA6EA0A0J9YXQ4 647 aa19.63■□□□□ 0.73
CACFD1-202ENST00000316948 MAP4K4O95819 1239 aaPredicted RBP19.63■□□□□ 0.73
CACFD1-202ENST00000316948 HDGFP51858 240 aaKnown RBP19.63■□□□□ 0.73
CACFD1-202ENST00000316948 GIMAP6Q6P9H5 292 aa19.63■□□□□ 0.73
CACFD1-202ENST00000316948 ATP2B3Q16720 1220 aa19.62■□□□□ 0.73
CACFD1-202ENST00000316948 KDM4AO75164 1064 aa19.62■□□□□ 0.73
CACFD1-202ENST00000316948 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.62■□□□□ 0.73
CACFD1-202ENST00000316948 FKBP5Q13451 457 aaPredicted RBP19.61■□□□□ 0.73
CACFD1-202ENST00000316948 SPC24Q8NBT2 197 aa19.61■□□□□ 0.73
CACFD1-202ENST00000316948 BCL2L12Q9HB09 334 aa19.61■□□□□ 0.73
CACFD1-202ENST00000316948 RGPD1P0DJD0 1748 aa19.61■□□□□ 0.73
CACFD1-202ENST00000316948 PLEKHG3A1L390 1219 aa19.61■□□□□ 0.73
CACFD1-202ENST00000316948 SPDYE4A6NLX3 237 aa19.61■□□□□ 0.73
CACFD1-202ENST00000316948 STK31Q9BXU1 1019 aa19.61■□□□□ 0.73
CACFD1-202ENST00000316948 SALL3Q9BXA9 1300 aa19.61■□□□□ 0.73
CACFD1-202ENST00000316948 GTF2F1P35269 517 aaKnown RBP eCLIP19.61■□□□□ 0.73
CACFD1-202ENST00000316948 IL1RAPL2Q9NP60 686 aa19.61■□□□□ 0.73
CACFD1-202ENST00000316948 RPAP1Q9BWH6 1393 aaPredicted RBP19.6■□□□□ 0.73
CACFD1-202ENST00000316948 DIP2BQ9P265 1576 aa19.6■□□□□ 0.73
CACFD1-202ENST00000316948 ZSCAN22P10073 491 aaPredicted RBP19.6■□□□□ 0.73
CACFD1-202ENST00000316948 FLIIQ13045 1269 aa19.6■□□□□ 0.73
CACFD1-202ENST00000316948 EYA1Q99502 592 aa19.6■□□□□ 0.73
CACFD1-202ENST00000316948 SPTLC3Q9NUV7 552 aa19.6■□□□□ 0.73
CACFD1-202ENST00000316948 PYCARDQ9ULZ3 195 aa19.59■□□□□ 0.73
CACFD1-202ENST00000316948 USP31Q70CQ4 1352 aa19.59■□□□□ 0.73
CACFD1-202ENST00000316948 UBE2HP62256 183 aa19.59■□□□□ 0.73
CACFD1-202ENST00000316948 ARHGEF10O15013 1369 aa19.59■□□□□ 0.73
CACFD1-202ENST00000316948 AP5Z1O43299 807 aa19.58■□□□□ 0.73
CACFD1-202ENST00000316948 NUTM1Q86Y26 1132 aa19.58■□□□□ 0.73
CACFD1-202ENST00000316948 SLC26A8Q96RN1 970 aa19.58■□□□□ 0.73
CACFD1-202ENST00000316948 TMEM2Q9UHN6 1383 aa19.58■□□□□ 0.73
CACFD1-202ENST00000316948 LETM1O95202 739 aaPredicted RBP19.58■□□□□ 0.72
CACFD1-202ENST00000316948 SYT1P21579 422 aa19.58■□□□□ 0.72
CACFD1-202ENST00000316948 AMPHP49418 695 aa19.58■□□□□ 0.72
CACFD1-202ENST00000316948 STX6O43752 255 aa19.57■□□□□ 0.72
CACFD1-202ENST00000316948 UTP14CQ5TAP6 766 aaKnown RBP19.57■□□□□ 0.72
CACFD1-202ENST00000316948 TMEM87AQ8NBN3 555 aa19.57■□□□□ 0.72
CACFD1-202ENST00000316948 PODXL2Q9NZ53 605 aa19.57■□□□□ 0.72
CACFD1-202ENST00000316948 ADAMTS13Q76LX8 1427 aa19.57■□□□□ 0.72
CACFD1-202ENST00000316948 HSPA4P34932 840 aa19.57■□□□□ 0.72
CACFD1-202ENST00000316948 PDCL2Q8N4E4 241 aa19.57■□□□□ 0.72
CACFD1-202ENST00000316948 LRRFIP2Q9Y608 721 aaKnown RBP19.57■□□□□ 0.72
CACFD1-202ENST00000316948 NALCNQ8IZF0 1738 aa19.56■□□□□ 0.72
CACFD1-202ENST00000316948 RIOK3O14730 519 aaKnown RBP19.56■□□□□ 0.72
CACFD1-202ENST00000316948 LTKP29376 864 aa19.56■□□□□ 0.72
CACFD1-202ENST00000316948 KCNF1Q9H3M0 494 aa19.56■□□□□ 0.72
CACFD1-202ENST00000316948 CEP170BQ9Y4F5 1589 aaPredicted RBP19.56■□□□□ 0.72
CACFD1-202ENST00000316948 TNRQ92752 1358 aa19.56■□□□□ 0.72
CACFD1-202ENST00000316948 CPA1P15085 419 aa19.56■□□□□ 0.72
CACFD1-202ENST00000316948 CHAF1AQ13111 956 aaPredicted RBP19.56■□□□□ 0.72
CACFD1-202ENST00000316948 AK2P54819 239 aa19.55■□□□□ 0.72
CACFD1-202ENST00000316948 KIAA1524Q8TCG1 905 aa19.55■□□□□ 0.72
CACFD1-202ENST00000316948 SMC3Q9UQE7 1217 aa19.55■□□□□ 0.72
CACFD1-202ENST00000316948 TCHHQ07283 1943 aa19.55■□□□□ 0.72
CACFD1-202ENST00000316948 FLT4P35916 1363 aa19.55■□□□□ 0.72
CACFD1-202ENST00000316948 ATP8B2P98198 1209 aa19.55■□□□□ 0.72
CACFD1-202ENST00000316948 F13A1P00488 732 aa19.55■□□□□ 0.72
CACFD1-202ENST00000316948 GNAI3P08754 354 aa19.55■□□□□ 0.72
CACFD1-202ENST00000316948 CHMP3Q9Y3E7 222 aa19.55■□□□□ 0.72
CACFD1-202ENST00000316948 TOPAZ1Q8N9V7 1692 aa19.54■□□□□ 0.72
CACFD1-202ENST00000316948 DNM1Q05193 864 aaKnown RBP19.54■□□□□ 0.72
CACFD1-202ENST00000316948 CCDC30Q5VVM6 783 aa19.54■□□□□ 0.72
CACFD1-202ENST00000316948 NGDNQ8NEJ9 315 aaKnown RBP19.54■□□□□ 0.72
CACFD1-202ENST00000316948 SNX14Q9Y5W7 946 aa19.54■□□□□ 0.72
CACFD1-202ENST00000316948 SSH2Q76I76 1423 aa19.54■□□□□ 0.72
CACFD1-202ENST00000316948 SBNO1A3KN83 1393 aa19.53■□□□□ 0.72
CACFD1-202ENST00000316948 KDRP35968 1356 aa19.53■□□□□ 0.72
CACFD1-202ENST00000316948 A0A0U1RQG5 324 aaPredicted RBP19.53■□□□□ 0.72
CACFD1-202ENST00000316948 IGSF3O75054 1194 aa19.53■□□□□ 0.72
CACFD1-202ENST00000316948 U2AF2P26368 475 aaKnown RBP eCLIP19.53■□□□□ 0.72
CACFD1-202ENST00000316948 NUTM2GQ5VZR2 741 aa19.53■□□□□ 0.72
CACFD1-202ENST00000316948 RUFY3Q7L099 469 aa19.53■□□□□ 0.72
CACFD1-202ENST00000316948 RASEFQ8IZ41 740 aa19.53■□□□□ 0.72
CACFD1-202ENST00000316948 DIAPH3Q9NSV4 1193 aa19.53■□□□□ 0.72
CACFD1-202ENST00000316948 STAP2Q9UGK3 403 aa19.53■□□□□ 0.72
CACFD1-202ENST00000316948 IGSF1Q8N6C5 1336 aa19.52■□□□□ 0.72
CACFD1-202ENST00000316948 PLEKHG5O94827 1062 aa19.52■□□□□ 0.72
CACFD1-202ENST00000316948 LIMCH1Q9UPQ0 1083 aa19.52■□□□□ 0.72
CACFD1-202ENST00000316948 FMN2Q9NZ56 1722 aa19.52■□□□□ 0.72
CACFD1-202ENST00000316948 FUCA2Q9BTY2 467 aa19.52■□□□□ 0.72
CACFD1-202ENST00000316948 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.52■□□□□ 0.72
CACFD1-202ENST00000316948 TUBGCP6Q96RT7 1819 aa19.52■□□□□ 0.71
CACFD1-202ENST00000316948 CCDC83Q8IWF9 413 aa19.51■□□□□ 0.71
CACFD1-202ENST00000316948 GNAT3A8MTJ3 354 aa19.51■□□□□ 0.71
CACFD1-202ENST00000316948 LARGE1O95461 756 aa19.51■□□□□ 0.71
CACFD1-202ENST00000316948 CEBPAP49715 358 aaPredicted RBP19.51■□□□□ 0.71
CACFD1-202ENST00000316948 USP44Q9H0E7 712 aa19.51■□□□□ 0.71
CACFD1-202ENST00000316948 ATP6V1DQ9Y5K8 247 aa19.51■□□□□ 0.71
CACFD1-202ENST00000316948 LTV1Q96GA3 475 aaPredicted RBP19.5■□□□□ 0.71
CACFD1-202ENST00000316948 SPG7Q9UQ90 795 aa19.5■□□□□ 0.71
CACFD1-202ENST00000316948 VPS37CA5D8V6 355 aaPredicted RBP19.5■□□□□ 0.71
CACFD1-202ENST00000316948 TTC14Q96N46 770 aa19.5■□□□□ 0.71
CACFD1-202ENST00000316948 PTPRUQ92729 1446 aa19.5■□□□□ 0.71
CACFD1-202ENST00000316948 CWC27Q6UX04 472 aaKnown RBP19.49■□□□□ 0.71
CACFD1-202ENST00000316948 IL17REQ8NFR9 667 aa19.49■□□□□ 0.71
CACFD1-202ENST00000316948 IL17RAQ96F46 866 aa19.49■□□□□ 0.71
CACFD1-202ENST00000316948 GTPBP4Q9BZE4 634 aaKnown RBP19.49■□□□□ 0.71
CACFD1-202ENST00000316948 TTC21AQ8NDW8 1320 aa19.49■□□□□ 0.71
CACFD1-202ENST00000316948 UBR1Q8IWV7 1749 aa19.49■□□□□ 0.71
CACFD1-202ENST00000316948 UBTFL1P0CB47 393 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 570.3 ms