RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 ESYT1Q9BSJ8 1104 aa23.92■■□□□ 1.42
AP3S1-201ENST00000316788 USP44Q9H0E7 712 aa23.92■■□□□ 1.42
AP3S1-201ENST00000316788 LMO7Q8WWI1 1683 aa23.92■■□□□ 1.42
AP3S1-201ENST00000316788 UBTFL1P0CB47 393 aaPredicted RBP23.91■■□□□ 1.42
AP3S1-201ENST00000316788 FBXO41Q8TF61 875 aa23.91■■□□□ 1.42
AP3S1-201ENST00000316788 TNS3Q68CZ2 1445 aa23.91■■□□□ 1.42
AP3S1-201ENST00000316788 KLHL40Q2TBA0 621 aa23.9■■□□□ 1.42
AP3S1-201ENST00000316788 FOXD4L1Q9NU39 408 aa23.9■■□□□ 1.42
AP3S1-201ENST00000316788 LRRFIP2Q9Y608 721 aaKnown RBP23.9■■□□□ 1.42
AP3S1-201ENST00000316788 MCCP23508 829 aa23.9■■□□□ 1.42
AP3S1-201ENST00000316788 POLA2Q14181 598 aa23.9■■□□□ 1.42
AP3S1-201ENST00000316788 ALS2Q96Q42 1657 aa23.89■■□□□ 1.42
AP3S1-201ENST00000316788 EIF4A1P60842 406 aaKnown RBP23.89■■□□□ 1.41
AP3S1-201ENST00000316788 SLIT3O75094 1523 aa23.88■■□□□ 1.41
AP3S1-201ENST00000316788 CABLES1Q8TDN4 633 aa23.87■■□□□ 1.41
AP3S1-201ENST00000316788 LRRC59Q96AG4 307 aaKnown RBP23.87■■□□□ 1.41
AP3S1-201ENST00000316788 LTV1Q96GA3 475 aaPredicted RBP23.87■■□□□ 1.41
AP3S1-201ENST00000316788 CHMLP26374 656 aa23.87■■□□□ 1.41
AP3S1-201ENST00000316788 AKAP4Q5JQC9 854 aa23.87■■□□□ 1.41
AP3S1-201ENST00000316788 AMOTQ4VCS5 1084 aa23.85■■□□□ 1.41
AP3S1-201ENST00000316788 NBPF6Q5VWK0 638 aa23.85■■□□□ 1.41
AP3S1-201ENST00000316788 NBPF4Q96M43 638 aa23.85■■□□□ 1.41
AP3S1-201ENST00000316788 CAMTA1Q9Y6Y1 1673 aa23.84■■□□□ 1.41
AP3S1-201ENST00000316788 PLEKHO1Q53GL0 409 aaPredicted RBP23.84■■□□□ 1.41
AP3S1-201ENST00000316788 USHBP1Q8N6Y0 703 aa23.83■■□□□ 1.41
AP3S1-201ENST00000316788 NECTIN2Q92692 538 aa23.83■■□□□ 1.41
AP3S1-201ENST00000316788 PANK2Q9BZ23 570 aa23.83■■□□□ 1.41
AP3S1-201ENST00000316788 CUL4AQ13619 759 aa23.82■■□□□ 1.4
AP3S1-201ENST00000316788 HSP90AB4PQ58FF6 505 aa23.82■■□□□ 1.4
AP3S1-201ENST00000316788 PHAXQ9H814 394 aaKnown RBP23.82■■□□□ 1.4
AP3S1-201ENST00000316788 BEND3Q5T5X7 828 aa23.81■■□□□ 1.4
AP3S1-201ENST00000316788 DNAAF4Q8WXU2 420 aa23.81■■□□□ 1.4
AP3S1-201ENST00000316788 KIF1BPQ96EK5 621 aa23.81■■□□□ 1.4
AP3S1-201ENST00000316788 INTS4Q96HW7 963 aaKnown RBP23.81■■□□□ 1.4
AP3S1-201ENST00000316788 USP42Q9H9J4 1324 aaKnown RBP23.81■■□□□ 1.4
AP3S1-201ENST00000316788 MTX1Q13505 466 aa23.8■■□□□ 1.4
AP3S1-201ENST00000316788 DDX49Q9Y6V7 483 aaKnown RBP23.8■■□□□ 1.4
AP3S1-201ENST00000316788 PPP1R42Q7Z4L9 355 aa23.79■■□□□ 1.4
AP3S1-201ENST00000316788 HEG1Q9ULI3 1381 aa23.79■■□□□ 1.4
AP3S1-201ENST00000316788 ZNF445P59923 1031 aa23.79■■□□□ 1.4
AP3S1-201ENST00000316788 TEFQ10587 303 aa23.79■■□□□ 1.4
AP3S1-201ENST00000316788 ARHGEF25Q86VW2 580 aa23.79■■□□□ 1.4
AP3S1-201ENST00000316788 GAS2L3Q86XJ1 694 aa23.79■■□□□ 1.4
AP3S1-201ENST00000316788 RRAGDQ9NQL2 400 aaPredicted RBP23.79■■□□□ 1.4
AP3S1-201ENST00000316788 LMBRD1Q9NUN5 540 aa23.79■■□□□ 1.4
AP3S1-201ENST00000316788 HDAC5Q9UQL6 1122 aa23.79■■□□□ 1.4
AP3S1-201ENST00000316788 TRIM6-TRIM34B2RNG4 842 aa23.78■■□□□ 1.4
AP3S1-201ENST00000316788 NEK4P51957 841 aa23.78■■□□□ 1.4
AP3S1-201ENST00000316788 ZNF530Q6P9A1 599 aaPredicted RBP23.78■■□□□ 1.4
AP3S1-201ENST00000316788 RHPN1Q8TCX5 695 aa23.78■■□□□ 1.4
AP3S1-201ENST00000316788 TMX3Q96JJ7 454 aa23.78■■□□□ 1.4
AP3S1-201ENST00000316788 LGR6Q9HBX8 967 aa23.78■■□□□ 1.4
AP3S1-201ENST00000316788 ALDH1L1O75891 902 aa23.77■■□□□ 1.4
AP3S1-201ENST00000316788 CHPF2Q9P2E5 772 aa23.77■■□□□ 1.4
AP3S1-201ENST00000316788 CRYBG1Q9Y4K1 1723 aa23.77■■□□□ 1.4
AP3S1-201ENST00000316788 ADAMTS7Q9UKP4 1686 aa23.77■■□□□ 1.39
AP3S1-201ENST00000316788 TSHZ3Q63HK5 1081 aa23.76■■□□□ 1.39
AP3S1-201ENST00000316788 ZGPATQ8N5A5 531 aaKnown RBP23.76■■□□□ 1.39
AP3S1-201ENST00000316788 RILPL2Q969X0 211 aa23.76■■□□□ 1.39
AP3S1-201ENST00000316788 DBF4Q9UBU7 674 aaPredicted RBP23.76■■□□□ 1.39
AP3S1-201ENST00000316788 JCADQ9P266 1359 aa23.76■■□□□ 1.39
AP3S1-201ENST00000316788 BTBD11A6QL63 1104 aa23.76■■□□□ 1.39
AP3S1-201ENST00000316788 RNMTO43148 476 aaKnown RBP23.76■■□□□ 1.39
AP3S1-201ENST00000316788 SURF6O75683 361 aaKnown RBP23.76■■□□□ 1.39
AP3S1-201ENST00000316788 MCTP1Q6DN14 999 aa23.76■■□□□ 1.39
AP3S1-201ENST00000316788 PI4K2BQ8TCG2 481 aa23.76■■□□□ 1.39
AP3S1-201ENST00000316788 ANO2Q9NQ90 1003 aa23.76■■□□□ 1.39
AP3S1-201ENST00000316788 ZDHHC9Q9Y397 364 aa23.76■■□□□ 1.39
AP3S1-201ENST00000316788 ADCY9O60503 1353 aa23.76■■□□□ 1.39
AP3S1-201ENST00000316788 GCP02774 474 aa23.75■■□□□ 1.39
AP3S1-201ENST00000316788 TTC41PQ6P2S7 1318 aa23.74■■□□□ 1.39
AP3S1-201ENST00000316788 NUTM2BA6NNL0 878 aaPredicted RBP23.74■■□□□ 1.39
AP3S1-201ENST00000316788 NUTM2EB1AL46 878 aaPredicted RBP23.74■■□□□ 1.39
AP3S1-201ENST00000316788 NUTM2AQ8IVF1 878 aaPredicted RBP23.74■■□□□ 1.39
AP3S1-201ENST00000316788 ARXQ96QS3 562 aa23.74■■□□□ 1.39
AP3S1-201ENST00000316788 PI4KAP2A4QPH2 592 aa23.73■■□□□ 1.39
AP3S1-201ENST00000316788 SRGAP3O43295 1099 aa23.73■■□□□ 1.39
AP3S1-201ENST00000316788 EIF2S2P20042 333 aaKnown RBP23.73■■□□□ 1.39
AP3S1-201ENST00000316788 HSPA4P34932 840 aa23.73■■□□□ 1.39
AP3S1-201ENST00000316788 CLCN1P35523 988 aa23.73■■□□□ 1.39
AP3S1-201ENST00000316788 PI4KAP1Q8N8J0 262 aa23.73■■□□□ 1.39
AP3S1-201ENST00000316788 COL22A1Q8NFW1 1626 aaPredicted RBP23.73■■□□□ 1.39
AP3S1-201ENST00000316788 ZC3H6P61129 1189 aaKnown RBP23.73■■□□□ 1.39
AP3S1-201ENST00000316788 C1orf141Q5JVX7 400 aa23.73■■□□□ 1.39
AP3S1-201ENST00000316788 UNC5CLQ8IV45 518 aa23.73■■□□□ 1.39
AP3S1-201ENST00000316788 PALD1Q9ULE6 856 aa23.73■■□□□ 1.39
AP3S1-201ENST00000316788 ABCA3Q99758 1704 aa23.72■■□□□ 1.39
AP3S1-201ENST00000316788 PLEKHG2Q9H7P9 1386 aa23.72■■□□□ 1.39
AP3S1-201ENST00000316788 PKP1Q13835 747 aa23.72■■□□□ 1.39
AP3S1-201ENST00000316788 BRD1O95696 1058 aa23.71■■□□□ 1.39
AP3S1-201ENST00000316788 NBPF7P0C2Y1 421 aaPredicted RBP23.71■■□□□ 1.39
AP3S1-201ENST00000316788 CNTROBQ8N137 903 aa23.71■■□□□ 1.39
AP3S1-201ENST00000316788 IL1RAPL2Q9NP60 686 aa23.71■■□□□ 1.39
AP3S1-201ENST00000316788 RGPD2P0DJD1 1756 aa23.71■■□□□ 1.39
AP3S1-201ENST00000316788 RAD50Q92878 1312 aa23.71■■□□□ 1.39
AP3S1-201ENST00000316788 SGSM2O43147 1006 aa23.7■■□□□ 1.39
AP3S1-201ENST00000316788 CCDC173Q0VFZ6 552 aa23.7■■□□□ 1.39
AP3S1-201ENST00000316788 ILDR1Q86SU0 546 aaPredicted RBP23.7■■□□□ 1.39
AP3S1-201ENST00000316788 PPP1R9BQ96SB3 815 aa23.7■■□□□ 1.39
AP3S1-201ENST00000316788 ABCC6O95255 1503 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms