RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 CPDO75976 1380 aa21.07■□□□□ 0.96
SCAMP4-201ENST00000316097 CLEC17AQ6ZS10 378 aa21.07■□□□□ 0.96
SCAMP4-201ENST00000316097 SIRT2Q8IXJ6 389 aa21.07■□□□□ 0.96
SCAMP4-201ENST00000316097 IBTKQ9P2D0 1353 aaPredicted RBP21.06■□□□□ 0.96
SCAMP4-201ENST00000316097 PDCL3Q9H2J4 239 aa21.06■□□□□ 0.96
SCAMP4-201ENST00000316097 NCLP19338 710 aaKnown RBP21.06■□□□□ 0.96
SCAMP4-201ENST00000316097 FKBP5Q13451 457 aaPredicted RBP21.06■□□□□ 0.96
SCAMP4-201ENST00000316097 CYP27B1O15528 508 aa21.05■□□□□ 0.96
SCAMP4-201ENST00000316097 FLIIQ13045 1269 aa21.05■□□□□ 0.96
SCAMP4-201ENST00000316097 INTS3Q68E01 1043 aaKnown RBP21.05■□□□□ 0.96
SCAMP4-201ENST00000316097 MCTP1Q6DN14 999 aa21.05■□□□□ 0.96
SCAMP4-201ENST00000316097 NFATC2IPQ8NCF5 419 aa21.05■□□□□ 0.96
SCAMP4-201ENST00000316097 CAMTA1Q9Y6Y1 1673 aa21.05■□□□□ 0.96
SCAMP4-201ENST00000316097 OFD1O75665 1012 aa21.05■□□□□ 0.96
SCAMP4-201ENST00000316097 PHKG2P15735 406 aa21.05■□□□□ 0.96
SCAMP4-201ENST00000316097 CDC45O75419 566 aa21.04■□□□□ 0.96
SCAMP4-201ENST00000316097 LARP1Q6PKG0 1096 aaKnown RBP21.04■□□□□ 0.96
SCAMP4-201ENST00000316097 MEIS3Q99687 375 aa21.04■□□□□ 0.96
SCAMP4-201ENST00000316097 PTPRCP08575 1304 aa21.04■□□□□ 0.96
SCAMP4-201ENST00000316097 CRYBG1Q9Y4K1 1723 aa21.04■□□□□ 0.96
SCAMP4-201ENST00000316097 CAVIN1Q6NZI2 390 aaKnown RBP21.04■□□□□ 0.96
SCAMP4-201ENST00000316097 BABAM1Q9NWV8 329 aa21.04■□□□□ 0.96
SCAMP4-201ENST00000316097 SPG7Q9UQ90 795 aa21.03■□□□□ 0.96
SCAMP4-201ENST00000316097 CHPF2Q9P2E5 772 aa21.03■□□□□ 0.96
SCAMP4-201ENST00000316097 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.02■□□□□ 0.96
SCAMP4-201ENST00000316097 EVA1CP58658 441 aa21.02■□□□□ 0.96
SCAMP4-201ENST00000316097 ZNF445P59923 1031 aa21.01■□□□□ 0.95
SCAMP4-201ENST00000316097 WDR17Q8IZU2 1322 aa21.01■□□□□ 0.95
SCAMP4-201ENST00000316097 CHMP4BQ9H444 224 aaKnown RBP21.01■□□□□ 0.95
SCAMP4-201ENST00000316097 LMO7Q8WWI1 1683 aa21.01■□□□□ 0.95
SCAMP4-201ENST00000316097 AK9Q5TCS8 1911 aa21.01■□□□□ 0.95
SCAMP4-201ENST00000316097 ZSCAN23Q3MJ62 389 aa21.01■□□□□ 0.95
SCAMP4-201ENST00000316097 IFNL2Q8IZJ0 200 aa21.01■□□□□ 0.95
SCAMP4-201ENST00000316097 FAM208AQ9UK61 1670 aaKnown RBP21■□□□□ 0.95
SCAMP4-201ENST00000316097 GSPT1P15170 499 aaKnown RBP21■□□□□ 0.95
SCAMP4-201ENST00000316097 KDM6AO15550 1401 aaPredicted RBP21■□□□□ 0.95
SCAMP4-201ENST00000316097 RBM10P98175 930 aaKnown RBP20.99■□□□□ 0.95
SCAMP4-201ENST00000316097 RABEP1Q15276 862 aa20.99■□□□□ 0.95
SCAMP4-201ENST00000316097 NUCB2P80303 420 aa20.99■□□□□ 0.95
SCAMP4-201ENST00000316097 GIGYF1O75420 1035 aaPredicted RBP20.98■□□□□ 0.95
SCAMP4-201ENST00000316097 PIP4K2BP78356 416 aa20.98■□□□□ 0.95
SCAMP4-201ENST00000316097 PKP1Q13835 747 aa20.98■□□□□ 0.95
SCAMP4-201ENST00000316097 PROSER3Q2NL68 480 aa20.98■□□□□ 0.95
SCAMP4-201ENST00000316097 DDX54Q8TDD1 881 aaKnown RBP20.98■□□□□ 0.95
SCAMP4-201ENST00000316097 SLC52A2Q9HAB3 445 aa20.98■□□□□ 0.95
SCAMP4-201ENST00000316097 LMBRD1Q9NUN5 540 aa20.98■□□□□ 0.95
SCAMP4-201ENST00000316097 BTG4Q9NY30 223 aa20.98■□□□□ 0.95
SCAMP4-201ENST00000316097 RBSNQ9H1K0 784 aa20.98■□□□□ 0.95
SCAMP4-201ENST00000316097 R3HCC1Q9Y3T6 440 aaKnown RBP20.98■□□□□ 0.95
SCAMP4-201ENST00000316097 COL5A2P05997 1499 aaPredicted RBP20.97■□□□□ 0.95
SCAMP4-201ENST00000316097 ZNF790Q6PG37 636 aa20.96■□□□□ 0.95
SCAMP4-201ENST00000316097 CYP2E1P05181 493 aaPredicted RBP20.95■□□□□ 0.94
SCAMP4-201ENST00000316097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.95■□□□□ 0.94
SCAMP4-201ENST00000316097 APBB1O00213 710 aa20.95■□□□□ 0.94
SCAMP4-201ENST00000316097 PLEKHM2Q8IWE5 1019 aa20.95■□□□□ 0.94
SCAMP4-201ENST00000316097 PRIM1P49642 420 aaKnown RBP20.94■□□□□ 0.94
SCAMP4-201ENST00000316097 ZCRB1Q8TBF4 217 aaKnown RBP20.94■□□□□ 0.94
SCAMP4-201ENST00000316097 PIP4K2AP48426 406 aaPredicted RBP20.94■□□□□ 0.94
SCAMP4-201ENST00000316097 HS1BP3Q53T59 392 aa20.94■□□□□ 0.94
SCAMP4-201ENST00000316097 RBM27Q9P2N5 1060 aaKnown RBP20.94■□□□□ 0.94
SCAMP4-201ENST00000316097 NOL7Q9UMY1 257 aaKnown RBP20.94■□□□□ 0.94
SCAMP4-201ENST00000316097 DCAF5Q96JK2 942 aa20.93■□□□□ 0.94
SCAMP4-201ENST00000316097 NHSL1Q5SYE7 1610 aa20.93■□□□□ 0.94
SCAMP4-201ENST00000316097 PRPF40AO75400 957 aaKnown RBP20.93■□□□□ 0.94
SCAMP4-201ENST00000316097 CCT4P50991 539 aaKnown RBP20.93■□□□□ 0.94
SCAMP4-201ENST00000316097 TERF1P54274 439 aa20.93■□□□□ 0.94
SCAMP4-201ENST00000316097 CEP85Q6P2H3 762 aa20.93■□□□□ 0.94
SCAMP4-201ENST00000316097 ZNF496Q96IT1 587 aaPredicted RBP20.93■□□□□ 0.94
SCAMP4-201ENST00000316097 PI4KAP2A4QPH2 592 aa20.92■□□□□ 0.94
SCAMP4-201ENST00000316097 PI4KAP1Q8N8J0 262 aa20.92■□□□□ 0.94
SCAMP4-201ENST00000316097 PDLIM2Q96JY6 352 aa20.92■□□□□ 0.94
SCAMP4-201ENST00000316097 FAM13BQ9NYF5 915 aa20.92■□□□□ 0.94
SCAMP4-201ENST00000316097 ROBO1Q9Y6N7 1651 aa20.92■□□□□ 0.94
SCAMP4-201ENST00000316097 ADAMTS2O95450 1211 aa20.92■□□□□ 0.94
SCAMP4-201ENST00000316097 IL2RBP14784 551 aa20.92■□□□□ 0.94
SCAMP4-201ENST00000316097 CABP4P57796 275 aa20.92■□□□□ 0.94
SCAMP4-201ENST00000316097 USP26Q9BXU7 913 aa20.92■□□□□ 0.94
SCAMP4-201ENST00000316097 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.92■□□□□ 0.94
SCAMP4-201ENST00000316097 KDM3BQ7LBC6 1761 aa20.92■□□□□ 0.94
SCAMP4-201ENST00000316097 CARD10Q9BWT7 1032 aa20.91■□□□□ 0.94
SCAMP4-201ENST00000316097 AIMP1Q12904 312 aaKnown RBP20.91■□□□□ 0.94
SCAMP4-201ENST00000316097 TTC22Q5TAA0 569 aa20.91■□□□□ 0.94
SCAMP4-201ENST00000316097 ZGPATQ8N5A5 531 aaKnown RBP20.91■□□□□ 0.94
SCAMP4-201ENST00000316097 LTBP4Q8N2S1 1624 aa20.91■□□□□ 0.94
SCAMP4-201ENST00000316097 ZNF500O60304 480 aaPredicted RBP20.91■□□□□ 0.94
SCAMP4-201ENST00000316097 SOS1Q07889 1333 aaPredicted RBP20.91■□□□□ 0.94
SCAMP4-201ENST00000316097 C16orf71Q8IYS4 520 aaPredicted RBP20.91■□□□□ 0.94
SCAMP4-201ENST00000316097 GPT2Q8TD30 523 aa20.91■□□□□ 0.94
SCAMP4-201ENST00000316097 OVOS2A0A0G2JMS6 1433 aa20.9■□□□□ 0.94
SCAMP4-201ENST00000316097 ANKRD44Q8N8A2 993 aa20.9■□□□□ 0.94
SCAMP4-201ENST00000316097 HOXB7P09629 217 aa20.9■□□□□ 0.94
SCAMP4-201ENST00000316097 ATP10DQ9P241 1426 aa20.89■□□□□ 0.94
SCAMP4-201ENST00000316097 HEG1Q9ULI3 1381 aa20.89■□□□□ 0.94
SCAMP4-201ENST00000316097 MYL6BP14649 208 aa20.89■□□□□ 0.93
SCAMP4-201ENST00000316097 DBF4Q9UBU7 674 aaPredicted RBP20.89■□□□□ 0.93
SCAMP4-201ENST00000316097 USP16Q9Y5T5 823 aa20.89■□□□□ 0.93
SCAMP4-201ENST00000316097 ABCA3Q99758 1704 aa20.89■□□□□ 0.93
SCAMP4-201ENST00000316097 NUTM2BA6NNL0 878 aaPredicted RBP20.89■□□□□ 0.93
SCAMP4-201ENST00000316097 NUTM2EB1AL46 878 aaPredicted RBP20.89■□□□□ 0.93
SCAMP4-201ENST00000316097 NUTM2AQ8IVF1 878 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms